RNA–Protein interactions for RNA: ENST00000396668.7

TMEM106B-202, Transcript of transmembrane protein 106B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106B, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106B-202ENST00000396668 C15orf59Q2T9L4 293 aaPredicted RBP13.35□□□□□ -0.27
TMEM106B-202ENST00000396668 CCDC14Q49A88 953 aa13.35□□□□□ -0.27
TMEM106B-202ENST00000396668 VARS2Q5ST30 1063 aaKnown RBP13.35□□□□□ -0.27
TMEM106B-202ENST00000396668 FAM171A1Q5VUB5 890 aa13.35□□□□□ -0.27
TMEM106B-202ENST00000396668 FAM117BQ6P1L5 589 aa13.35□□□□□ -0.27
TMEM106B-202ENST00000396668 RSPO2Q6UXX9 243 aaPredicted RBP13.35□□□□□ -0.27
TMEM106B-202ENST00000396668 LRRC43Q8N309 656 aa13.35□□□□□ -0.27
TMEM106B-202ENST00000396668 MMGT1Q8N4V1 131 aa13.35□□□□□ -0.27
TMEM106B-202ENST00000396668 HDAC7Q8WUI4 952 aa13.35□□□□□ -0.27
TMEM106B-202ENST00000396668 RXFP2Q8WXD0 754 aa13.35□□□□□ -0.27
TMEM106B-202ENST00000396668 KCTD13Q8WZ19 329 aa13.35□□□□□ -0.27
TMEM106B-202ENST00000396668 CFAP57Q96MR6 1250 aa13.35□□□□□ -0.27
TMEM106B-202ENST00000396668 PNKPQ96T60 521 aa13.35□□□□□ -0.27
TMEM106B-202ENST00000396668 RHOXF2Q9BQY4 288 aa13.35□□□□□ -0.27
TMEM106B-202ENST00000396668 VN1R3Q9BXE9 311 aa13.35□□□□□ -0.27
TMEM106B-202ENST00000396668 MRPL9Q9BYD2 267 aaKnown RBP13.35□□□□□ -0.27
TMEM106B-202ENST00000396668 FGFR3P22607 806 aa13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 ZNF143P52747 638 aaPredicted RBP13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 RAB41Q5JT25 222 aa13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 RTP2Q5QGT7 225 aa13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 FUT10Q6P4F1 479 aa13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 CYP4V2Q6ZWL3 525 aaPredicted RBP13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 ADAT2Q7Z6V5 191 aaKnown RBP13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 RHOT1Q8IXI2 618 aa13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 ACSF2Q96CM8 615 aaPredicted RBP13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 RPGRIP1Q96KN7 1286 aa13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 LRRC1Q9BTT6 524 aa13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 CYLDQ9NQC7 956 aa13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 KLHL11Q9NVR0 708 aa13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 CALCOCO1Q9P1Z2 691 aa13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 NLRC5Q86WI3 1866 aa13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 PDGFRAP16234 1089 aa13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 EPHB4P54760 987 aa13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 SIX1Q15475 284 aaPredicted RBP13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 SLC26A9Q7LBE3 791 aa13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 OTOP2Q7RTS6 562 aa13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 CEP57Q86XR8 500 aa13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 THEM5Q8N1Q8 247 aa13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 HINFPQ9BQA5 517 aa13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 TMEM175Q9BSA9 504 aa13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 C11orf84Q9BUA3 381 aaPredicted RBP13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 ZCWPW1Q9H0M4 648 aa13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 TMEM51Q9NW97 253 aa13.34□□□□□ -0.27
TMEM106B-202ENST00000396668 ALPK3Q96L96 1907 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 SYN3O14994 580 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 PSTPIP1O43586 416 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 TRAPPC3O43617 180 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 TBC1D4O60343 1298 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 GJC1P36383 396 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 ACADSBP45954 432 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 ADCY2Q08462 1091 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 SLC39A12Q504Y0 691 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 HFE2Q6ZVN8 426 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 BHLHA9Q7RTU4 235 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 ZDHHC17Q8IUH5 632 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 TMEM199Q8N511 208 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 SMARCD1Q96GM5 515 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 PEBP4Q96S96 227 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 COLEC11Q9BWP8 271 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 PARD6BQ9BYG5 372 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 DNAI2Q9GZS0 605 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 LAMA3Q16787 3333 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 GPD1P21695 349 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 CYP2F1P24903 491 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 SSR1P43307 286 aaKnown RBP13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 TKTL1P51854 596 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 MRPS5P82675 430 aaKnown RBP13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 LONRF2Q1L5Z9 754 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 KCNT1Q5JUK3 1230 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 KATNAL2Q8IYT4 538 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 RNF168Q8IYW5 571 aaPredicted RBP13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 GPR161Q8N6U8 529 aaKnown RBP13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 RAPGEF5Q92565 580 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 FAM53CQ9NYF3 392 aa13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 DMGDHQ9UI17 866 aaKnown RBP13.33□□□□□ -0.28
TMEM106B-202ENST00000396668 C3orf70A6NLC5 250 aaPredicted RBP13.32□□□□□ -0.28
TMEM106B-202ENST00000396668 PI4K2BG5E9Z4 385 aa13.32□□□□□ -0.28
TMEM106B-202ENST00000396668 KRIT1O00522 736 aa13.32□□□□□ -0.28
TMEM106B-202ENST00000396668 VNN2O95498 520 aa13.32□□□□□ -0.28
TMEM106B-202ENST00000396668 FYNP06241 537 aa13.32□□□□□ -0.28
TMEM106B-202ENST00000396668 MIPP30301 263 aa13.32□□□□□ -0.28
TMEM106B-202ENST00000396668 ATXN1P54253 815 aaKnown RBP13.32□□□□□ -0.28
TMEM106B-202ENST00000396668 PITX1P78337 314 aaPredicted RBP13.32□□□□□ -0.28
TMEM106B-202ENST00000396668 ATP11AP98196 1134 aa13.32□□□□□ -0.28
TMEM106B-202ENST00000396668 TERF2Q15554 542 aa13.32□□□□□ -0.28
TMEM106B-202ENST00000396668 CDO1Q16878 200 aa13.32□□□□□ -0.28
TMEM106B-202ENST00000396668 SMTNL2Q2TAL5 461 aa13.32□□□□□ -0.28
TMEM106B-202ENST00000396668 LRRC38Q5VT99 294 aa13.32□□□□□ -0.28
TMEM106B-202ENST00000396668 SLC13A5Q86YT5 568 aaPredicted RBP13.32□□□□□ -0.28
TMEM106B-202ENST00000396668 TTC9BQ8N6N2 239 aa13.32□□□□□ -0.28
TMEM106B-202ENST00000396668 BADQ92934 168 aa13.32□□□□□ -0.28
TMEM106B-202ENST00000396668 KRT12Q99456 494 aa13.32□□□□□ -0.28
TMEM106B-202ENST00000396668 CNPY3Q9BT09 278 aa13.32□□□□□ -0.28
TMEM106B-202ENST00000396668 ULBP1Q9BZM6 244 aa13.32□□□□□ -0.28
TMEM106B-202ENST00000396668 PLEKHA4Q9H4M7 779 aa13.32□□□□□ -0.28
TMEM106B-202ENST00000396668 IL23AQ9NPF7 189 aa13.32□□□□□ -0.28
TMEM106B-202ENST00000396668 PCSK1NQ9UHG2 260 aa13.32□□□□□ -0.28
TMEM106B-202ENST00000396668 SF3B1O75533 1304 aaKnown RBP eCLIP13.32□□□□□ -0.283e-6■■■■■ 137.9
TMEM106B-202ENST00000396668 PTPRSQ13332 1948 aa13.32□□□□□ -0.28
TMEM106B-202ENST00000396668 ARHGEF37A1IGU5 675 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms