RNA–Protein interactions for RNA: ENST00000392590.3

CDCA4-202, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-202ENST00000392590 FKBP15Q5T1M5 1219 aa21.91■■□□□ 1.1
CDCA4-202ENST00000392590 PDZD8Q8NEN9 1154 aa21.91■■□□□ 1.1
CDCA4-202ENST00000392590 TFAP2BQ92481 460 aa21.91■■□□□ 1.1
CDCA4-202ENST00000392590 SMG9Q9H0W8 520 aaKnown RBP21.91■■□□□ 1.1
CDCA4-202ENST00000392590 HSD3B7Q9H2F3 369 aa21.91■■□□□ 1.1
CDCA4-202ENST00000392590 CHORDC1Q9UHD1 332 aaPredicted RBP21.91■■□□□ 1.1
CDCA4-202ENST00000392590 DNAJC12Q9UKB3 198 aa21.91■■□□□ 1.1
CDCA4-202ENST00000392590 TRAV19A0A0A6YYK7 116 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 FAM86C2PA6NEL3 165 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 TMEM221A6NGB7 291 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 M0R296 226 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 GPR37L1O60883 481 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 CFHP08603 1231 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 PSMC3P17980 439 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 ZNF132P52740 706 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 COPB1P53618 953 aaKnown RBP21.9■■□□□ 1.1
CDCA4-202ENST00000392590 ZSCAN23Q3MJ62 389 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 TMEM31Q5JXX7 168 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 VITQ6UXI7 678 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 MFSD6LQ8IWD5 586 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 DHX40Q8IX18 779 aaKnown RBP21.9■■□□□ 1.1
CDCA4-202ENST00000392590 OVCA2Q8WZ82 227 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 CYP2S1Q96SQ9 504 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 TRMT61BQ9BVS5 477 aaKnown RBP21.9■■□□□ 1.1
CDCA4-202ENST00000392590 UBXN6Q9BZV1 441 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 SLC2A4RGQ9NR83 387 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 FBXL21Q9UKT6 434 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 FAM92AA1XBS5 289 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 C2orf78A6NCI8 922 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 LRRC10BA6NIK2 292 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 BECN2A8MW95 431 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 O00370 1275 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 PRAMEF12O95522 483 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 HDCP19113 662 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 USP8P40818 1118 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 GRM2Q14416 872 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 CNGA2Q16280 664 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 LCLAT1Q6UWP7 414 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 GPRIN1Q7Z2K8 1008 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 TTC30AQ86WT1 665 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 CELF5Q8N6W0 485 aaKnown RBP21.9■■□□□ 1.1
CDCA4-202ENST00000392590 DEPDC1BQ8WUY9 529 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 RSPRY1Q96DX4 576 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 ASIC4Q96FT7 647 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 C11orf16Q9NQ32 467 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 OBP2AQ9NY56 170 aa21.9■■□□□ 1.1
CDCA4-202ENST00000392590 PTPRDP23468 1912 aa21.89■■□□□ 1.09
CDCA4-202ENST00000392590 CALCAP01258 141 aa21.89■■□□□ 1.09
CDCA4-202ENST00000392590 USP17L7P0C7H9 530 aa21.89■■□□□ 1.09
CDCA4-202ENST00000392590 BRD2P25440 801 aaKnown RBP21.89■■□□□ 1.09
CDCA4-202ENST00000392590 PDE6CP51160 858 aa21.89■■□□□ 1.09
CDCA4-202ENST00000392590 BCAT1P54687 386 aa21.89■■□□□ 1.09
CDCA4-202ENST00000392590 STILQ15468 1287 aa21.89■■□□□ 1.09
CDCA4-202ENST00000392590 NFKBIBQ15653 356 aa21.89■■□□□ 1.09
CDCA4-202ENST00000392590 DPY19L2P1Q6NXN4 242 aa21.89■■□□□ 1.09
CDCA4-202ENST00000392590 YAF2Q8IY57 180 aa21.89■■□□□ 1.09
CDCA4-202ENST00000392590 ARL14EPQ8N8R7 260 aaPredicted RBP21.89■■□□□ 1.09
CDCA4-202ENST00000392590 UBA3Q8TBC4 463 aa21.89■■□□□ 1.09
CDCA4-202ENST00000392590 LSM14BQ9BX40 385 aaKnown RBP21.89■■□□□ 1.09
CDCA4-202ENST00000392590 TDP1Q9NUW8 608 aa21.89■■□□□ 1.09
CDCA4-202ENST00000392590 WNT16Q9UBV4 365 aa21.89■■□□□ 1.09
CDCA4-202ENST00000392590 MYO10Q9HD67 2058 aa21.88■■□□□ 1.09
CDCA4-202ENST00000392590 CKMP06732 381 aa21.88■■□□□ 1.09
CDCA4-202ENST00000392590 PFKLP17858 780 aa21.88■■□□□ 1.09
CDCA4-202ENST00000392590 PFKPQ01813 784 aa21.88■■□□□ 1.09
CDCA4-202ENST00000392590 PDE4CQ08493 712 aa21.88■■□□□ 1.09
CDCA4-202ENST00000392590 BST2Q10589 180 aaKnown RBP21.88■■□□□ 1.09
CDCA4-202ENST00000392590 KLHDC7AQ5VTJ3 777 aa21.88■■□□□ 1.09
CDCA4-202ENST00000392590 PIGZQ86VD9 579 aa21.88■■□□□ 1.09
CDCA4-202ENST00000392590 SHC3Q92529 594 aa21.88■■□□□ 1.09
CDCA4-202ENST00000392590 USP13Q92995 863 aaPredicted RBP21.88■■□□□ 1.09
CDCA4-202ENST00000392590 LRRC3BQ96PB8 259 aa21.88■■□□□ 1.09
CDCA4-202ENST00000392590 SLC22A12Q96S37 553 aa21.88■■□□□ 1.09
CDCA4-202ENST00000392590 ZSWIM1Q9BR11 485 aa21.88■■□□□ 1.09
CDCA4-202ENST00000392590 GMIPQ9P107 970 aa21.88■■□□□ 1.09
CDCA4-202ENST00000392590 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.88■■□□□ 1.09
CDCA4-202ENST00000392590 SCML2Q9UQR0 700 aa21.88■■□□□ 1.09
CDCA4-202ENST00000392590 NCANO14594 1321 aa21.87■■□□□ 1.09
CDCA4-202ENST00000392590 XPO1O14980 1071 aaKnown RBP21.87■■□□□ 1.09
CDCA4-202ENST00000392590 ATP1A3P13637 1013 aa21.87■■□□□ 1.09
CDCA4-202ENST00000392590 GDI1P31150 447 aa21.87■■□□□ 1.09
CDCA4-202ENST00000392590 KIF11P52732 1056 aa21.87■■□□□ 1.09
CDCA4-202ENST00000392590 IQCB1Q15051 598 aa21.87■■□□□ 1.09
CDCA4-202ENST00000392590 SMYD5Q6GMV2 418 aa21.87■■□□□ 1.09
CDCA4-202ENST00000392590 BPIFB1Q8TDL5 484 aa21.87■■□□□ 1.09
CDCA4-202ENST00000392590 BRD9Q9H8M2 597 aa21.87■■□□□ 1.09
CDCA4-202ENST00000392590 AJAP1Q9UKB5 411 aaPredicted RBP21.87■■□□□ 1.09
CDCA4-202ENST00000392590 CCL26Q9Y258 94 aa21.87■■□□□ 1.09
CDCA4-202ENST00000392590 LGALS16A8MUM7 142 aa21.86■■□□□ 1.09
CDCA4-202ENST00000392590 PRR33A8MZF0 331 aa21.86■■□□□ 1.09
CDCA4-202ENST00000392590 ZNF263O14978 683 aa21.86■■□□□ 1.09
CDCA4-202ENST00000392590 CAVIN2O95810 425 aa21.86■■□□□ 1.09
CDCA4-202ENST00000392590 ZDHHC11BP0C7U3 371 aa21.86■■□□□ 1.09
CDCA4-202ENST00000392590 SETSIPP0DME0 302 aa21.86■■□□□ 1.09
CDCA4-202ENST00000392590 ZNF268Q14587 947 aaPredicted RBP21.86■■□□□ 1.09
CDCA4-202ENST00000392590 PKDCCQ504Y2 493 aa21.86■■□□□ 1.09
CDCA4-202ENST00000392590 SNX30Q5VWJ9 437 aa21.86■■□□□ 1.09
CDCA4-202ENST00000392590 IRF7Q92985 503 aa21.86■■□□□ 1.09
CDCA4-202ENST00000392590 PBXIP1Q96AQ6 731 aa21.86■■□□□ 1.09
CDCA4-202ENST00000392590 KIF9Q9HAQ2 790 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms