RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.9■□□□□ 0.3
SNX6-202ENST00000396526 DPYSL4O14531 572 aa16.89■□□□□ 0.3
SNX6-202ENST00000396526 SCNN1AP37088 669 aa16.89■□□□□ 0.3
SNX6-202ENST00000396526 MAGEA4P43358 317 aa16.89■□□□□ 0.3
SNX6-202ENST00000396526 SLCO1A2P46721 670 aa16.89■□□□□ 0.3
SNX6-202ENST00000396526 TTC30AQ86WT1 665 aa16.89■□□□□ 0.3
SNX6-202ENST00000396526 SPATS2Q86XZ4 545 aaKnown RBP16.89■□□□□ 0.3
SNX6-202ENST00000396526 RELL1Q8IUW5 271 aa16.89■□□□□ 0.3
SNX6-202ENST00000396526 PPANQ9NQ55 473 aaKnown RBP16.89■□□□□ 0.3
SNX6-202ENST00000396526 DNAJC17Q9NVM6 304 aaKnown RBP16.89■□□□□ 0.3
SNX6-202ENST00000396526 CDY2AQ9Y6F7 541 aa16.89■□□□□ 0.3
SNX6-202ENST00000396526 E7EVH7 732 aa16.89■□□□□ 0.29
SNX6-202ENST00000396526 CHKAP35790 457 aa16.89■□□□□ 0.29
SNX6-202ENST00000396526 PTGISQ16647 500 aa16.89■□□□□ 0.29
SNX6-202ENST00000396526 EFHC1Q5JVL4 640 aa16.89■□□□□ 0.29
SNX6-202ENST00000396526 UBXN11Q5T124 520 aa16.89■□□□□ 0.29
SNX6-202ENST00000396526 MFSD5Q6N075 450 aa16.89■□□□□ 0.29
SNX6-202ENST00000396526 SCUBE3Q8IX30 993 aa16.89■□□□□ 0.29
SNX6-202ENST00000396526 ARFGAP1Q8N6T3 406 aa16.89■□□□□ 0.29
SNX6-202ENST00000396526 TEKT4Q8WW24 435 aa16.89■□□□□ 0.29
SNX6-202ENST00000396526 GPR182O15218 404 aa16.89■□□□□ 0.29
SNX6-202ENST00000396526 RBP3P10745 1247 aa16.89■□□□□ 0.29
SNX6-202ENST00000396526 TAZQ16635 292 aa16.89■□□□□ 0.29
SNX6-202ENST00000396526 SPATA18Q8TC71 538 aa16.89■□□□□ 0.29
SNX6-202ENST00000396526 FAM172AQ8WUF8 416 aa16.89■□□□□ 0.29
SNX6-202ENST00000396526 RNF39Q9H2S5 420 aa16.89■□□□□ 0.29
SNX6-202ENST00000396526 SAYSD1Q9NPB0 183 aa16.89■□□□□ 0.29
SNX6-202ENST00000396526 GTF2IRD1Q9UHL9 959 aa16.89■□□□□ 0.29
SNX6-202ENST00000396526 CCT5P48643 541 aa16.88■□□□□ 0.29
SNX6-202ENST00000396526 NBPF20Q3BBV1 942 aa16.88■□□□□ 0.29
SNX6-202ENST00000396526 PKDCCQ504Y2 493 aa16.88■□□□□ 0.29
SNX6-202ENST00000396526 DARS2Q6PI48 645 aaKnown RBP16.88■□□□□ 0.29
SNX6-202ENST00000396526 CXCL17Q6UXB2 119 aa16.88■□□□□ 0.29
SNX6-202ENST00000396526 AAASQ9NRG9 546 aa16.88■□□□□ 0.29
SNX6-202ENST00000396526 A0A087WUV0 522 aaPredicted RBP16.88■□□□□ 0.29
SNX6-202ENST00000396526 PFKMP08237 780 aa16.88■□□□□ 0.29
SNX6-202ENST00000396526 LILRA4P59901 499 aa16.88■□□□□ 0.29
SNX6-202ENST00000396526 HIC1Q14526 733 aa16.88■□□□□ 0.29
SNX6-202ENST00000396526 FAM228AQ86W67 206 aa16.88■□□□□ 0.29
SNX6-202ENST00000396526 GMNCA6NCL1 334 aa16.88■□□□□ 0.29
SNX6-202ENST00000396526 C3orf70A6NLC5 250 aaPredicted RBP16.88■□□□□ 0.29
SNX6-202ENST00000396526 MYCNP04198 464 aaPredicted RBP16.88■□□□□ 0.29
SNX6-202ENST00000396526 LRPAP1P30533 357 aa16.88■□□□□ 0.29
SNX6-202ENST00000396526 HOXC8P31273 242 aa16.88■□□□□ 0.29
SNX6-202ENST00000396526 C15orf59Q2T9L4 293 aaPredicted RBP16.88■□□□□ 0.29
SNX6-202ENST00000396526 OLFML1Q6UWY5 402 aa16.88■□□□□ 0.29
SNX6-202ENST00000396526 EPS8L3Q8TE67 593 aaKnown RBP16.88■□□□□ 0.29
SNX6-202ENST00000396526 DDX23Q9BUQ8 820 aaKnown RBP16.88■□□□□ 0.29
SNX6-202ENST00000396526 NINJ2Q9NZG7 142 aa16.88■□□□□ 0.29
SNX6-202ENST00000396526 SLC12A6Q9UHW9 1150 aa16.88■□□□□ 0.29
SNX6-202ENST00000396526 GRIN2DO15399 1336 aa16.87■□□□□ 0.29
SNX6-202ENST00000396526 H7C0C1 242 aa16.87■□□□□ 0.29
SNX6-202ENST00000396526 CYB561D2O14569 222 aa16.87■□□□□ 0.29
SNX6-202ENST00000396526 CDH16O75309 829 aa16.87■□□□□ 0.29
SNX6-202ENST00000396526 ATP5OP48047 213 aa16.87■□□□□ 0.29
SNX6-202ENST00000396526 ROR1Q01973 937 aa16.87■□□□□ 0.29
SNX6-202ENST00000396526 SLC26A9Q7LBE3 791 aa16.87■□□□□ 0.29
SNX6-202ENST00000396526 PPIL6Q8IXY8 311 aa16.87■□□□□ 0.29
SNX6-202ENST00000396526 LRRC4Q9HBW1 653 aa16.87■□□□□ 0.29
SNX6-202ENST00000396526 ST3GAL5Q9UNP4 418 aa16.87■□□□□ 0.29
SNX6-202ENST00000396526 CFAP69A5D8W1 941 aa16.87■□□□□ 0.29
SNX6-202ENST00000396526 SEPT4O43236 478 aa16.87■□□□□ 0.29
SNX6-202ENST00000396526 THP07101 528 aa16.87■□□□□ 0.29
SNX6-202ENST00000396526 ZFXP17010 805 aaPredicted RBP16.87■□□□□ 0.29
SNX6-202ENST00000396526 WARSP23381 471 aaKnown RBP16.87■□□□□ 0.29
SNX6-202ENST00000396526 ARL4CP56559 192 aa16.87■□□□□ 0.29
SNX6-202ENST00000396526 BCAR1P56945 870 aa16.87■□□□□ 0.29
SNX6-202ENST00000396526 CCDC14Q49A88 953 aa16.87■□□□□ 0.29
SNX6-202ENST00000396526 CYP4F22Q6NT55 531 aa16.87■□□□□ 0.29
SNX6-202ENST00000396526 VSIG1Q86XK7 387 aa16.87■□□□□ 0.29
SNX6-202ENST00000396526 RIBC1Q8N443 379 aaPredicted RBP16.87■□□□□ 0.29
SNX6-202ENST00000396526 SMG8Q8ND04 991 aaKnown RBP16.87■□□□□ 0.29
SNX6-202ENST00000396526 CENPTQ96BT3 561 aa16.87■□□□□ 0.29
SNX6-202ENST00000396526 CXCL16Q9H2A7 254 aa16.87■□□□□ 0.29
SNX6-202ENST00000396526 PPCSQ9HAB8 311 aa16.87■□□□□ 0.29
SNX6-202ENST00000396526 FAM105AQ9NUU6 356 aa16.87■□□□□ 0.29
SNX6-202ENST00000396526 RNF19AQ9NV58 838 aa16.87■□□□□ 0.29
SNX6-202ENST00000396526 PAPSS1O43252 624 aaPredicted RBP16.86■□□□□ 0.29
SNX6-202ENST00000396526 ABHD2P08910 425 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 ZSCAN5DPP0CG00 497 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 LCP1P13796 627 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 ATP2A2P16615 1042 aaKnown RBP16.86■□□□□ 0.29
SNX6-202ENST00000396526 PTPN9P43378 593 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 TM4SF4P48230 202 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 AUHQ13825 339 aaKnown RBP16.86■□□□□ 0.29
SNX6-202ENST00000396526 LONRF1Q17RB8 773 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 PPP1R21Q6ZMI0 780 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 ARCQ7LC44 396 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 NLRP14Q86W24 1093 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 SLC2A14Q8TDB8 520 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 C9orf72Q96LT7 481 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 MED10Q9BTT4 135 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 TSPYL2Q9H2G4 693 aaPredicted RBP16.86■□□□□ 0.29
SNX6-202ENST00000396526 RABEP2Q9H5N1 569 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 INTS9Q9NV88 658 aaKnown RBP16.86■□□□□ 0.29
SNX6-202ENST00000396526 NOD1Q9Y239 953 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 TLL2Q9Y6L7 1015 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 APOL1O14791 398 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 TCEA3O75764 348 aa16.86■□□□□ 0.29
SNX6-202ENST00000396526 PGK1P00558 417 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms