RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 ITGB3P05106 788 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 SESN2P58004 480 aaPredicted RBP12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 TMEM132DQ14C87 1099 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 SLC30A9Q6PML9 568 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 OTOAQ7RTW8 1153 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 APLFQ8IW19 511 aaPredicted RBP12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 CLEC4DQ8WXI8 215 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 CCDC124Q96CT7 223 aaKnown RBP12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 KIF12Q96FN5 646 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 KLHL8Q9P2G9 620 aaPredicted RBP12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 ARHGAP28Q9P2N2 729 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 GRID1Q9ULK0 1009 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 MYPNQ86TC9 1320 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 A0A1W2PPM1 405 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 KPNA7A9QM74 516 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 FCHO1O14526 889 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 DHX15O43143 795 aaKnown RBP12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 BANF1O75531 89 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 C4BPAP04003 597 aaKnown RBP12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 KDELR1P24390 212 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 RFC1P35251 1148 aaPredicted RBP12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 RPL22P35268 128 aaKnown RBP12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 CXCL9Q07325 125 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 KYAT1Q16773 422 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 BBS12Q6ZW61 710 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 POLNQ7Z5Q5 900 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 SPATA24Q86W54 205 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 TDRPQ86YL5 185 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 CNKSR2Q8WXI2 1034 aa12.15□□□□□ -0.46
UBE2D3-209ENST00000394804 RAP1GAPP47736 663 aa12.15□□□□□ -0.47
UBE2D3-209ENST00000394804 CDK16Q00536 496 aa12.15□□□□□ -0.47
UBE2D3-209ENST00000394804 ENPEPQ07075 957 aa12.15□□□□□ -0.47
UBE2D3-209ENST00000394804 FAAP100Q0VG06 881 aa12.15□□□□□ -0.47
UBE2D3-209ENST00000394804 TBCCQ15814 346 aa12.15□□□□□ -0.47
UBE2D3-209ENST00000394804 NBPF20Q3BBV1 942 aa12.15□□□□□ -0.47
UBE2D3-209ENST00000394804 SPOCK2Q92563 424 aa12.15□□□□□ -0.47
UBE2D3-209ENST00000394804 NTPCRQ9BSD7 190 aaKnown RBP12.15□□□□□ -0.47
UBE2D3-209ENST00000394804 XAB2Q9HCS7 855 aaKnown RBP12.15□□□□□ -0.47
UBE2D3-209ENST00000394804 ARHGEF3Q9NR81 526 aa12.15□□□□□ -0.47
UBE2D3-209ENST00000394804 SMYD2Q9NRG4 433 aa12.15□□□□□ -0.47
UBE2D3-209ENST00000394804 PRMT7Q9NVM4 692 aaPredicted RBP12.15□□□□□ -0.47
UBE2D3-209ENST00000394804 G3BP2Q9UN86 482 aaKnown RBP12.15□□□□□ -0.47
UBE2D3-209ENST00000394804 MAGED2Q9UNF1 606 aaPredicted RBP12.15□□□□□ -0.47
UBE2D3-209ENST00000394804 DLEC1Q9Y238 1755 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 NFASCO94856 1347 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 DCAF8L1A6NGE4 600 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 VDRP11473 427 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 CDC25CP30307 473 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 OAZ1P54368 228 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 PRPSAP1Q14558 356 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 FASTKD3Q14CZ7 662 aaKnown RBP12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 GEN1Q17RS7 908 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 SULF1Q8IWU6 871 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 NKD2Q969F2 451 aaPredicted RBP12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 HPDLQ96IR7 371 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 FGD4Q96M96 766 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 SH3GL3Q99963 347 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 TMEM134Q9H6X4 195 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 RPL26L1Q9UNX3 145 aaKnown RBP12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 QSER1Q2KHR3 1735 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 SIGLEC16A6NMB1 481 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 KLHL2O95198 593 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 MAP3K6O95382 1288 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 MIPP30301 263 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 PDK2Q15119 407 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 SLC1A5Q15758 541 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 SPRED3Q2MJR0 410 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 SNX30Q5VWJ9 437 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 RAB3IL1Q8TBN0 382 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 GOLGA8QA0A0J9YX86 632 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 GOLGA8OA6NCC3 632 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 GOLGA8NF8WBI6 632 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 ASMTLO95671 621 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 ASS1P00966 412 aaKnown RBP12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 FOXN2P32314 431 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 DPYSL3Q14195 570 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 RASSF3Q86WH2 238 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 SIX6OS1Q8N1H7 587 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 ARHGAP18Q8N392 663 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 RXFP2Q8WXD0 754 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 FBXL18Q96ME1 805 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 SRPK1Q96SB4 655 aaKnown RBP12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 SMARCAD1Q9H4L7 1026 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 LAMB2P55268 1798 aa12.14□□□□□ -0.47
UBE2D3-209ENST00000394804 ZNF862O60290 1169 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 TSHRP16473 764 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 WDR4P57081 412 aaKnown RBP12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 AP1B1Q10567 949 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 SMAD1Q15797 465 aaKnown RBP12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 KBTBD12Q3ZCT8 623 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 SAMD7Q7Z3H4 446 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 APBB2Q92870 758 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 OXNAD1Q96HP4 312 aaPredicted RBP12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 ADAM7Q9H2U9 754 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 BFARQ9NZS9 450 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 LRCH1Q9Y2L9 728 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 A8MXQ7 604 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 PIAS1O75925 651 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 TTLL4Q14679 1199 aa12.13□□□□□ -0.47
UBE2D3-209ENST00000394804 RABGAP1LQ5R372 815 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms