RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 TMEM161BQ8NDZ6 487 aa13.2□□□□□ -0.3
DNMT3A-204ENST00000380756 RNPEPL1Q9HAU8 725 aa13.2□□□□□ -0.3
DNMT3A-204ENST00000380756 KRT82Q9NSB4 513 aa13.2□□□□□ -0.3
DNMT3A-204ENST00000380756 TAGLN3Q9UI15 199 aa13.2□□□□□ -0.3
DNMT3A-204ENST00000380756 AURKCQ9UQB9 309 aa13.2□□□□□ -0.3
DNMT3A-204ENST00000380756 DDX3YO15523 660 aaKnown RBP13.2□□□□□ -0.3
DNMT3A-204ENST00000380756 MYL3P08590 195 aa13.2□□□□□ -0.3
DNMT3A-204ENST00000380756 ITGB5P18084 799 aa13.2□□□□□ -0.3
DNMT3A-204ENST00000380756 RPA3P35244 121 aaPredicted RBP13.2□□□□□ -0.3
DNMT3A-204ENST00000380756 RAP1GAPP47736 663 aa13.2□□□□□ -0.3
DNMT3A-204ENST00000380756 DENND5BQ6ZUT9 1274 aa13.2□□□□□ -0.3
DNMT3A-204ENST00000380756 ACOT1Q86TX2 421 aa13.2□□□□□ -0.3
DNMT3A-204ENST00000380756 TMPRSS6Q8IU80 811 aa13.2□□□□□ -0.3
DNMT3A-204ENST00000380756 CCNJLQ8IV13 435 aa13.2□□□□□ -0.3
DNMT3A-204ENST00000380756 DDIASQ8IXT1 998 aa13.2□□□□□ -0.3
DNMT3A-204ENST00000380756 KIAA1683Q9H0B3 1180 aa13.2□□□□□ -0.3
DNMT3A-204ENST00000380756 ILKAPQ9H0C8 392 aaPredicted RBP13.2□□□□□ -0.3
DNMT3A-204ENST00000380756 KIF9Q9HAQ2 790 aa13.2□□□□□ -0.3
DNMT3A-204ENST00000380756 SAR1AQ9NR31 198 aa13.2□□□□□ -0.3
DNMT3A-204ENST00000380756 STARD13Q9Y3M8 1113 aa13.2□□□□□ -0.3
DNMT3A-204ENST00000380756 BCL9LQ86UU0 1499 aa13.2□□□□□ -0.3
DNMT3A-204ENST00000380756 hCG_2014768A0A024R1R8 64 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 IL10P22301 178 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 YY1P25490 414 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 SATB1Q01826 763 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 MAMLD1Q13495 774 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 FLOT2Q14254 428 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 ATP13A4Q4VNC1 1196 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 SLC45A4Q5BKX6 768 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 ZNF572Q7Z3I7 529 aaPredicted RBP13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 INPP5DQ92835 1189 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 ZBTB18Q99592 522 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 CCDC134Q9H6E4 229 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 EML4Q9HC35 981 aaKnown RBP13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 TTC36A6NLP5 189 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 GMPSP49915 693 aaPredicted RBP13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 NUDT2P50583 147 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 NSUN2Q08J23 767 aaKnown RBP eCLIP13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 TMEM62Q0P6H9 643 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 PALB2Q86YC2 1186 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 PPHLN1Q8NEY8 458 aaKnown RBP13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 PBXIP1Q96AQ6 731 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 TMEM176AQ96HP8 235 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 APOPT1Q96IL0 206 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 SRPK1Q96SB4 655 aaKnown RBP13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 DPP3Q9NY33 737 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 DCDC2Q9UHG0 476 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 LRCH1Q9Y2L9 728 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 TYW5A2RUC4 315 aaKnown RBP13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 SNX2O60749 519 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 CD4P01730 458 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 KRT16P08779 473 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 BTBD8Q5XKL5 378 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 BRSK2Q8IWQ3 736 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 SLC7A14Q8TBB6 771 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 SLCO1B3Q9NPD5 702 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.19□□□□□ -0.31e-6■■■■□ 22.7
DNMT3A-204ENST00000380756 ARMCX1Q9P291 453 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 CDYLQ9Y232 598 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 MTSS1O43312 755 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 DNAJC6O75061 913 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 TGM2P21980 687 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 RPL10AP62906 217 aaKnown RBP13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 FAAP100Q0VG06 881 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 UBXN6Q9BZV1 441 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 ELP3Q9H9T3 547 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 GGA3Q9NZ52 723 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 SAE1Q9UBE0 346 aaPredicted RBP13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 NR2E1Q9Y466 385 aa13.19□□□□□ -0.3
DNMT3A-204ENST00000380756 E2F6O75461 281 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 CXCL8P10145 99 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 ETS1P14921 441 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 EIF4BP23588 611 aaKnown RBP13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 GNL1P36915 607 aaPredicted RBP13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 XRCC4Q13426 336 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 RNF43Q68DV7 783 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 IZUMO2Q6UXV1 221 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 ZBTB10Q96DT7 871 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 HIC2Q96JB3 615 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 PCDHB18PQ96TA0 734 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 MRIQ9BWK5 157 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 SP110Q9HB58 689 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 HACL1Q9UJ83 578 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 UBA6A0AVT1 1052 aaPredicted RBP13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 GH1P01241 217 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 GFAPP14136 432 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 GRK2P25098 689 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 TGFB2P61812 414 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 SLC34A1Q06495 639 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 ZNF268Q14587 947 aaPredicted RBP13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 ZPBP2Q6X784 338 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 PRUNE1Q86TP1 453 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 TBC1D10AQ9BXI6 508 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 C10orf88Q9H8K7 445 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 CYP3A43Q9HB55 503 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 DTNAQ9Y4J8 743 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 PCDHAC2Q9Y5I4 1007 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 NRXN3Q9Y4C0 1643 aa13.18□□□□□ -0.3
DNMT3A-204ENST00000380756 PSMD3O43242 534 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms