RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 APEHP13798 732 aaKnown RBP1.69□□□□□ -2.14
SNORA40-201ENST00000388090 PKMP14618 531 aaKnown RBP1.69□□□□□ -2.14
SNORA40-201ENST00000388090 ATF7P17544 494 aaPredicted RBP1.69□□□□□ -2.14
SNORA40-201ENST00000388090 TBXAS1P24557 533 aaPredicted RBP1.69□□□□□ -2.14
SNORA40-201ENST00000388090 GTF2F1P35269 517 aaKnown RBP eCLIP1.69□□□□□ -2.14
SNORA40-201ENST00000388090 MLH1P40692 756 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 GPR3P46089 330 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 CPA2P48052 419 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 ALDH7A1P49419 539 aaKnown RBP1.69□□□□□ -2.14
SNORA40-201ENST00000388090 SCAND1P57086 179 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 HSF1Q00613 529 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 POU5F1BQ06416 359 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 SLC4A8Q2Y0W8 1093 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 ARHGAP40Q5TG30 622 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 PRSS57Q6UWY2 283 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 RANBP10Q6VN20 620 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 SLC39A5Q6ZMH5 540 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 ZNF793Q6ZN11 406 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 DPY19L3Q6ZPD9 716 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 LINC01465Q8N7H1 131 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 NINJ1Q92982 152 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 SLC2A13Q96QE2 648 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 PRR25Q96S07 402 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 PTDSS2Q9BVG9 487 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 TANGO6Q9C0B7 1094 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 C6orf106Q9H6K1 298 aaPredicted RBP1.69□□□□□ -2.14
SNORA40-201ENST00000388090 VTA1Q9NP79 307 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 DECR2Q9NUI1 292 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 SIDT1Q9NXL6 827 aaKnown RBP1.69□□□□□ -2.14
SNORA40-201ENST00000388090 CALCOCO1Q9P1Z2 691 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 CFAP97Q9P2B7 532 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 COG5Q9UP83 839 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 PCDHGB1Q9Y5G3 927 aa1.69□□□□□ -2.14
SNORA40-201ENST00000388090 CLEC18AA5D8T8 446 aa1.68□□□□□ -2.14
SNORA40-201ENST00000388090 SRRM3A6NNA2 597 aaPredicted RBP1.68□□□□□ -2.14
SNORA40-201ENST00000388090 NT5C1B-RDH14C9J2C7 533 aa1.68□□□□□ -2.14
SNORA40-201ENST00000388090 TBX6O95947 436 aaPredicted RBP1.68□□□□□ -2.14
SNORA40-201ENST00000388090 SP1P08047 785 aa1.68□□□□□ -2.14
SNORA40-201ENST00000388090 RARBP10826 455 aa1.68□□□□□ -2.14
SNORA40-201ENST00000388090 CYP2C19P33261 490 aa1.68□□□□□ -2.14
SNORA40-201ENST00000388090 IZUMO4Q1ZYL8 232 aa1.68□□□□□ -2.14
SNORA40-201ENST00000388090 INO80DQ53TQ3 878 aaPredicted RBP1.68□□□□□ -2.14
SNORA40-201ENST00000388090 RGS7BPQ6MZT1 257 aaPredicted RBP1.68□□□□□ -2.14
SNORA40-201ENST00000388090 ADAM5Q6NVV9 412 aa1.68□□□□□ -2.14
SNORA40-201ENST00000388090 MEX3BQ6ZN04 569 aaKnown RBP1.68□□□□□ -2.14
SNORA40-201ENST00000388090 TRILQ7L0X0 811 aa1.68□□□□□ -2.14
SNORA40-201ENST00000388090 USP37Q86T82 979 aa1.68□□□□□ -2.14
SNORA40-201ENST00000388090 MYPOPQ86VE0 399 aaPredicted RBP1.68□□□□□ -2.14
SNORA40-201ENST00000388090 MUC20Q8N307 709 aaPredicted RBP1.68□□□□□ -2.14
SNORA40-201ENST00000388090 TMEM199Q8N511 208 aa1.68□□□□□ -2.14
SNORA40-201ENST00000388090 CLEC18CQ8NCF0 446 aa1.68□□□□□ -2.14
SNORA40-201ENST00000388090 MSI2Q96DH6 328 aaKnown RBP1.68□□□□□ -2.14
SNORA40-201ENST00000388090 MFSD3Q96ES6 412 aa1.68□□□□□ -2.14
SNORA40-201ENST00000388090 SLC46A1Q96NT5 459 aa1.68□□□□□ -2.14
SNORA40-201ENST00000388090 SIK2Q9H0K1 926 aa1.68□□□□□ -2.14
SNORA40-201ENST00000388090 RBM38Q9H0Z9 239 aaKnown RBP1.68□□□□□ -2.14
SNORA40-201ENST00000388090 CCM2LQ9NUG4 571 aaPredicted RBP1.68□□□□□ -2.14
SNORA40-201ENST00000388090 MSRB1Q9NZV6 116 aa1.68□□□□□ -2.14
SNORA40-201ENST00000388090 AMFRQ9UKV5 643 aa1.68□□□□□ -2.14
SNORA40-201ENST00000388090 MAGED2Q9UNF1 606 aaPredicted RBP1.68□□□□□ -2.14
SNORA40-201ENST00000388090 SMTNL1A8MU46 457 aa1.67□□□□□ -2.14
SNORA40-201ENST00000388090 PPP1R3DO95685 299 aa1.67□□□□□ -2.14
SNORA40-201ENST00000388090 PAK4O96013 591 aaPredicted RBP1.67□□□□□ -2.14
SNORA40-201ENST00000388090 GM2AP17900 193 aa1.67□□□□□ -2.14
SNORA40-201ENST00000388090 COPB1P53618 953 aaKnown RBP1.67□□□□□ -2.14
SNORA40-201ENST00000388090 DLX5P56178 289 aa1.67□□□□□ -2.14
SNORA40-201ENST00000388090 SOX8P57073 446 aa1.67□□□□□ -2.14
SNORA40-201ENST00000388090 LOXL3P58215 753 aa1.67□□□□□ -2.14
SNORA40-201ENST00000388090 LMAN2Q12907 356 aa1.67□□□□□ -2.14
SNORA40-201ENST00000388090 KIF22Q14807 665 aa1.67□□□□□ -2.14
SNORA40-201ENST00000388090 PTGR1Q14914 329 aa1.67□□□□□ -2.14
SNORA40-201ENST00000388090 ZNF718Q3SXZ3 478 aa1.67□□□□□ -2.14
SNORA40-201ENST00000388090 EARS2Q5JPH6 523 aaKnown RBP1.67□□□□□ -2.14
SNORA40-201ENST00000388090 TMEM65Q6PI78 240 aa1.67□□□□□ -2.14
SNORA40-201ENST00000388090 GADL1Q6ZQY3 521 aa1.67□□□□□ -2.14
SNORA40-201ENST00000388090 SH2D6Q7Z4S9 175 aa1.67□□□□□ -2.14
SNORA40-201ENST00000388090 SRGAP1Q7Z6B7 1085 aa1.67□□□□□ -2.14
SNORA40-201ENST00000388090 CTCFLQ8NI51 663 aaPredicted RBP1.67□□□□□ -2.14
SNORA40-201ENST00000388090 PHF21BQ96EK2 531 aa1.67□□□□□ -2.14
SNORA40-201ENST00000388090 DPCDQ9BVM2 203 aaPredicted RBP1.67□□□□□ -2.14
SNORA40-201ENST00000388090 ZNF277Q9NRM2 450 aaPredicted RBP1.67□□□□□ -2.14
SNORA40-201ENST00000388090 TMEM45AQ9NWC5 275 aa1.67□□□□□ -2.14
SNORA40-201ENST00000388090 GAR1Q9NY12 217 aaKnown RBP1.67□□□□□ -2.14
SNORA40-201ENST00000388090 HESX1Q9UBX0 185 aa1.67□□□□□ -2.14
SNORA40-201ENST00000388090 NDRG4Q9ULP0 352 aaKnown RBP1.67□□□□□ -2.14
SNORA40-201ENST00000388090 A0A1W2PPC1 479 aa1.66□□□□□ -2.14
SNORA40-201ENST00000388090 ATG13O75143 517 aa1.66□□□□□ -2.14
SNORA40-201ENST00000388090 VNN1O95497 513 aa1.66□□□□□ -2.14
SNORA40-201ENST00000388090 CSF1RP07333 972 aa1.66□□□□□ -2.14
SNORA40-201ENST00000388090 GNAI3P08754 354 aa1.66□□□□□ -2.14
SNORA40-201ENST00000388090 PHKG2P15735 406 aa1.66□□□□□ -2.14
SNORA40-201ENST00000388090 MALP21145 153 aa1.66□□□□□ -2.14
SNORA40-201ENST00000388090 AGXTP21549 392 aa1.66□□□□□ -2.14
SNORA40-201ENST00000388090 PHKA1P46020 1223 aa1.66□□□□□ -2.14
SNORA40-201ENST00000388090 PXNP49023 591 aaPredicted RBP1.66□□□□□ -2.14
SNORA40-201ENST00000388090 ART1P52961 327 aa1.66□□□□□ -2.14
SNORA40-201ENST00000388090 LILRA4P59901 499 aa1.66□□□□□ -2.14
SNORA40-201ENST00000388090 KRTAP12-2P59991 146 aa1.66□□□□□ -2.14
SNORA40-201ENST00000388090 GNAI1P63096 354 aa1.66□□□□□ -2.14
SNORA40-201ENST00000388090 TCEA2Q15560 299 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms