RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 FAM83EQ2M2I3 478 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 BRSK2Q8IWQ3 736 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 RCOR2Q8IZ40 523 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 TSPAN14Q8NG11 270 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 KLHL28Q9NXS3 571 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 FAM187AA6NFU0 413 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 KHDRBS3O75525 346 aaKnown RBP12.74□□□□□ -0.37
SMU1-201ENST00000397149 YY1P25490 414 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 DNAJB2P25686 324 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 GOLGA7BQ2TAP0 167 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 MTFMTQ96DP5 389 aaKnown RBP12.74□□□□□ -0.37
SMU1-201ENST00000397149 AGPAT1Q99943 283 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 PRRG3Q9BZD7 231 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 MRPL42Q9Y6G3 142 aaKnown RBP12.74□□□□□ -0.37
SMU1-201ENST00000397149 TRIM64A6NGJ6 449 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 SH2B2O14492 632 aaPredicted RBP12.74□□□□□ -0.37
SMU1-201ENST00000397149 TEX33O43247 280 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 NMT2O60551 498 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 CYP21A2P08686 494 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 SKIV2L2P42285 1042 aaKnown RBP12.74□□□□□ -0.37
SMU1-201ENST00000397149 PTGER2P43116 358 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 NUP107P57740 925 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 IL2P60568 153 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 ISLR2Q6UXK2 745 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 ZNF473Q8WTR7 871 aaKnown RBP12.74□□□□□ -0.37
SMU1-201ENST00000397149 COL26A1Q96A83 441 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 KLK14Q9P0G3 267 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 AP4S1Q9Y587 144 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 PSMD14O00487 310 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 EXTL3O43909 919 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 TSPAN19P0C672 248 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 ADD2P35612 726 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 ALDH7A1P49419 539 aaKnown RBP12.74□□□□□ -0.37
SMU1-201ENST00000397149 MYBPC1Q00872 1141 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 DKK3Q9UBP4 350 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 USP15Q9Y4E8 981 aaPredicted RBP12.74□□□□□ -0.37
SMU1-201ENST00000397149 WDR19Q8NEZ3 1342 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 PITPNM2Q9BZ72 1349 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 BAIAP3O94812 1187 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 P4HBP07237 508 aaKnown RBP12.74□□□□□ -0.37
SMU1-201ENST00000397149 FAM71DQ8N9W8 422 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 RPRD1AQ96P16 312 aaPredicted RBP12.74□□□□□ -0.37
SMU1-201ENST00000397149 SLITRK1Q96PX8 696 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 CCDC189A1A4V9 331 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 hCG_1984214I3L0E3 225 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 MYL12AP19105 171 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 PPP2R1BP30154 601 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 TRIM72Q6ZMU5 477 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 ZNF713Q8N859 430 aaPredicted RBP12.74□□□□□ -0.37
SMU1-201ENST00000397149 ZBTB10Q96DT7 871 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 MANSC1Q9H8J5 431 aa12.74□□□□□ -0.37
SMU1-201ENST00000397149 CHORDC1Q9UHD1 332 aaPredicted RBP12.74□□□□□ -0.37
SMU1-201ENST00000397149 KIF14Q15058 1648 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 TRIM49D1C9J1S8 452 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 PTGES3LE9PB15 166 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 IFRD1O00458 451 aaPredicted RBP12.73□□□□□ -0.37
SMU1-201ENST00000397149 ERCC2P18074 760 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 EIF2S3LQ2VIR3 472 aaKnown RBP12.73□□□□□ -0.37
SMU1-201ENST00000397149 BRINP3Q76B58 766 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 E2F7Q96AV8 911 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 QKIQ96PU8 341 aaKnown RBP eCLIP12.73□□□□□ -0.37
SMU1-201ENST00000397149 UTYO14607 1347 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.73□□□□□ -0.37
SMU1-201ENST00000397149 PP2D1A8MPX8 630 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 A8MX80 341 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 BTN3A3O00478 584 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 HMGB3O15347 200 aaKnown RBP12.73□□□□□ -0.37
SMU1-201ENST00000397149 ATMINO43313 823 aaPredicted RBP12.73□□□□□ -0.37
SMU1-201ENST00000397149 ZNF157P51786 506 aaPredicted RBP12.73□□□□□ -0.37
SMU1-201ENST00000397149 SMU1Q2TAY7 513 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 GLB1LQ6UWU2 654 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 MSANTD1Q6ZTZ1 278 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 IKBIPQ70UQ0 350 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 UCMAQ8WVF2 138 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 ZBTB5O15062 677 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 ZCWPW2Q504Y3 356 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 DENND5BQ6ZUT9 1274 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 MYO1HQ8N1T3 1032 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 SMYD1Q8NB12 490 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 HIC2Q96JB3 615 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 BBS4Q96RK4 519 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 EIF2AK1Q9BQI3 630 aaKnown RBP12.73□□□□□ -0.37
SMU1-201ENST00000397149 METTL5Q9NRN9 209 aaKnown RBP12.73□□□□□ -0.37
SMU1-201ENST00000397149 CDY2AQ9Y6F7 541 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 CDY1Q9Y6F8 540 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 SH3D21A4FU49 640 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 ERI2A8K979 691 aaKnown RBP12.73□□□□□ -0.37
SMU1-201ENST00000397149 SSNA1O43805 119 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 NMT1P30419 496 aaKnown RBP12.73□□□□□ -0.37
SMU1-201ENST00000397149 SERPINB9P50453 376 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 RABL6Q3YEC7 729 aaPredicted RBP12.73□□□□□ -0.37
SMU1-201ENST00000397149 IGFLR1Q9H665 355 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 COPG2Q9UBF2 871 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 GPC6Q9Y625 555 aaPredicted RBP12.73□□□□□ -0.37
SMU1-201ENST00000397149 ERVV-2B6SEH9 535 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 RGS20O76081 388 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 HIST1H2ABP04908 130 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 CKMP06732 381 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 PRR29P0C7W0 189 aa12.73□□□□□ -0.37
SMU1-201ENST00000397149 WARSP23381 471 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms