RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 GALK1P51570 392 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 IFI35P80217 286 aaPredicted RBP5.93□□□□□ -1.46
RFFL-202ENST00000394597 TSPY1Q01534 308 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 TAP1Q03518 808 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 CNGA3Q16281 694 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 MEA1Q16626 185 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 NFIL3Q16649 462 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 ANO7Q6IWH7 933 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 C6orf89Q6UWU4 347 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 MARK2Q7KZI7 788 aaKnown RBP5.93□□□□□ -1.46
RFFL-202ENST00000394597 ZNF571Q7Z3V5 609 aaPredicted RBP5.93□□□□□ -1.46
RFFL-202ENST00000394597 ZNF410Q86VK4 478 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 RFX6Q8HWS3 928 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 TTC16Q8NEE8 873 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 DDHD1Q8NEL9 900 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 URGCPQ8TCY9 931 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 DHX38Q92620 1227 aaKnown RBP5.93□□□□□ -1.46
RFFL-202ENST00000394597 CENPTQ96BT3 561 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 CPB2Q96IY4 423 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 THTPAQ9BU02 230 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 NMRK2Q9NPI5 230 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 ASNSD1Q9NWL6 643 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 USP20Q9Y2K6 914 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 SLC45A1Q9Y2W3 748 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 SYNGAP1Q96PV0 1343 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 MAST2Q6P0Q8 1798 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 SYNJ2BP-COX16A0A087WUM0 186 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 CSDE1O75534 798 aaKnown RBP5.93□□□□□ -1.46
RFFL-202ENST00000394597 ITGB3P05106 788 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 CCDC166P0CW27 439 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 PTPN4P29074 926 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 EEF1DP29692 281 aaKnown RBP5.93□□□□□ -1.46
RFFL-202ENST00000394597 SSTR3P32745 418 aaPredicted RBP5.93□□□□□ -1.46
RFFL-202ENST00000394597 KDSRQ06136 332 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 IFRD2Q12894 506 aaPredicted RBP5.93□□□□□ -1.46
RFFL-202ENST00000394597 FSCN1Q16658 493 aaKnown RBP5.93□□□□□ -1.46
RFFL-202ENST00000394597 DEFB115Q30KQ5 88 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 DUSP28Q4G0W2 176 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 ANKRD20A4Q4UJ75 823 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 CBWD6Q4V339 395 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 CBWD3Q5JTY5 395 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 CBWD5Q5RIA9 395 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 ACAD10Q6JQN1 1059 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 C12orf56Q8IXR9 622 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 TNIP3Q96KP6 325 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 MTMR12Q9C0I1 747 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 ST6GALNAC4Q9H4F1 302 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 PARVBQ9HBI1 364 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 CNGB3Q9NQW8 809 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 SLC38A7Q9NVC3 462 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 NMRK1Q9NWW6 199 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 DPP3Q9NY33 737 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 COX16Q9P0S2 106 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 WDR37Q9Y2I8 494 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 RPS6KL1Q9Y6S9 549 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 MYO5AQ9Y4I1 1855 aaKnown RBP5.93□□□□□ -1.46
RFFL-202ENST00000394597 MYH6P13533 1939 aa5.93□□□□□ -1.46
RFFL-202ENST00000394597 BRWD3Q6RI45 1802 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 B2RBV5 119 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 GPR182O15218 404 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 ZNF862O60290 1169 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 TJP3O95049 919 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 VAV1P15498 845 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 ALOX15P16050 662 aaPredicted RBP5.92□□□□□ -1.46
RFFL-202ENST00000394597 SLC1A1P43005 524 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 CPA2P48052 419 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 NOGQ13253 232 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 CAPSQ13938 189 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 DHX34Q14147 1143 aaKnown RBP5.92□□□□□ -1.46
RFFL-202ENST00000394597 KYNUQ16719 465 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 TBC1D25Q3MII6 688 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 GJC2Q5T442 439 aaPredicted RBP5.92□□□□□ -1.46
RFFL-202ENST00000394597 TMC3Q7Z5M5 1100 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 FAM228AQ86W67 206 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 BRSK2Q8IWQ3 736 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 CTAGE3PQ8IX95 158 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 PPTC7Q8NI37 304 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 DNAJB3Q8WWF6 145 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 BRI3BPQ8WY22 251 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 PPP2R3CQ969Q6 453 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 C18orf8Q96DM3 657 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 SYT15Q9BQS2 421 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 ERP44Q9BS26 406 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 NT5C1AQ9BXI3 368 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 UBQLN1Q9UMX0 589 aaKnown RBP5.92□□□□□ -1.46
RFFL-202ENST00000394597 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.92□□□□□ -1.46
RFFL-202ENST00000394597 NRCAMQ92823 1304 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 TMEM88BA6NKF7 163 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 H7C0C1 242 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 CBX6O95503 412 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 GZMAP12544 262 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 CYP11B1P15538 503 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 THPOP40225 353 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 ATP5OP48047 213 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 PPP3CAQ08209 521 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 TAF2Q6P1X5 1199 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 B3GNT6Q6ZMB0 384 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 CCDC117Q8IWD4 279 aaPredicted RBP5.92□□□□□ -1.46
RFFL-202ENST00000394597 RHOT1Q8IXI2 618 aa5.92□□□□□ -1.46
RFFL-202ENST00000394597 PALM2Q8IXS6 379 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms