RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 ATXN3P54252 364 aaPredicted RBP9.72□□□□□ -0.85
NDE1-201ENST00000396354 FYB2Q5VWT5 728 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 EEF1DP3Q658K8 133 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 DSTYKQ6XUX3 929 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 IGDCC3Q8IVU1 814 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 FAM13CQ8NE31 585 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 SPATA18Q8TC71 538 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 ZNF75CPQ92670 426 aaPredicted RBP9.72□□□□□ -0.85
NDE1-201ENST00000396354 RILPQ96NA2 401 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 DDX50Q9BQ39 737 aaKnown RBP9.72□□□□□ -0.85
NDE1-201ENST00000396354 UGT1A7Q9HAW7 530 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 UGT1A10Q9HAW8 530 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 UGT1A8Q9HAW9 530 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 CSADQ9Y600 493 aa9.72□□□□□ -0.85
NDE1-201ENST00000396354 FAM237BA0A1B0GVD1 139 aa9.71□□□□□ -0.85
NDE1-201ENST00000396354 CFAP73A6NFT4 308 aa9.71□□□□□ -0.85
NDE1-201ENST00000396354 MEI4A8MW99 385 aa9.71□□□□□ -0.85
NDE1-201ENST00000396354 DNALI1O14645 258 aaPredicted RBP9.71□□□□□ -0.85
NDE1-201ENST00000396354 ADCY3O60266 1144 aa9.71□□□□□ -0.85
NDE1-201ENST00000396354 MAFO75444 373 aaPredicted RBP9.71□□□□□ -0.85
NDE1-201ENST00000396354 TMEM63AO94886 807 aa9.71□□□□□ -0.85
NDE1-201ENST00000396354 MLLT3P42568 568 aaPredicted RBP9.71□□□□□ -0.85
NDE1-201ENST00000396354 CENPCQ03188 943 aa9.71□□□□□ -0.85
NDE1-201ENST00000396354 PTP4A2Q12974 167 aa9.71□□□□□ -0.85
NDE1-201ENST00000396354 KLF1Q13351 362 aaPredicted RBP9.71□□□□□ -0.85
NDE1-201ENST00000396354 TTLL12Q14166 644 aaPredicted RBP9.71□□□□□ -0.85
NDE1-201ENST00000396354 FAM102AQ5T9C2 384 aaPredicted RBP9.71□□□□□ -0.85
NDE1-201ENST00000396354 WLSQ5T9L3 541 aa9.71□□□□□ -0.85
NDE1-201ENST00000396354 ALYREFQ86V81 257 aaKnown RBP9.71□□□□□ -0.85
NDE1-201ENST00000396354 PIWIL1Q96J94 861 aaKnown RBP9.71□□□□□ -0.85
NDE1-201ENST00000396354 RAB6BQ9NRW1 208 aa9.71□□□□□ -0.85
NDE1-201ENST00000396354 DNAJC25-GNG10A0A024R161 153 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 LPXNO60711 386 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 INHBAP08476 426 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 CXCL8P10145 99 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 ELK3P41970 407 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 ABCG1P45844 678 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 CLCN3P51790 818 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 CDH6P55285 790 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 GPX6P59796 221 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 EIF3EP60228 445 aaKnown RBP9.71□□□□□ -0.86
NDE1-201ENST00000396354 TMEM62Q0P6H9 643 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 LAMTOR4Q0VGL1 99 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 KBTBD12Q3ZCT8 623 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 PPP1R15BQ5SWA1 713 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 MROH9Q5TGP6 573 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 CROCCP2Q86T23 111 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 PIP4P2Q8N4L2 257 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 ZCCHC9Q8N567 271 aaKnown RBP9.71□□□□□ -0.86
NDE1-201ENST00000396354 UBR7Q8N806 425 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 C7orf31Q8N865 590 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 OPTNQ96CV9 577 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 LPIN3Q9BQK8 851 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 TMEM106CQ9BVX2 250 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 ZCWPW1Q9H0M4 648 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 CXCL16Q9H2A7 254 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 DENND2DQ9H6A0 471 aaPredicted RBP9.71□□□□□ -0.86
NDE1-201ENST00000396354 SMYD3Q9H7B4 428 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.71□□□□□ -0.86
NDE1-201ENST00000396354 FAM49BQ9NUQ9 324 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 IP6K2Q9UHH9 426 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.71□□□□□ -0.86
NDE1-201ENST00000396354 H3BRJ5 948 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 M0QYV0 167 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 GYG2O15488 501 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 KRT36O76013 467 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 CYP1A1P04798 512 aaPredicted RBP9.71□□□□□ -0.86
NDE1-201ENST00000396354 CCNHP51946 323 aaPredicted RBP9.71□□□□□ -0.86
NDE1-201ENST00000396354 ALDH18A1P54886 795 aaKnown RBP9.71□□□□□ -0.86
NDE1-201ENST00000396354 BPIFB4P59827 614 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 FAAP100Q0VG06 881 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 RCN1Q15293 331 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 CCDC62Q6P9F0 684 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 METTL7BQ6UX53 244 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 KIAA0319LQ8IZA0 1049 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 UNC5BQ8IZJ1 945 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 C12orf29Q8N999 325 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 ARMC2Q8NEN0 867 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 PPP1R14CQ8TAE6 165 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 MAIP1Q8WWC4 291 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 HEXIM2Q96MH2 286 aaKnown RBP9.71□□□□□ -0.86
NDE1-201ENST00000396354 TTC1Q99614 292 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 RNPEPQ9H4A4 650 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 TXLNGQ9NUQ3 528 aa9.71□□□□□ -0.86
NDE1-201ENST00000396354 PPARGC1AQ9UBK2 798 aaKnown RBP9.71□□□□□ -0.86
NDE1-201ENST00000396354 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.71□□□□□ -0.86
NDE1-201ENST00000396354 SPDYE5A6NIY4 337 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 KBTBD13C9JR72 458 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 ASMTLO95671 621 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 KLRC2P26717 231 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 RPL22P35268 128 aaKnown RBP9.7□□□□□ -0.86
NDE1-201ENST00000396354 SLC1A1P43005 524 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 MKRN3Q13064 507 aaKnown RBP9.7□□□□□ -0.86
NDE1-201ENST00000396354 NR1H3Q13133 447 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 PTK7Q13308 1070 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 PEX6Q13608 980 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 KPNB1Q14974 876 aaKnown RBP9.7□□□□□ -0.86
NDE1-201ENST00000396354 ZNF568Q3ZCX4 644 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 PTPN20Q4JDL3 420 aa9.7□□□□□ -0.86
NDE1-201ENST00000396354 TFDP3Q5H9I0 405 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms