RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 RFX1P22670 979 aa22.39■■□□□ 1.17
TSPAN4-206ENST00000397408 DDX6P26196 483 aaKnown RBP eCLIP22.39■■□□□ 1.177e-7■■■■□ 24.1
TSPAN4-206ENST00000397408 SLC8A3P57103 927 aa22.39■■□□□ 1.17
TSPAN4-206ENST00000397408 TPM4P67936 248 aa22.39■■□□□ 1.17
TSPAN4-206ENST00000397408 UBXN1Q04323 297 aa22.39■■□□□ 1.17
TSPAN4-206ENST00000397408 TANGO2Q6ICL3 276 aa22.39■■□□□ 1.17
TSPAN4-206ENST00000397408 SLC44A3Q8N4M1 653 aa22.39■■□□□ 1.17
TSPAN4-206ENST00000397408 MAB21L3Q8N8X9 362 aa22.39■■□□□ 1.17
TSPAN4-206ENST00000397408 SLC46A2Q9BY10 475 aa22.39■■□□□ 1.17
TSPAN4-206ENST00000397408 ZFP14Q9HCL3 533 aa22.39■■□□□ 1.17
TSPAN4-206ENST00000397408 PLCB1Q9NQ66 1216 aa22.39■■□□□ 1.17
TSPAN4-206ENST00000397408 TRPM5Q9NZQ8 1165 aa22.39■■□□□ 1.17
TSPAN4-206ENST00000397408 ZMYM5Q9UJ78 669 aa22.39■■□□□ 1.17
TSPAN4-206ENST00000397408 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.39■■□□□ 1.17
TSPAN4-206ENST00000397408 NUP210Q8TEM1 1887 aaPredicted RBP22.38■■□□□ 1.17
TSPAN4-206ENST00000397408 PI4K2BG5E9Z4 385 aa22.38■■□□□ 1.17
TSPAN4-206ENST00000397408 ECI2O75521 394 aa22.38■■□□□ 1.17
TSPAN4-206ENST00000397408 PNMA6AP0CW24 399 aaPredicted RBP22.38■■□□□ 1.17
TSPAN4-206ENST00000397408 UCHL3P15374 230 aa22.38■■□□□ 1.17
TSPAN4-206ENST00000397408 VIPR2P41587 438 aa22.38■■□□□ 1.17
TSPAN4-206ENST00000397408 BST2Q10589 180 aaKnown RBP22.38■■□□□ 1.17
TSPAN4-206ENST00000397408 SYCP1Q15431 976 aa22.38■■□□□ 1.17
TSPAN4-206ENST00000397408 LCLAT1Q6UWP7 414 aa22.38■■□□□ 1.17
TSPAN4-206ENST00000397408 MON1AQ86VX9 555 aa22.38■■□□□ 1.17
TSPAN4-206ENST00000397408 GPIHBP1Q8IV16 184 aa22.38■■□□□ 1.17
TSPAN4-206ENST00000397408 ARID3BQ8IVW6 561 aaPredicted RBP22.38■■□□□ 1.17
TSPAN4-206ENST00000397408 ELSPBP1Q96BH3 223 aa22.38■■□□□ 1.17
TSPAN4-206ENST00000397408 GANQ9H2C0 597 aa22.38■■□□□ 1.17
TSPAN4-206ENST00000397408 FBXO44Q9H4M3 255 aa22.38■■□□□ 1.17
TSPAN4-206ENST00000397408 TRPV4Q9HBA0 871 aa22.38■■□□□ 1.17
TSPAN4-206ENST00000397408 FAM207AQ9NSI2 230 aaPredicted RBP22.38■■□□□ 1.17
TSPAN4-206ENST00000397408 COMMD8Q9NX08 183 aa22.38■■□□□ 1.17
TSPAN4-206ENST00000397408 IL37Q9NZH6 218 aa22.38■■□□□ 1.17
TSPAN4-206ENST00000397408 SIK3Q9Y2K2 1263 aa22.38■■□□□ 1.17
TSPAN4-206ENST00000397408 MYO16Q9Y6X6 1858 aa22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 ANAPC1Q9H1A4 1944 aa22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 TRIOO75962 3097 aa22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 ZNF840PA6NDX5 716 aa22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 GOLGA6L19H0YKK7 550 aa22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 M0QYV0 167 aa22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 PRAMEF12O95522 483 aa22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 AVPR1AP37288 418 aa22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 PPP3CCP48454 512 aa22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 ZXDAP98168 799 aa22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 PDE4CQ08493 712 aa22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 STILQ15468 1287 aa22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 CNGA2Q16280 664 aa22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 LRSAM1Q6UWE0 723 aa22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 PIGZQ86VD9 579 aa22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 CMTM8Q8IZV2 173 aa22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 PDZD8Q8NEN9 1154 aa22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 UBA3Q8TBC4 463 aa22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 PCMTD1Q96MG8 357 aaPredicted RBP22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 SMG9Q9H0W8 520 aaKnown RBP22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 TSPY26PQ9H489 355 aa22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 EPHX3Q9H6B9 360 aa22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 ACP6Q9NPH0 428 aa22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 GMIPQ9P107 970 aa22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 DUSP12Q9UNI6 340 aa22.37■■□□□ 1.17
TSPAN4-206ENST00000397408 FAM92AA1XBS5 289 aa22.36■■□□□ 1.17
TSPAN4-206ENST00000397408 C2orf78A6NCI8 922 aa22.36■■□□□ 1.17
TSPAN4-206ENST00000397408 TULP2O00295 520 aa22.36■■□□□ 1.17
TSPAN4-206ENST00000397408 NCANO14594 1321 aa22.36■■□□□ 1.17
TSPAN4-206ENST00000397408 XPO1O14980 1071 aaKnown RBP22.36■■□□□ 1.17
TSPAN4-206ENST00000397408 NARSO43776 548 aaKnown RBP22.36■■□□□ 1.17
TSPAN4-206ENST00000397408 ABL1P00519 1130 aa22.36■■□□□ 1.17
TSPAN4-206ENST00000397408 SETSIPP0DME0 302 aa22.36■■□□□ 1.17
TSPAN4-206ENST00000397408 GNA15P30679 374 aa22.36■■□□□ 1.17
TSPAN4-206ENST00000397408 DRAP1Q14919 205 aaPredicted RBP22.36■■□□□ 1.17
TSPAN4-206ENST00000397408 UBALD2Q8IYN6 164 aa22.36■■□□□ 1.17
TSPAN4-206ENST00000397408 OVCA2Q8WZ82 227 aa22.36■■□□□ 1.17
TSPAN4-206ENST00000397408 ERGIC2Q96RQ1 377 aa22.36■■□□□ 1.17
TSPAN4-206ENST00000397408 NAA15Q9BXJ9 866 aaKnown RBP22.36■■□□□ 1.17
TSPAN4-206ENST00000397408 PLA2G2FQ9BZM2 168 aa22.36■■□□□ 1.17
TSPAN4-206ENST00000397408 TRAV19A0A0A6YYK7 116 aa22.35■■□□□ 1.17
TSPAN4-206ENST00000397408 SOBPA7XYQ1 873 aa22.35■■□□□ 1.17
TSPAN4-206ENST00000397408 FOXN3O00409 490 aaPredicted RBP22.35■■□□□ 1.17
TSPAN4-206ENST00000397408 EPHB6O15197 1021 aa22.35■■□□□ 1.17
TSPAN4-206ENST00000397408 CYP26A1O43174 497 aa22.35■■□□□ 1.17
TSPAN4-206ENST00000397408 THAP12O43422 761 aa22.35■■□□□ 1.17
TSPAN4-206ENST00000397408 WEE1P30291 646 aa22.35■■□□□ 1.17
TSPAN4-206ENST00000397408 KIF11P52732 1056 aa22.35■■□□□ 1.17
TSPAN4-206ENST00000397408 GRM2Q14416 872 aa22.35■■□□□ 1.17
TSPAN4-206ENST00000397408 FILIP1LQ4L180 1135 aa22.35■■□□□ 1.17
TSPAN4-206ENST00000397408 PKDCCQ504Y2 493 aa22.35■■□□□ 1.17
TSPAN4-206ENST00000397408 EDAQ92838 391 aa22.35■■□□□ 1.17
TSPAN4-206ENST00000397408 RSPRY1Q96DX4 576 aa22.35■■□□□ 1.17
TSPAN4-206ENST00000397408 SLC22A12Q96S37 553 aa22.35■■□□□ 1.17
TSPAN4-206ENST00000397408 UBXN6Q9BZV1 441 aa22.35■■□□□ 1.17
TSPAN4-206ENST00000397408 HEPACAM2A8MVW5 462 aa22.34■■□□□ 1.17
TSPAN4-206ENST00000397408 DPYSL4O14531 572 aa22.34■■□□□ 1.17
TSPAN4-206ENST00000397408 MED7O43513 233 aa22.34■■□□□ 1.17
TSPAN4-206ENST00000397408 SERPINC1P01008 464 aa22.34■■□□□ 1.17
TSPAN4-206ENST00000397408 CKMP06732 381 aa22.34■■□□□ 1.17
TSPAN4-206ENST00000397408 SRFP11831 508 aa22.34■■□□□ 1.17
TSPAN4-206ENST00000397408 SMYD5Q6GMV2 418 aa22.34■■□□□ 1.17
TSPAN4-206ENST00000397408 VITQ6UXI7 678 aa22.34■■□□□ 1.17
TSPAN4-206ENST00000397408 FAM71AQ8IYT1 594 aa22.34■■□□□ 1.17
TSPAN4-206ENST00000397408 ARL14EPQ8N8R7 260 aaPredicted RBP22.34■■□□□ 1.17
TSPAN4-206ENST00000397408 NEK11Q8NG66 645 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms