RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 INHAP05111 366 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 THP07101 528 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 CAPN2P17655 700 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 AARSP49588 968 aaKnown RBP eCLIP10.65□□□□□ -0.7
LTN1-203ENST00000389195 CUL1Q13616 776 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 MTFR1Q15390 333 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 FAXCQ5TGI0 409 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 SDHAF4Q5VUM1 108 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 SYPL2Q5VXT5 272 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 TAF2Q6P1X5 1199 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 OLFML1Q6UWY5 402 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 TMCO2Q7Z6W1 182 aaPredicted RBP10.65□□□□□ -0.7
LTN1-203ENST00000389195 PIGZQ86VD9 579 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 RFX6Q8HWS3 928 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 TP53INP2Q8IXH6 220 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.65□□□□□ -0.7
LTN1-203ENST00000389195 B3GALNT2Q8NCR0 500 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 MDM1Q8TC05 714 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 FAM71BQ8TC56 605 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 ZNF296Q8WUU4 475 aaPredicted RBP10.65□□□□□ -0.7
LTN1-203ENST00000389195 ZNF518BQ9C0D4 1074 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 RAB17Q9H0T7 212 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 CRTAC1Q9NQ79 661 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 HESX1Q9UBX0 185 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 SRRDQ9UH36 339 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 DNAH14Q0VDD8 3507 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 hCG_1818297A0A087WSY0 165 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 PSTPIP1O43586 416 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 CAND2O75155 1236 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 KDELR1P24390 212 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 HSPA9P38646 679 aaKnown RBP10.65□□□□□ -0.7
LTN1-203ENST00000389195 PGFP49763 221 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 NME3Q13232 169 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 BYSLQ13895 437 aaKnown RBP10.65□□□□□ -0.7
LTN1-203ENST00000389195 PIGHQ14442 188 aaPredicted RBP10.65□□□□□ -0.7
LTN1-203ENST00000389195 LONRF1Q17RB8 773 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 PKDCCQ504Y2 493 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 UNC45BQ8IWX7 931 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 CCDC185Q8N715 623 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 FAM71DQ8N9W8 422 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 EXD1Q8NHP7 514 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 GPR152Q8TDT2 470 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 SEC14L1Q92503 715 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 EDEM1Q92611 657 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 MCRS1Q96EZ8 462 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 CEP41Q9BYV8 373 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 TBK1Q9UHD2 729 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 PRG3Q9Y2Y8 225 aaPredicted RBP10.65□□□□□ -0.7
LTN1-203ENST00000389195 Q9Y3F1 56 aa10.65□□□□□ -0.7
LTN1-203ENST00000389195 ZNF638Q14966 1978 aaKnown RBP10.65□□□□□ -0.7
LTN1-203ENST00000389195 TCRBV7S3A2A0A539 114 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 NT5C1B-RDH14C9J2C7 533 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 BHMG1C9JSJ3 638 aaPredicted RBP10.64□□□□□ -0.71
LTN1-203ENST00000389195 PODXLO00592 558 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 NRP1O14786 923 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 TOMM70O94826 608 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 CREB1P16220 341 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 TNFRSF8P28908 595 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 ARSEP51690 589 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 PMS2P54278 862 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 IFI35P80217 286 aaPredicted RBP10.64□□□□□ -0.71
LTN1-203ENST00000389195 GPS1Q13098 491 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 CYP1B1Q16678 543 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 TFDP3Q5H9I0 405 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 DSTYKQ6XUX3 929 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 KLHDC9Q8NEP7 349 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 FAM107BQ9H098 131 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 VIPAS39Q9H9C1 493 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 TMLHEQ9NVH6 421 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 PIH1D1Q9NWS0 290 aaKnown RBP10.64□□□□□ -0.71
LTN1-203ENST00000389195 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.64□□□□□ -0.71
LTN1-203ENST00000389195 SNX10Q9Y5X0 201 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 LIASO43766 372 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 RNF8O76064 485 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 TRUB2O95900 331 aaKnown RBP10.64□□□□□ -0.71
LTN1-203ENST00000389195 GPD1P21695 349 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 HDAC4P56524 1084 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 MGAT3Q09327 533 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 IFFO1Q0D2I5 559 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 DHX34Q14147 1143 aaKnown RBP10.64□□□□□ -0.71
LTN1-203ENST00000389195 KRT71Q3SY84 523 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 DCAF6Q58WW2 860 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 ZNF365Q70YC5 407 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 IPO4Q8TEX9 1081 aaKnown RBP10.64□□□□□ -0.71
LTN1-203ENST00000389195 PCED1BQ96HM7 432 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 MLXIPLQ9NP71 852 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 DNAJB4Q9UDY4 337 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 DDX20Q9UHI6 824 aaKnown RBP10.64□□□□□ -0.71
LTN1-203ENST00000389195 STRIP2Q9ULQ0 834 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 NOVA2Q9UNW9 492 aaKnown RBP10.64□□□□□ -0.71
LTN1-203ENST00000389195 NAALADL1Q9UQQ1 740 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 PTCH2Q9Y6C5 1203 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.64□□□□□ -0.71
LTN1-203ENST00000389195 USP17L7P0C7H9 530 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 CKBP12277 381 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 KCNE1P15382 129 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 PTPN1P18031 435 aaKnown RBP10.64□□□□□ -0.71
LTN1-203ENST00000389195 ZNF268Q14587 947 aaPredicted RBP10.64□□□□□ -0.71
LTN1-203ENST00000389195 ANKRD22Q5VYY1 191 aa10.64□□□□□ -0.71
LTN1-203ENST00000389195 LRRTM3Q86VH5 581 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms