RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 EIF3EP60228 445 aaKnown RBP26.8■■□□□ 1.88
SMARCD3-203ENST00000392811 USP6NLQ92738 828 aa26.8■■□□□ 1.88
SMARCD3-203ENST00000392811 ZNF317Q96PQ6 595 aaPredicted RBP26.8■■□□□ 1.88
SMARCD3-203ENST00000392811 RNF39Q9H2S5 420 aa26.8■■□□□ 1.88
SMARCD3-203ENST00000392811 GGA2Q9UJY4 613 aa26.8■■□□□ 1.88
SMARCD3-203ENST00000392811 FARP1Q9Y4F1 1045 aaPredicted RBP26.8■■□□□ 1.88
SMARCD3-203ENST00000392811 TRIP12Q14669 1992 aaPredicted RBP26.79■■□□□ 1.88
SMARCD3-203ENST00000392811 A8MXQ7 604 aa26.79■■□□□ 1.88
SMARCD3-203ENST00000392811 PIRO00625 290 aa26.79■■□□□ 1.88
SMARCD3-203ENST00000392811 DPYSL4O14531 572 aa26.79■■□□□ 1.88
SMARCD3-203ENST00000392811 CYP2B6P20813 491 aa26.79■■□□□ 1.88
SMARCD3-203ENST00000392811 ATP11AP98196 1134 aa26.79■■□□□ 1.88
SMARCD3-203ENST00000392811 SLC6A3Q01959 620 aa26.79■■□□□ 1.88
SMARCD3-203ENST00000392811 TAF1CQ15572 869 aaPredicted RBP26.79■■□□□ 1.88
SMARCD3-203ENST00000392811 HP1BP3Q5SSJ5 553 aaPredicted RBP26.79■■□□□ 1.88
SMARCD3-203ENST00000392811 UBXN11Q5T124 520 aa26.79■■□□□ 1.88
SMARCD3-203ENST00000392811 CPLX4Q7Z7G2 160 aa26.79■■□□□ 1.88
SMARCD3-203ENST00000392811 UNC45BQ8IWX7 931 aa26.79■■□□□ 1.88
SMARCD3-203ENST00000392811 SCUBE3Q8IX30 993 aa26.79■■□□□ 1.88
SMARCD3-203ENST00000392811 KHSRPQ92945 711 aaKnown RBP eCLIP26.79■■□□□ 1.88
SMARCD3-203ENST00000392811 TTC25Q96NG3 672 aa26.79■■□□□ 1.88
SMARCD3-203ENST00000392811 PRMT1Q99873 361 aaKnown RBP26.79■■□□□ 1.88
SMARCD3-203ENST00000392811 NAALADL1Q9UQQ1 740 aa26.79■■□□□ 1.88
SMARCD3-203ENST00000392811 A0A087WUV0 522 aaPredicted RBP26.78■■□□□ 1.88
SMARCD3-203ENST00000392811 CDH16O75309 829 aa26.78■■□□□ 1.88
SMARCD3-203ENST00000392811 RPL22P35268 128 aaKnown RBP26.78■■□□□ 1.88
SMARCD3-203ENST00000392811 CTCFP49711 727 aaPredicted RBP26.78■■□□□ 1.88
SMARCD3-203ENST00000392811 FBXO47Q5MNV8 452 aa26.78■■□□□ 1.88
SMARCD3-203ENST00000392811 ARHGAP17Q68EM7 881 aa26.78■■□□□ 1.88
SMARCD3-203ENST00000392811 VSTM1Q6UX27 236 aa26.78■■□□□ 1.88
SMARCD3-203ENST00000392811 PCGF5Q86SE9 256 aa26.78■■□□□ 1.88
SMARCD3-203ENST00000392811 AP5M1Q9H0R1 490 aa26.78■■□□□ 1.88
SMARCD3-203ENST00000392811 TBK1Q9UHD2 729 aa26.78■■□□□ 1.88
SMARCD3-203ENST00000392811 PAPSS1O43252 624 aaPredicted RBP26.78■■□□□ 1.88
SMARCD3-203ENST00000392811 CD4P01730 458 aa26.78■■□□□ 1.88
SMARCD3-203ENST00000392811 DPYSL3Q14195 570 aa26.78■■□□□ 1.88
SMARCD3-203ENST00000392811 SESTD1Q86VW0 696 aa26.78■■□□□ 1.88
SMARCD3-203ENST00000392811 KBTBD7Q8WVZ9 684 aa26.78■■□□□ 1.88
SMARCD3-203ENST00000392811 MAK16Q9BXY0 300 aaKnown RBP26.78■■□□□ 1.88
SMARCD3-203ENST00000392811 CCDC134Q9H6E4 229 aa26.78■■□□□ 1.88
SMARCD3-203ENST00000392811 EURLQ9NYK6 297 aa26.78■■□□□ 1.88
SMARCD3-203ENST00000392811 TMEM120BA0PK00 339 aa26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 MCF2LO15068 1137 aa26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 SPTLC1O15269 473 aa26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 ALOX15BO15296 676 aa26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 FGFR1P11362 822 aa26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 NPNTQ6UXI9 565 aa26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 CENPUQ71F23 418 aa26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 PPIL6Q8IXY8 311 aa26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 SPATA18Q8TC71 538 aa26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 CPT1BQ92523 772 aa26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 SEC16BQ96JE7 1060 aa26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 B3GNT5Q9BYG0 378 aa26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 NGRNQ9NPE2 291 aaKnown RBP26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 GOLGA8MH3BSY2 632 aa26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 PDGFRBP09619 1106 aa26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 RBP3P10745 1247 aa26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 ANKRD22Q5VYY1 191 aa26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 SCYL2Q6P3W7 929 aa26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 C6orf89Q6UWU4 347 aa26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 RASAL3Q86YV0 1011 aa26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 ZBED8Q8IZ13 594 aa26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 C7orf31Q8N865 590 aa26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 FAM71DQ8N9W8 422 aa26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 STK32AQ8WU08 396 aa26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 FAM172AQ8WUF8 416 aa26.77■■□□□ 1.88
SMARCD3-203ENST00000392811 KPNA7A9QM74 516 aa26.76■■□□□ 1.87
SMARCD3-203ENST00000392811 KIAA0754O94854 1291 aa26.76■■□□□ 1.87
SMARCD3-203ENST00000392811 KCNE1P15382 129 aa26.76■■□□□ 1.87
SMARCD3-203ENST00000392811 SDC4P31431 198 aa26.76■■□□□ 1.87
SMARCD3-203ENST00000392811 IFNAR2P48551 515 aa26.76■■□□□ 1.87
SMARCD3-203ENST00000392811 GAD2Q05329 585 aa26.76■■□□□ 1.87
SMARCD3-203ENST00000392811 PDIA2Q13087 525 aaKnown RBP26.76■■□□□ 1.87
SMARCD3-203ENST00000392811 XKR4Q5GH76 650 aa26.76■■□□□ 1.87
SMARCD3-203ENST00000392811 C17orf102A2RUQ5 167 aa26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 CCDC130P13994 396 aa26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 LMO2P25791 158 aa26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 MAGEA9P43362 315 aa26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 CRYBB1P53674 252 aaPredicted RBP26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 SOX4Q06945 474 aaPredicted RBP26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 TFDP2Q14188 446 aa26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 KRT81Q14533 505 aa26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 NOMO1Q15155 1222 aa26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 NAT8LQ8N9F0 302 aa26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 ZNF560Q96MR9 790 aa26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 GOLGA2P5Q9HBQ8 144 aa26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 GPATCH2LQ9NWQ4 482 aa26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 EXOC1LA0A1B0GW35 172 aa26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 ADORA2BP29275 332 aa26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 GNL1P36915 607 aaPredicted RBP26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 SNX16P57768 344 aa26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 IFT88Q13099 833 aa26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 HIF1AQ16665 826 aa26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 ZNF618Q5T7W0 954 aa26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 GKAP1Q5VSY0 366 aaPredicted RBP26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 YTHDF3Q7Z739 585 aaKnown RBP26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 CRYBG2Q8N1P7 616 aa26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 TAB3Q8N5C8 712 aaPredicted RBP26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 MGARPQ8TDB4 240 aa26.75■■□□□ 1.87
SMARCD3-203ENST00000392811 RNF157Q96PX1 679 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms