RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 PMEPA1Q969W9 287 aa-1.87□□□□□ -2.71
RNU6-1340P-201ENST00000384438 ESAMQ96AP7 390 aa-1.87□□□□□ -2.71
RNU6-1340P-201ENST00000384438 HS6ST2Q96MM7 605 aa-1.87□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PTCHD1Q96NR3 888 aa-1.87□□□□□ -2.71
RNU6-1340P-201ENST00000384438 NEU1Q99519 415 aa-1.87□□□□□ -2.71
RNU6-1340P-201ENST00000384438 MAP3K14Q99558 947 aa-1.87□□□□□ -2.71
RNU6-1340P-201ENST00000384438 HNRNPABQ99729 332 aaKnown RBP-1.87□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PIGQQ9BRB3 760 aa-1.87□□□□□ -2.71
RNU6-1340P-201ENST00000384438 LSM14BQ9BX40 385 aaKnown RBP-1.87□□□□□ -2.71
RNU6-1340P-201ENST00000384438 GALNT9Q9HCQ5 603 aa-1.87□□□□□ -2.71
RNU6-1340P-201ENST00000384438 ZFP57Q9NU63 452 aa-1.87□□□□□ -2.71
RNU6-1340P-201ENST00000384438 BARHL2Q9NY43 387 aa-1.87□□□□□ -2.71
RNU6-1340P-201ENST00000384438 ZNF230Q9UIE0 474 aaPredicted RBP-1.87□□□□□ -2.71
RNU6-1340P-201ENST00000384438 HDAC9Q9UKV0 1011 aa-1.87□□□□□ -2.71
RNU6-1340P-201ENST00000384438 LIMCH1Q9UPQ0 1083 aa-1.87□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PKHD1L1Q86WI1 4243 aa-1.87□□□□□ -2.71
RNU6-1340P-201ENST00000384438 DNAH3Q8TD57 4116 aa-1.87□□□□□ -2.71
RNU6-1340P-201ENST00000384438 RTTNQ86VV8 2226 aa-1.87□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PIEZO2Q9H5I5 2752 aa-1.87□□□□□ -2.71
RNU6-1340P-201ENST00000384438 LAMA3Q16787 3333 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 CR1P17927 2039 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 C1orf226A1L170 272 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PRAMEF27A3QJZ7 478 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 GSAPA4D1B5 854 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 A6NJR5 290 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PMS2P5A8MQ11 134 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 TULP1O00294 542 aaPredicted RBP-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 FGF17O60258 216 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 NDUFB8O95169 186 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 C9P02748 559 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 MELTFP08582 738 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 GSTM1P09488 218 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 IFI30P13284 250 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 GP9P14770 177 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 ARNTP27540 789 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PCYT1AP49585 367 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 TBX4P57082 545 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 B3GALT5-AS1P59052 145 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 RBM3P98179 157 aaKnown RBP-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 B4GALNT1Q00973 533 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PFKPQ01813 784 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 CSTF1Q05048 431 aaKnown RBP-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 NR1H3Q13133 447 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 SPIDRQ14159 915 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 TMEM187Q14656 261 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 SF3B3Q15393 1217 aaKnown RBP-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 E2F4Q16254 413 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 GAGE13Q4V321 117 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 RPS26P11Q5JNZ5 115 aaPredicted RBP-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 SLC10A5Q5PT55 438 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PRR9Q5T870 116 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 ASPHD1Q5U4P2 390 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PLPPR4Q7Z2D5 763 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PPFIBP1Q86W92 1011 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PRR22Q8IZ63 422 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 MYOCDQ8IZQ8 938 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PRSS35Q8N3Z0 413 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 C7orf31Q8N865 590 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 SPANXA2-OT1Q8N9U9 137 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 ANKRD53Q8N9V6 530 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 GLB1L3Q8NCI6 653 aaPredicted RBP-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 SLC17A8Q8NDX2 589 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 ZFP28Q8NHY6 868 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 RNF138Q8WVD3 245 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PSPC1Q8WXF1 523 aaKnown RBP-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PIK3R5Q8WYR1 880 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 BADQ92934 168 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 CD101Q93033 1021 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 OMA1Q96E52 524 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 TMEM87BQ96K49 555 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 LRR1Q96L50 414 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 NPAS1Q99742 590 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 CPPED1Q9BRF8 314 aaPredicted RBP-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 SAP130Q9H0E3 1048 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 FBRSL1Q9HCM7 1045 aaKnown RBP-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 HMX1Q9NP08 348 aaPredicted RBP-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 ACSS2Q9NR19 701 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 KCNQ5Q9NR82 932 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 POLR3EQ9NVU0 708 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 HIF1ANQ9NWT6 349 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PDP2Q9P2J9 529 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 PI4KBQ9UBF8 816 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 GULP1Q9UBP9 304 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 STRIP2Q9ULQ0 834 aa-1.88□□□□□ -2.71
RNU6-1340P-201ENST00000384438 IGLV3-16A0A075B6K0 115 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 IGKV1-6A0A0C4DH72 117 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 A0A0U1RQK1 487 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 TMEM272A0A1B0GTI8 110 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 C2orf78A6NCI8 922 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 GLTPD2A6NH11 291 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 ZNF839A8K0R7 811 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 GLUD1P00367 558 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 RBMY1A1P0DJD3 496 aaKnown RBP-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 RBMY1CP0DJD4 496 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 SRGNP10124 158 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 DGKAP23743 735 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 ALDH7A1P49419 539 aaKnown RBP-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 GLUD2P49448 558 aa-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 ETF1P62495 437 aaKnown RBP-1.89□□□□□ -2.71
RNU6-1340P-201ENST00000384438 CFHR3Q02985 330 aa-1.89□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms