RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 PTPN1P18031 435 aaKnown RBP6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 SOX9P48436 509 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 VASPP50552 380 aaPredicted RBP6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 ZNF445P59923 1031 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 MAP7D1Q3KQU3 841 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 USP39Q53GS9 565 aaKnown RBP6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 TDRD10Q5VZ19 366 aaKnown RBP6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 CPXM2Q8N436 756 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 STKLD1Q8NE28 680 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 SH3RF2Q8TEC5 729 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 CNTNAP3BQ96NU0 1288 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 CNTNAP3Q9BZ76 1288 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 ZDHHC5Q9C0B5 715 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 DNAI2Q9GZS0 605 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 FBXO44Q9H4M3 255 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 TPX2Q9ULW0 747 aaKnown RBP6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 ZNF292O60281 2723 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 PDXKO00764 312 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 CYP2F1P24903 491 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 SNRNP35Q16560 246 aaKnown RBP6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 PKN3Q6P5Z2 889 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 DBX2Q6ZNG2 339 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 KIAA0907Q7Z7F0 614 aaPredicted RBP6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 ELOA2Q8IYF1 753 aaPredicted RBP6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 CACTIN-AS1Q8N1I8 211 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 MAB21L3Q8N8X9 362 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 WHAMMQ8TF30 809 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 SMARCD1Q96GM5 515 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 PCED1BQ96HM7 432 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 TNIP3Q96KP6 325 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 KLF16Q9BXK1 252 aaPredicted RBP6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 B3GNT5Q9BYG0 378 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 SLC2A11Q9BYW1 496 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 MTMR12Q9C0I1 747 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 TISP43B9A030 160 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 KLRC4O43908 158 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 CRY1Q16526 586 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 N4BP2L1Q5TBK1 243 aaPredicted RBP6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 TXNDC8Q6A555 127 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 USP49Q70CQ1 688 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 CEP68Q76N32 757 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 GIPC2Q8TF65 315 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 SCFD1Q8WVM8 642 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 HINFPQ9BQA5 517 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 KCTD10Q9H3F6 313 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 SLITRK6Q9H5Y7 841 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 CAPN10Q9HC96 672 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 POLMQ9NP87 494 aaPredicted RBP6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 RBM12Q9NTZ6 932 aaKnown RBP6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 C2orf42Q9NWW7 574 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 CLIC5Q9NZA1 410 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 PILRBQ9UKJ0 227 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 HPSEQ9Y251 543 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 USP3Q9Y6I4 520 aa6.63□□□□□ -1.35
SMARCAD1-203ENST00000394961 HHLA1C9JL84 531 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 DTNBO60941 627 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 APODP05090 189 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 TNK2Q07912 1038 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 KCNA1Q09470 495 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 RAD51AP2Q09MP3 1159 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 SEMA3BQ13214 749 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 DHCR24Q15392 516 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 MEA1Q16626 185 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 KNOP1Q1ED39 458 aaKnown RBP6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 FAM26FQ5R3K3 315 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 NUDT18Q6ZVK8 323 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 PAQR9Q6ZVX9 377 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 CCDC186Q7Z3E2 898 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 B3GALNT2Q8NCR0 500 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 OR5B17Q8NGF7 314 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 ZNF516Q92618 1163 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 GATA6Q92908 595 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 SPACA7Q96KW9 195 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 SLITRK1Q96PX8 696 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 USP28Q96RU2 1077 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 HNRNPABQ99729 332 aaKnown RBP6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 EBF3Q9H4W6 596 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 PDE11AQ9HCR9 933 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 DMAP1Q9NPF5 467 aaPredicted RBP6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 KIAA1522Q9P206 1035 aaPredicted RBP6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 WDR35Q9P2L0 1181 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 SPTLC2O15270 562 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 STX6O43752 255 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 ZNF217O75362 1048 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 GJB3O75712 270 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 SOAT2O75908 522 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 P4HA1P13674 534 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 GPR15P49685 360 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 ZXDBP98169 803 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 TFAMQ00059 246 aaKnown RBP6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 TAF12Q16514 161 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 ZACNQ401N2 412 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 AASDHQ4L235 1098 aaPredicted RBP6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 DAB2IPQ5VWQ8 1189 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 TADA2BQ86TJ2 420 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 TMEM130Q8N3G9 435 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 C12orf50Q8NA57 414 aaPredicted RBP6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 RPLP0P6Q8NHW5 317 aa6.62□□□□□ -1.35
SMARCAD1-203ENST00000394961 FGFBP2Q9BYJ0 223 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms