RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 RASA4BC9J798 803 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 RASA4O43374 803 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 STK10O94804 968 aaKnown RBP16.25■□□□□ 0.19
PTBP1-204ENST00000394601 TJP3O95049 919 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 MBTD1Q05BQ5 628 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 PIGHQ14442 188 aaPredicted RBP16.25■□□□□ 0.19
PTBP1-204ENST00000394601 SEPT7Q16181 437 aaKnown RBP16.25■□□□□ 0.19
PTBP1-204ENST00000394601 SMYD5Q6GMV2 418 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 DNAJC24Q6P3W2 148 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 PLPPR4Q7Z2D5 763 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 POLNQ7Z5Q5 900 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 SLC25A41Q8N5S1 370 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 GBP7Q8N8V2 638 aaPredicted RBP16.25■□□□□ 0.19
PTBP1-204ENST00000394601 TMEM35BQ8NCS4 154 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 TWNKQ96RR1 684 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 NDNQ99608 321 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 IMPG2Q9BZV3 1241 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 GALNT8Q9NY28 637 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 SAE1Q9UBE0 346 aaPredicted RBP16.25■□□□□ 0.19
PTBP1-204ENST00000394601 HMGXB4Q9UGU5 601 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 PLXNA1Q9UIW2 1896 aa16.25■□□□□ 0.19
PTBP1-204ENST00000394601 A0A0G2JLL6 359 aaPredicted RBP16.24■□□□□ 0.19
PTBP1-204ENST00000394601 C2orf71A6NGG8 1288 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 HNRNPRO43390 633 aaKnown RBP16.24■□□□□ 0.19
PTBP1-204ENST00000394601 RAP1GAPP47736 663 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 ARSEP51690 589 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 TMED1Q13445 227 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 TAF1BQ53T94 588 aaPredicted RBP16.24■□□□□ 0.19
PTBP1-204ENST00000394601 CYP4V2Q6ZWL3 525 aaPredicted RBP16.24■□□□□ 0.19
PTBP1-204ENST00000394601 PRRT2Q7Z6L0 340 aaPredicted RBP16.24■□□□□ 0.19
PTBP1-204ENST00000394601 TRABD2AQ86V40 505 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 PPFIBP2Q8ND30 876 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 TMEM121Q9BTD3 319 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 TXLNGQ9NUQ3 528 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 SIGLEC16A6NMB1 481 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 ACKR2O00590 384 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 ALOX15BO15296 676 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 PGK2P07205 417 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 POTEJP0CG39 1038 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 ATF7P17544 494 aaPredicted RBP16.24■□□□□ 0.19
PTBP1-204ENST00000394601 TAC1P20366 129 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 RASSF2P50749 326 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 GPX6P59796 221 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 MXD4Q14582 209 aaPredicted RBP16.24■□□□□ 0.19
PTBP1-204ENST00000394601 MPZL3Q6UWV2 235 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 SCARA5Q6ZMJ2 495 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 PHF12Q96QT6 1004 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 CPXM1Q96SM3 734 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.24■□□□□ 0.19
PTBP1-204ENST00000394601 ASMTLO95671 621 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 CD48P09326 243 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 KPNB1Q14974 876 aaKnown RBP16.24■□□□□ 0.19
PTBP1-204ENST00000394601 AMHR2Q16671 573 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 Q3C1V9 767 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 CDR2LQ86X02 465 aaPredicted RBP16.24■□□□□ 0.19
PTBP1-204ENST00000394601 MYLK4Q86YV6 388 aaPredicted RBP16.24■□□□□ 0.19
PTBP1-204ENST00000394601 PDCD7Q8N8D1 485 aaKnown RBP16.24■□□□□ 0.19
PTBP1-204ENST00000394601 IFT122Q9HBG6 1241 aa16.24■□□□□ 0.19
PTBP1-204ENST00000394601 CLUHO75153 1309 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 ATP6V1G1O75348 118 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 LMNB2Q03252 620 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 MORF4L2Q15014 288 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 MSS51Q4VC12 460 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 MTDHQ86UE4 582 aaKnown RBP16.23■□□□□ 0.19
PTBP1-204ENST00000394601 XYLT1Q86Y38 959 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 C1orf127Q8N9H9 656 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 KLHL23Q8NBE8 558 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 SLC4A11Q8NBS3 891 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 HAUS1Q96CS2 278 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 SMC6Q96SB8 1091 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 C10orf88Q9H8K7 445 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 SAYSD1Q9NPB0 183 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 BANF1O75531 89 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 ERBB2P04626 1255 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 SKIP12755 728 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 ATP5DP30049 168 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 GCLCP48506 637 aaPredicted RBP16.23■□□□□ 0.19
PTBP1-204ENST00000394601 TAP1Q03518 808 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 GPS1Q13098 491 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 MAPK6Q16659 721 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 ZNF699Q32M78 642 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.23■□□□□ 0.193e-6■■□□□ 12.2
PTBP1-204ENST00000394601 NCAPG2Q86XI2 1143 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 TEX9Q8N6V9 391 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 FNIP1Q8TF40 1166 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 ZNF668Q96K58 619 aaPredicted RBP16.23■□□□□ 0.19
PTBP1-204ENST00000394601 FAM167AQ96KS9 214 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 MAGEB18Q96M61 343 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 EFR3BQ9Y2G0 817 aa16.23■□□□□ 0.19
PTBP1-204ENST00000394601 GPR25O00155 361 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 MAGEB2O15479 319 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 GAS2O43903 313 aaKnown RBP16.22■□□□□ 0.19
PTBP1-204ENST00000394601 NEK3P51956 506 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 CDH8P55286 799 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 TFAMQ00059 246 aaKnown RBP16.22■□□□□ 0.19
PTBP1-204ENST00000394601 SLC5A9Q2M3M2 681 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 ATF7IP2Q5U623 682 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 FOXB2Q5VYV0 432 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 ANKRD22Q5VYY1 191 aa16.22■□□□□ 0.19
PTBP1-204ENST00000394601 GSTA5Q7RTV2 222 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms