RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 CHCHD3Q9NX63 227 aaKnown RBP18.49■□□□□ 0.55
SQSTM1-202ENST00000389805 TLR3O15455 904 aaKnown RBP18.49■□□□□ 0.55
SQSTM1-202ENST00000389805 PROSCO94903 275 aa18.49■□□□□ 0.55
SQSTM1-202ENST00000389805 MYL6P60660 151 aa18.49■□□□□ 0.55
SQSTM1-202ENST00000389805 MOB2Q70IA6 237 aa18.49■□□□□ 0.55
SQSTM1-202ENST00000389805 ZNF677Q86XU0 584 aa18.49■□□□□ 0.55
SQSTM1-202ENST00000389805 ZNF606Q8WXB4 792 aa18.49■□□□□ 0.55
SQSTM1-202ENST00000389805 BRCA1P38398 1863 aaKnown RBP18.49■□□□□ 0.55
SQSTM1-202ENST00000389805 ADM5C9JUS6 153 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 PIGRP01833 764 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 CCDC62Q6P9F0 684 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 SYDE1Q6ZW31 735 aaPredicted RBP18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 RIBC1Q8N443 379 aaPredicted RBP18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 CFAP61Q8NHU2 1237 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 AZIN2Q96A70 460 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 TRIM55Q9BYV6 548 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 SPATC1LQ9H0A9 340 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 VCX3BQ9H321 246 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 VCX3AQ9NNX9 186 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 NRBP2Q9NSY0 501 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 ETNK2Q9NVF9 386 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 RPS6KL1Q9Y6S9 549 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 H3BRJ5 948 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 WEE2P0C1S8 567 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 PTP4A2Q12974 167 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 LIN52Q52LA3 116 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 SH3D19Q5HYK7 790 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 ISLR2Q6UXK2 745 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 KLHL23Q8NBE8 558 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 RNF149Q8NC42 400 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 ACSF2Q96CM8 615 aaPredicted RBP18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 GALNT8Q9NY28 637 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 ZNF212Q9UDV6 495 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 B2RBV5 119 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 OPHN1O60890 802 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 RNASEH1O60930 286 aaKnown RBP18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 KRT10P13645 584 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 NOL9Q5SY16 702 aaKnown RBP18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 SCARA5Q6ZMJ2 495 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 ZCCHC9Q8N567 271 aaKnown RBP18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 HAUS1Q96CS2 278 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 LTBP3Q9NS15 1303 aa18.48■□□□□ 0.55
SQSTM1-202ENST00000389805 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.47■□□□□ 0.55
SQSTM1-202ENST00000389805 MSCO60682 206 aa18.47■□□□□ 0.55
SQSTM1-202ENST00000389805 LDHAP00338 332 aaKnown RBP18.47■□□□□ 0.55
SQSTM1-202ENST00000389805 MAN1A1P33908 653 aa18.47■□□□□ 0.55
SQSTM1-202ENST00000389805 ALYREFQ86V81 257 aaKnown RBP18.47■□□□□ 0.55
SQSTM1-202ENST00000389805 OTUD5Q96G74 571 aa18.47■□□□□ 0.55
SQSTM1-202ENST00000389805 CLMNQ96JQ2 1002 aa18.47■□□□□ 0.55
SQSTM1-202ENST00000389805 MANSC1Q9H8J5 431 aa18.47■□□□□ 0.55
SQSTM1-202ENST00000389805 CSDE1O75534 798 aaKnown RBP18.47■□□□□ 0.55
SQSTM1-202ENST00000389805 DDNO94850 711 aaPredicted RBP18.47■□□□□ 0.55
SQSTM1-202ENST00000389805 ENO1P06733 434 aaKnown RBP18.47■□□□□ 0.55
SQSTM1-202ENST00000389805 PDIA2Q13087 525 aaKnown RBP18.47■□□□□ 0.55
SQSTM1-202ENST00000389805 LIN9Q5TKA1 542 aa18.47■□□□□ 0.55
SQSTM1-202ENST00000389805 THNSL1Q8IYQ7 743 aa18.47■□□□□ 0.55
SQSTM1-202ENST00000389805 SEPT1Q8WYJ6 367 aa18.47■□□□□ 0.55
SQSTM1-202ENST00000389805 COPS5Q92905 334 aa18.47■□□□□ 0.55
SQSTM1-202ENST00000389805 TSSK1BQ9BXA7 367 aa18.47■□□□□ 0.55
SQSTM1-202ENST00000389805 ZWILCHQ9H900 591 aa18.47■□□□□ 0.55
SQSTM1-202ENST00000389805 ELP3Q9H9T3 547 aa18.47■□□□□ 0.55
SQSTM1-202ENST00000389805 FAM189A1O60320 539 aa18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 MAFO75444 373 aaPredicted RBP18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 ANPEPP15144 967 aa18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 SLC1A1P43005 524 aa18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 PSMC4P43686 418 aa18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 INHBCP55103 352 aa18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 DSG1Q02413 1049 aa18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 DEUP1Q05D60 604 aa18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 GPS1Q13098 491 aa18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 RIOX2Q8IUF8 465 aa18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 NMD3Q96D46 503 aaKnown RBP18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 FAM81BQ96LP2 452 aa18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 NMUR2Q9GZQ4 415 aa18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 RHBDL2Q9NX52 303 aa18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 ZNF148Q9UQR1 794 aa18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 SSTR1P30872 391 aa18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 TFAMQ00059 246 aaKnown RBP18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 GAD2Q05329 585 aa18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 KDSRQ06136 332 aa18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 ENPEPQ07075 957 aa18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 LAMTOR4Q0VGL1 99 aa18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 SHKBP1Q8TBC3 707 aa18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 ECSITQ9BQ95 431 aa18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 EBF3Q9H4W6 596 aa18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 TXNRD2Q9NNW7 524 aa18.46■□□□□ 0.55
SQSTM1-202ENST00000389805 HNRNPCL1O60812 293 aaKnown RBP18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 KLF1Q13351 362 aaPredicted RBP18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 MYBPC3Q14896 1274 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 Q3C1V9 767 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 TXNRD3NBQ6F5E7 133 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 PLEKHA7Q6IQ23 1121 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 RHPN2Q8IUC4 686 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 TTC17Q96AE7 1141 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 OSBPL8Q9BZF1 889 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 TMEM134Q9H6X4 195 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 ATXN10Q9UBB4 475 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 FAM237BA0A1B0GVD1 139 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 F8VP50 259 aa18.45■□□□□ 0.54
SQSTM1-202ENST00000389805 FCHO1O14526 889 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms