RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 KAT5Q92993 513 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 CINPQ9BW66 212 aaPredicted RBP17.23■□□□□ 0.35
SCN3B-202ENST00000392770 RGPD1P0DJD0 1748 aa17.23■□□□□ 0.35
SCN3B-202ENST00000392770 CES2O00748 559 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 PPFIA2O75334 1257 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 NT5DC3Q86UY8 548 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 GFAPP14136 432 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 PLPPR4Q7Z2D5 763 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 DCUN1D1Q96GG9 259 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 DDX27Q96GQ7 796 aaKnown RBP17.22■□□□□ 0.35
SCN3B-202ENST00000392770 DCLK3Q9C098 648 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 ANXA9O76027 345 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 SMIM10L2AP0DMW4 78 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 SMIM10L2BP0DMW5 78 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 CYP2F1P24903 491 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 ZNF268Q14587 947 aaPredicted RBP17.22■□□□□ 0.35
SCN3B-202ENST00000392770 MORF4L2Q15014 288 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 MROH9Q5TGP6 573 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 MIB1Q86YT6 1006 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 ZNF263O14978 683 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 NDUFS3O75489 264 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 TRPA1O75762 1119 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 MYL2P10916 166 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 ERMARDQ5T6L9 678 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 MDM1Q8TC05 714 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 VCPIP1Q96JH7 1222 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 RPRD1AQ96P16 312 aaPredicted RBP17.22■□□□□ 0.35
SCN3B-202ENST00000392770 AAASQ9NRG9 546 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 TAS2R14Q9NYV8 317 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 PCDHA3Q9Y5H8 950 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 LRP6O75581 1613 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 IGKV6D-41A0A0C4DH26 115 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 CCDC130P13994 396 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 SLC11A2P49281 568 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 ADIGQ0VDE8 80 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 TWF1Q12792 350 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 CALML6Q8TD86 181 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 PBXIP1Q96AQ6 731 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 TMEM169Q96HH4 297 aa17.22■□□□□ 0.35
SCN3B-202ENST00000392770 PYGMP11217 842 aa17.21■□□□□ 0.35
SCN3B-202ENST00000392770 ANO5Q75V66 913 aa17.21■□□□□ 0.35
SCN3B-202ENST00000392770 FAM161BQ96MY7 647 aa17.21■□□□□ 0.35
SCN3B-202ENST00000392770 TLR10Q9BXR5 811 aa17.21■□□□□ 0.35
SCN3B-202ENST00000392770 TRIM54Q9BYV2 358 aa17.21■□□□□ 0.35
SCN3B-202ENST00000392770 GIPC2Q8TF65 315 aa17.21■□□□□ 0.35
SCN3B-202ENST00000392770 NCLNQ969V3 563 aa17.21■□□□□ 0.35
SCN3B-202ENST00000392770 USP15Q9Y4E8 981 aaPredicted RBP17.21■□□□□ 0.35
SCN3B-202ENST00000392770 SLC15A5A6NIM6 579 aa17.21■□□□□ 0.35
SCN3B-202ENST00000392770 F5H5T6 163 aa17.21■□□□□ 0.35
SCN3B-202ENST00000392770 H0Y626 953 aa17.21■□□□□ 0.35
SCN3B-202ENST00000392770 GJB6O95452 261 aa17.21■□□□□ 0.35
SCN3B-202ENST00000392770 HOXC6P09630 235 aa17.21■□□□□ 0.35
SCN3B-202ENST00000392770 ST8SIA6P61647 398 aa17.21■□□□□ 0.35
SCN3B-202ENST00000392770 BMT2Q1RMZ1 405 aa17.21■□□□□ 0.35
SCN3B-202ENST00000392770 SPATA20Q8TB22 786 aa17.21■□□□□ 0.35
SCN3B-202ENST00000392770 ACO2Q99798 780 aaKnown RBP17.21■□□□□ 0.35
SCN3B-202ENST00000392770 RGPD5Q99666 1765 aa17.21■□□□□ 0.35
SCN3B-202ENST00000392770 ESRRBO95718 433 aa17.21■□□□□ 0.35
SCN3B-202ENST00000392770 TNFSF9P41273 254 aa17.21■□□□□ 0.35
SCN3B-202ENST00000392770 SEC16BQ96JE7 1060 aa17.21■□□□□ 0.35
SCN3B-202ENST00000392770 CYP4F11Q9HBI6 524 aa17.21■□□□□ 0.35
SCN3B-202ENST00000392770 TMBIM4Q9HC24 238 aa17.21■□□□□ 0.35
SCN3B-202ENST00000392770 KCND1Q9NSA2 647 aa17.21■□□□□ 0.35
SCN3B-202ENST00000392770 PMPCBO75439 489 aa17.21■□□□□ 0.34
SCN3B-202ENST00000392770 TGM2P21980 687 aa17.21■□□□□ 0.34
SCN3B-202ENST00000392770 GEMP55040 296 aa17.21■□□□□ 0.34
SCN3B-202ENST00000392770 EFEMP1Q12805 493 aa17.21■□□□□ 0.34
SCN3B-202ENST00000392770 DEFB128Q7Z7B8 93 aa17.21■□□□□ 0.34
SCN3B-202ENST00000392770 SLC51AQ86UW1 340 aa17.21■□□□□ 0.34
SCN3B-202ENST00000392770 MARCOQ9UEW3 520 aaPredicted RBP17.21■□□□□ 0.34
SCN3B-202ENST00000392770 DMGDHQ9UI17 866 aaKnown RBP17.21■□□□□ 0.34
SCN3B-202ENST00000392770 NRCAMQ92823 1304 aa17.2■□□□□ 0.34
SCN3B-202ENST00000392770 ANP32DO95626 131 aa17.2■□□□□ 0.34
SCN3B-202ENST00000392770 PLA2G4AP47712 749 aa17.2■□□□□ 0.34
SCN3B-202ENST00000392770 RGS9BPQ6ZS82 235 aa17.2■□□□□ 0.34
SCN3B-202ENST00000392770 EGFRP00533 1210 aa17.2■□□□□ 0.34
SCN3B-202ENST00000392770 CUL3Q13618 768 aa17.2■□□□□ 0.34
SCN3B-202ENST00000392770 ZNF280DQ6N043 979 aa17.2■□□□□ 0.34
SCN3B-202ENST00000392770 ZDHHC17Q8IUH5 632 aa17.2■□□□□ 0.34
SCN3B-202ENST00000392770 LNX1Q8TBB1 728 aaPredicted RBP17.2■□□□□ 0.34
SCN3B-202ENST00000392770 TNFSF13BQ9Y275 285 aa17.2■□□□□ 0.34
SCN3B-202ENST00000392770 OVOS1Q6IE37 1185 aa17.2■□□□□ 0.34
SCN3B-202ENST00000392770 KDM7AQ6ZMT4 941 aa17.2■□□□□ 0.34
SCN3B-202ENST00000392770 MTMR14Q8NCE2 650 aa17.2■□□□□ 0.34
SCN3B-202ENST00000392770 CDC42EP4Q9H3Q1 356 aaKnown RBP17.2■□□□□ 0.34
SCN3B-202ENST00000392770 RNF19AQ9NV58 838 aa17.2■□□□□ 0.34
SCN3B-202ENST00000392770 ADA2Q9NZK5 511 aa17.2■□□□□ 0.34
SCN3B-202ENST00000392770 RIPK3Q9Y572 518 aa17.2■□□□□ 0.34
SCN3B-202ENST00000392770 ENO1P06733 434 aaKnown RBP17.2■□□□□ 0.34
SCN3B-202ENST00000392770 NFICP08651 508 aa17.2■□□□□ 0.34
SCN3B-202ENST00000392770 GRAMD1BQ3KR37 738 aa17.2■□□□□ 0.34
SCN3B-202ENST00000392770 NLGN2Q8NFZ4 835 aa17.2■□□□□ 0.34
SCN3B-202ENST00000392770 RMDN2Q96LZ7 410 aa17.2■□□□□ 0.34
SCN3B-202ENST00000392770 MANSC1Q9H8J5 431 aa17.2■□□□□ 0.34
SCN3B-202ENST00000392770 AVENQ9NQS1 362 aaPredicted RBP17.2■□□□□ 0.34
SCN3B-202ENST00000392770 ASTN2O75129 1339 aaPredicted RBP17.2■□□□□ 0.34
SCN3B-202ENST00000392770 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.2■□□□□ 0.34
SCN3B-202ENST00000392770 PRKCIP41743 596 aa17.2■□□□□ 0.34
SCN3B-202ENST00000392770 ZNF177Q13360 481 aaPredicted RBP17.2■□□□□ 0.34
SCN3B-202ENST00000392770 WDR59Q6PJI9 974 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms