RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 OGFRQ9NZT2 677 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 VTI1BQ9UEU0 232 aa-0.1□□□□□ -2.43
RNU6-540P-201ENST00000384622 KIR2DL5BA0A0G2JN68 375 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 KIR2DL5BA0A0G2JPC4 375 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 KLHL33A6NCF5 533 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 E7ENX8 843 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 WNT10BO00744 389 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 CD63P08962 238 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 ACADSP16219 412 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 CLCN2P51788 898 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 FMO1Q01740 532 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 MEF2AQ02078 507 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 TAP2Q03519 686 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 DSC1Q08554 894 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 IFRD2Q12894 506 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 ST3GAL2Q16842 350 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 C4orf46Q504U0 113 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 AWAT1Q58HT5 328 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 C16orf71Q8IYS4 520 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 TRMT2AQ8IZ69 625 aaKnown RBP-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 KIR2DL5AQ8N109 375 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 SLC44A5Q8NCS7 719 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 GRAPLQ8TC17 118 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 SORCS1Q8WY21 1168 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 FAM136AQ96C01 138 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 ZNF501Q96CX3 271 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 CCDC97Q96F63 343 aaPredicted RBP-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 FOXN4Q96NZ1 517 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 OSBPL9Q96SU4 736 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 VGLL1Q99990 258 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 TUBA1CQ9BQE3 449 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 CAPN10Q9HC96 672 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 MRS2Q9HD23 443 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 TXNRD2Q9NNW7 524 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 NYAP2Q9P242 653 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 SLC23A1Q9UHI7 598 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 PTGDR2Q9Y5Y4 395 aa-0.11□□□□□ -2.43
RNU6-540P-201ENST00000384622 FLG2Q5D862 2391 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 P2RY10O00398 339 aa-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 PPM1DO15297 605 aa-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 KRT37O76014 449 aa-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 CYP17A1P05093 508 aa-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 IL2RBP14784 551 aa-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 NAT1P18440 290 aa-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 CTSSP25774 331 aa-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 HOXD3P31249 432 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 GPR15P49685 360 aa-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 CLK1P49759 484 aaKnown RBP-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 YPEL5P62699 121 aa-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 MRPS5P82675 430 aaKnown RBP-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 HSP90AA2PQ14568 343 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 EAPPQ56P03 285 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 CCDC178Q5BJE1 867 aa-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 DALRD3Q5D0E6 543 aaKnown RBP-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 SWSAP1Q6NVH7 229 aa-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 C6orf15Q6UXA7 325 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 NSMFQ6X4W1 530 aa-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 CCDC185Q8N715 623 aa-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 C2orf69Q8N8R5 385 aa-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 FAM76AQ8TAV0 307 aa-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 STON2Q8WXE9 905 aa-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 USP13Q92995 863 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 CD101Q93033 1021 aa-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 ZNF300Q96RE9 604 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 MYOCQ99972 504 aa-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 PIMREGQ9BSJ6 248 aa-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 SERHLQ9NQF3 203 aa-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 ZNF282Q9UDV7 671 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 SH2B3Q9UQQ2 575 aa-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 KCNK7Q9Y2U2 307 aa-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 SLC6A5Q9Y345 797 aa-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 UTP18Q9Y5J1 556 aaKnown RBP eCLIP-0.12□□□□□ -2.43
RNU6-540P-201ENST00000384622 SPATA31A3Q5VYP0 1347 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 NDUFAF8A1L188 74 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 INAFM1C9JVW0 142 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 PRKNO60260 465 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 TMEM127O75204 238 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 SLC22A3O75751 556 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 CRYAAP02489 173 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 FESP07332 822 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 PABPC1P11940 636 aaKnown RBP-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 CEBPBP17676 345 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 ALDH1A3P47895 512 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 KRTAP10-4P60372 401 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 PLCB4Q15147 1175 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 EPHA7Q15375 998 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 KRTAP20-1Q3LI63 56 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 EARS2Q5JPH6 523 aaKnown RBP-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 MTHFD1LQ6UB35 978 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 RANBP10Q6VN20 620 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 Q6ZR54 194 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 Q6ZWC4 215 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 BCDIN3DQ7Z5W3 292 aaKnown RBP-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 CTU1Q7Z7A3 348 aaKnown RBP-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 ZNF547Q8IVP9 402 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 LMNTD2Q8IXW0 634 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 PARP8Q8N3A8 854 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 TMIEQ8NEW7 156 aa-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 ZCCHC13Q8WW36 166 aaKnown RBP-0.13□□□□□ -2.43
RNU6-540P-201ENST00000384622 MSI2Q96DH6 328 aaKnown RBP-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms