RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 E2F7Q96AV8 911 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 XPNPEP1Q9NQW7 623 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 FNDC3AQ9Y2H6 1198 aaKnown RBP13.78□□□□□ -0.2
NFKB1-202ENST00000394820 E9PBE3 544 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 KLHL41O60662 606 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 TOP3BO95985 862 aaKnown RBP13.78□□□□□ -0.2
NFKB1-202ENST00000394820 MX2P20592 715 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 DRG2P55039 364 aaKnown RBP13.78□□□□□ -0.2
NFKB1-202ENST00000394820 PRAMEP78395 509 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 SP2Q02086 613 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 LAMB3Q13751 1172 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 HIC1Q14526 733 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 LY6KQ17RY6 165 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 RNF135Q8IUD6 432 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 SLC9A9Q8IVB4 645 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 TMEM130Q8N3G9 435 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 ASAP3Q8TDY4 903 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 SGF29Q96ES7 293 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 LRRC19Q9H756 370 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 AAASQ9NRG9 546 aa13.78□□□□□ -0.2
NFKB1-202ENST00000394820 DNALI1O14645 258 aaPredicted RBP13.77□□□□□ -0.2
NFKB1-202ENST00000394820 FSCN2O14926 492 aa13.77□□□□□ -0.2
NFKB1-202ENST00000394820 XPO1O14980 1071 aaKnown RBP13.77□□□□□ -0.2
NFKB1-202ENST00000394820 AMPD1P23109 780 aa13.77□□□□□ -0.2
NFKB1-202ENST00000394820 WNT7BP56706 349 aa13.77□□□□□ -0.2
NFKB1-202ENST00000394820 ROR1Q01973 937 aa13.77□□□□□ -0.2
NFKB1-202ENST00000394820 STX3Q13277 289 aa13.77□□□□□ -0.2
NFKB1-202ENST00000394820 MED21Q13503 144 aa13.77□□□□□ -0.2
NFKB1-202ENST00000394820 CUL2Q13617 745 aa13.77□□□□□ -0.2
NFKB1-202ENST00000394820 ACAP1Q15027 740 aa13.77□□□□□ -0.2
NFKB1-202ENST00000394820 FKBP1CQ5VVH2 108 aa13.77□□□□□ -0.2
NFKB1-202ENST00000394820 SCARA3Q6AZY7 606 aa13.77□□□□□ -0.2
NFKB1-202ENST00000394820 PTAR1Q7Z6K3 402 aaPredicted RBP13.77□□□□□ -0.2
NFKB1-202ENST00000394820 CLNKQ7Z7G1 428 aa13.77□□□□□ -0.2
NFKB1-202ENST00000394820 MAP4K3Q8IVH8 894 aa13.77□□□□□ -0.2
NFKB1-202ENST00000394820 RCOR2Q8IZ40 523 aa13.77□□□□□ -0.2
NFKB1-202ENST00000394820 CEP120Q8N960 986 aa13.77□□□□□ -0.2
NFKB1-202ENST00000394820 RNF149Q8NC42 400 aa13.77□□□□□ -0.2
NFKB1-202ENST00000394820 OR5B17Q8NGF7 314 aa13.77□□□□□ -0.2
NFKB1-202ENST00000394820 MORC4Q8TE76 937 aa13.77□□□□□ -0.2
NFKB1-202ENST00000394820 MMP19Q99542 508 aa13.77□□□□□ -0.2
NFKB1-202ENST00000394820 APOL2Q9BQE5 337 aa13.77□□□□□ -0.2
NFKB1-202ENST00000394820 BTBD10Q9BSF8 475 aa13.77□□□□□ -0.2
NFKB1-202ENST00000394820 GOLGA8TH3BQL2 631 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 ATP9BO43861 1147 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 EDF1O60869 148 aaKnown RBP13.77□□□□□ -0.21
NFKB1-202ENST00000394820 HSPA4LO95757 839 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 TPBGLP0DKB5 382 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 PDGFRAP16234 1089 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 GLRA2P23416 452 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 SLC1A1P43005 524 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 PHKA2P46019 1235 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 LPCAT4Q643R3 524 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 DENND5BQ6ZUT9 1274 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 WDR60Q8WVS4 1066 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 SHC3Q92529 594 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 CNBD2Q96M20 576 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 ELP3Q9H9T3 547 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 FAF1Q9UNN5 650 aaPredicted RBP13.77□□□□□ -0.21
NFKB1-202ENST00000394820 ARFGEF1Q9Y6D6 1849 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 ZNF831Q5JPB2 1677 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 DKC1O60832 514 aaKnown RBP eCLIP13.77□□□□□ -0.21
NFKB1-202ENST00000394820 LYPLA1O75608 230 aaPredicted RBP13.77□□□□□ -0.21
NFKB1-202ENST00000394820 CD48P09326 243 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 TYK2P29597 1187 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 RFC1P35251 1148 aaPredicted RBP13.77□□□□□ -0.21
NFKB1-202ENST00000394820 PTK6Q13882 451 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 ANO7Q6IWH7 933 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 SCUBE1Q8IWY4 988 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 GSTCDQ8NEC7 633 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 HELQQ8TDG4 1101 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 ZNF483Q8TF39 744 aaPredicted RBP13.77□□□□□ -0.21
NFKB1-202ENST00000394820 USP13Q92995 863 aaPredicted RBP13.77□□□□□ -0.21
NFKB1-202ENST00000394820 CLMNQ96JQ2 1002 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 GCNAQ96QF7 691 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 ARHGEF3Q9NR81 526 aa13.77□□□□□ -0.21
NFKB1-202ENST00000394820 CREB3O43889 395 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 MUTP22033 750 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 RFX1P22670 979 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 TNFSF9P41273 254 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 USP4Q13107 963 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 TAF5Q15542 800 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 XKR3Q5GH77 459 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 B3GNT9Q6UX72 402 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 EXT2Q93063 718 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 VCX3AQ9NNX9 186 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 MAPTP10636 758 aaKnown RBP13.76□□□□□ -0.21
NFKB1-202ENST00000394820 SERPINB5P36952 375 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 FOXD4Q12950 439 aaPredicted RBP13.76□□□□□ -0.21
NFKB1-202ENST00000394820 MAMLD1Q13495 774 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 ACSBG2Q5FVE4 666 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 ATG16L1Q676U5 607 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 UNC45BQ8IWX7 931 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 ZNF516Q92618 1163 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 RNF34Q969K3 372 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 TMA16Q96EY4 203 aaKnown RBP13.76□□□□□ -0.21
NFKB1-202ENST00000394820 L3MBTL3Q96JM7 780 aaPredicted RBP13.76□□□□□ -0.21
NFKB1-202ENST00000394820 CADM1Q9BY67 442 aaKnown RBP13.76□□□□□ -0.21
NFKB1-202ENST00000394820 TJP2Q9UDY2 1190 aa13.76□□□□□ -0.21
NFKB1-202ENST00000394820 NOCTQ9UK39 431 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms