RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 ERVK-21P61565 698 aa1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 TMPRSS15P98073 1019 aa1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 DSC2Q02487 901 aa1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 FAPQ12884 760 aa1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 E2F2Q14209 437 aa1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 SF3B4Q15427 424 aaKnown RBP eCLIP1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 PRTGQ2VWP7 1150 aa1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 ZNF750Q32MQ0 723 aa1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 CCDC144BQ3MJ40 725 aa1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 SLC9C1Q4G0N8 1177 aa1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 LCE3CQ5T5A8 94 aa1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 DEPDC1Q5TB30 811 aa1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 TMEM65Q6PI78 240 aa1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 RANBP10Q6VN20 620 aa1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 UBE2Q1Q7Z7E8 422 aa1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 KIAA0907Q7Z7F0 614 aaPredicted RBP1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 CAND1Q86VP6 1230 aaKnown RBP1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 SFTPA1Q8IWL2 248 aa1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 LMO3Q8TAP4 145 aa1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 JADE3Q92613 823 aa1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 ATP2A3Q93084 1043 aa1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 MED30Q96HR3 178 aa1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 MAN1C1Q9NR34 630 aa1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 PLSCR4Q9NRQ2 329 aa1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 NCKIPSDQ9NZQ3 722 aa1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 AMFRQ9UKV5 643 aa1.94□□□□□ -2.1
RNU6-239P-201ENST00000390990 EVPLQ92817 2033 aa1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 FOXN3O00409 490 aaPredicted RBP1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 CTIFO43310 598 aaKnown RBP1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 SOCS5O75159 536 aa1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 CDC45O75419 566 aa1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 NDUFB8O95169 186 aa1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 EPN2O95208 641 aa1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 APEHP13798 732 aaKnown RBP1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 HOXB2P14652 356 aa1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 ATF7P17544 494 aaPredicted RBP1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 TCEA1P23193 301 aaKnown RBP1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 CPA2P48052 419 aa1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 B4GALNT1Q00973 533 aa1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 LTBQ06643 244 aa1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 LMAN2Q12907 356 aa1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 STIM1Q13586 685 aa1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 LARS2Q15031 903 aaKnown RBP1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 IQCB1Q15051 598 aa1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 CLUL1Q15846 466 aa1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 ODF3L2Q3SX64 289 aa1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 B4GALNT4Q76KP1 1039 aa1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 FBXL14Q8N1E6 418 aa1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 IQCF1Q8N6M8 205 aa1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 SIRT6Q8N6T7 355 aa1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 COG1Q8WTW3 980 aa1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 OSCP1Q8WVF1 389 aa1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 TNPO1Q92973 898 aaKnown RBP1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 NTPCRQ9BSD7 190 aaKnown RBP1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 ST6GALNAC1Q9NSC7 600 aaPredicted RBP1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 ICAM5Q9UMF0 924 aa1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 PCDHA7Q9UN72 937 aa1.93□□□□□ -2.1
RNU6-239P-201ENST00000390990 TRIM75PA6NK02 468 aa1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 ZNF814B7Z6K7 855 aa1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 CES2O00748 559 aa1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 EYA4O95677 639 aa1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 SYF2O95926 243 aaKnown RBP1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 GNAI2P04899 355 aa1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 IL6STP40189 918 aaPredicted RBP1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 FXR1P51114 621 aaKnown RBP eCLIP1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 PDE6CP51160 858 aa1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 SLC16A1P53985 500 aa1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 GAS1P54826 345 aa1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 P2RX3P56373 397 aa1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 DDR1Q08345 913 aa1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 MRGPRG-AS1Q2M3A8 158 aa1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 C4orf46Q504U0 113 aa1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 PPP4R3AQ6IN85 833 aa1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 TTC7BQ86TV6 843 aa1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 AMOTL1Q8IY63 956 aa1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 ABRAQ8N0Z2 381 aa1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 LINC01465Q8N7H1 131 aa1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 TAF15Q92804 592 aaKnown RBP eCLIP1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 COA7Q96BR5 231 aa1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 MRPL46Q9H2W6 279 aaKnown RBP1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 CXorf36Q9H7Y0 433 aa1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 ZDHHC8Q9ULC8 765 aa1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 PCDHA3Q9Y5H8 950 aa1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 SNX14Q9Y5W7 946 aa1.92□□□□□ -2.1
RNU6-239P-201ENST00000390990 TMEM272A0A1B0GTI8 110 aa1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 ERI2A8K979 691 aaKnown RBP1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 PMPCBO75439 489 aa1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 DDNO94850 711 aaPredicted RBP1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 PAPSS2O95340 614 aaPredicted RBP1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 AHSGP02765 367 aa1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 DIO1P49895 249 aa1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 PPATQ06203 517 aa1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 MYO1EQ12965 1108 aa1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 SF3A1Q15459 793 aaKnown RBP1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 EARS2Q5JPH6 523 aaKnown RBP1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 PDXDC1Q6P996 788 aa1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 ZNF793Q6ZN11 406 aa1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 DCDC5Q6ZRR9 648 aa1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 RFX8Q6ZV50 586 aa1.91□□□□□ -2.1
RNU6-239P-201ENST00000390990 ARHGAP30Q7Z6I6 1101 aaPredicted RBP1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms