RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 JAM2P57087 298 aa18.49■□□□□ 0.55
UBL3-201ENST00000380680 DUPD1Q68J44 220 aa18.49■□□□□ 0.55
UBL3-201ENST00000380680 DENND5BQ6ZUT9 1274 aa18.49■□□□□ 0.55
UBL3-201ENST00000380680 MREGQ8N565 214 aa18.49■□□□□ 0.55
UBL3-201ENST00000380680 MSL3Q8N5Y2 521 aaKnown RBP18.49■□□□□ 0.55
UBL3-201ENST00000380680 PDGFCQ9NRA1 345 aa18.49■□□□□ 0.55
UBL3-201ENST00000380680 RASSF10A6NK89 507 aa18.49■□□□□ 0.55
UBL3-201ENST00000380680 SHBGP04278 402 aa18.49■□□□□ 0.55
UBL3-201ENST00000380680 FSCBQ5H9T9 825 aa18.49■□□□□ 0.55
UBL3-201ENST00000380680 HELQQ8TDG4 1101 aa18.49■□□□□ 0.55
UBL3-201ENST00000380680 FAM96AQ9H5X1 160 aa18.49■□□□□ 0.55
UBL3-201ENST00000380680 WDCPQ9H6R7 721 aa18.49■□□□□ 0.55
UBL3-201ENST00000380680 KIF9Q9HAQ2 790 aa18.49■□□□□ 0.55
UBL3-201ENST00000380680 ARHGAP28Q9P2N2 729 aa18.49■□□□□ 0.55
UBL3-201ENST00000380680 ZNF541Q9H0D2 1346 aa18.48■□□□□ 0.55
UBL3-201ENST00000380680 HMGCRP04035 888 aa18.48■□□□□ 0.55
UBL3-201ENST00000380680 BST2Q10589 180 aaKnown RBP18.48■□□□□ 0.55
UBL3-201ENST00000380680 C1orf146Q5VVC0 180 aa18.48■□□□□ 0.55
UBL3-201ENST00000380680 MTHFD1LQ6UB35 978 aa18.48■□□□□ 0.55
UBL3-201ENST00000380680 SLFN11Q7Z7L1 901 aa18.48■□□□□ 0.55
UBL3-201ENST00000380680 IQCKQ8N0W5 287 aa18.48■□□□□ 0.55
UBL3-201ENST00000380680 MANSC1Q9H8J5 431 aa18.48■□□□□ 0.55
UBL3-201ENST00000380680 CCDC22O60826 627 aa18.48■□□□□ 0.55
UBL3-201ENST00000380680 SKIP12755 728 aa18.48■□□□□ 0.55
UBL3-201ENST00000380680 RBBP5Q15291 538 aaKnown RBP18.48■□□□□ 0.55
UBL3-201ENST00000380680 ASTE1Q2TB18 679 aaPredicted RBP18.48■□□□□ 0.55
UBL3-201ENST00000380680 MDH1BQ5I0G3 518 aa18.48■□□□□ 0.55
UBL3-201ENST00000380680 LRRC57Q8N9N7 239 aa18.48■□□□□ 0.55
UBL3-201ENST00000380680 ERVK-5Q9HDB9 667 aa18.48■□□□□ 0.55
UBL3-201ENST00000380680 ZNF214Q9UL59 606 aaPredicted RBP18.48■□□□□ 0.55
UBL3-201ENST00000380680 THP07101 528 aa18.48■□□□□ 0.55
UBL3-201ENST00000380680 CASP2P42575 452 aa18.48■□□□□ 0.55
UBL3-201ENST00000380680 TTC39BQ5VTQ0 682 aaPredicted RBP18.48■□□□□ 0.55
UBL3-201ENST00000380680 C4orf22Q6V702 233 aa18.48■□□□□ 0.55
UBL3-201ENST00000380680 ACAD11Q709F0 780 aa18.48■□□□□ 0.55
UBL3-201ENST00000380680 PGM2Q96G03 612 aa18.48■□□□□ 0.55
UBL3-201ENST00000380680 LRGUKQ96M69 825 aa18.48■□□□□ 0.55
UBL3-201ENST00000380680 SIX2Q9NPC8 291 aa18.48■□□□□ 0.55
UBL3-201ENST00000380680 EPS15L1Q9UBC2 864 aa18.48■□□□□ 0.55
UBL3-201ENST00000380680 TJP2Q9UDY2 1190 aa18.48■□□□□ 0.55
UBL3-201ENST00000380680 AJAP1Q9UKB5 411 aaPredicted RBP18.48■□□□□ 0.55
UBL3-201ENST00000380680 COG5Q9UP83 839 aa18.48■□□□□ 0.55
UBL3-201ENST00000380680 RPS6KL1Q9Y6S9 549 aa18.48■□□□□ 0.55
UBL3-201ENST00000380680 S100BP04271 92 aaPredicted RBP18.47■□□□□ 0.55
UBL3-201ENST00000380680 MAP3K7CLP57077 242 aa18.47■□□□□ 0.55
UBL3-201ENST00000380680 SKOR1P84550 965 aa18.47■□□□□ 0.55
UBL3-201ENST00000380680 PTK6Q13882 451 aa18.47■□□□□ 0.55
UBL3-201ENST00000380680 ZNF235Q14590 738 aa18.47■□□□□ 0.55
UBL3-201ENST00000380680 ZBTB41Q5SVQ8 909 aa18.47■□□□□ 0.55
UBL3-201ENST00000380680 PLPPR4Q7Z2D5 763 aa18.47■□□□□ 0.55
UBL3-201ENST00000380680 XPNPEP1Q9NQW7 623 aa18.47■□□□□ 0.55
UBL3-201ENST00000380680 PHTF1Q9UMS5 762 aa18.47■□□□□ 0.55
UBL3-201ENST00000380680 PKD1L3Q7Z443 1732 aa18.47■□□□□ 0.55
UBL3-201ENST00000380680 OPLAHO14841 1288 aa18.47■□□□□ 0.55
UBL3-201ENST00000380680 ALDH18A1P54886 795 aaKnown RBP18.47■□□□□ 0.55
UBL3-201ENST00000380680 PRUNE1Q86TP1 453 aa18.47■□□□□ 0.55
UBL3-201ENST00000380680 IPMKQ8NFU5 416 aa18.47■□□□□ 0.55
UBL3-201ENST00000380680 N4BP2L2Q92802 583 aaPredicted RBP18.47■□□□□ 0.55
UBL3-201ENST00000380680 WNK4Q96J92 1243 aa18.47■□□□□ 0.55
UBL3-201ENST00000380680 TTC1Q99614 292 aa18.47■□□□□ 0.55
UBL3-201ENST00000380680 ABI2Q9NYB9 513 aaPredicted RBP18.47■□□□□ 0.55
UBL3-201ENST00000380680 MYH13Q9UKX3 1938 aa18.47■□□□□ 0.55
UBL3-201ENST00000380680 XPAP23025 273 aaPredicted RBP18.47■□□□□ 0.55
UBL3-201ENST00000380680 HASPINQ8TF76 798 aa18.47■□□□□ 0.55
UBL3-201ENST00000380680 C20orf96Q9NUD7 363 aaPredicted RBP18.47■□□□□ 0.55
UBL3-201ENST00000380680 RECQL4O94761 1208 aa18.46■□□□□ 0.55
UBL3-201ENST00000380680 DRG2P55039 364 aaKnown RBP18.46■□□□□ 0.55
UBL3-201ENST00000380680 TAS2R40P59535 323 aa18.46■□□□□ 0.55
UBL3-201ENST00000380680 USP10Q14694 798 aaKnown RBP18.46■□□□□ 0.55
UBL3-201ENST00000380680 PCSK7Q16549 785 aa18.46■□□□□ 0.55
UBL3-201ENST00000380680 USP50Q70EL3 339 aaPredicted RBP18.46■□□□□ 0.55
UBL3-201ENST00000380680 TLK2Q86UE8 772 aa18.46■□□□□ 0.55
UBL3-201ENST00000380680 L3MBTL3Q96JM7 780 aaPredicted RBP18.46■□□□□ 0.55
UBL3-201ENST00000380680 STOML1Q9UBI4 398 aa18.46■□□□□ 0.55
UBL3-201ENST00000380680 MROH7Q68CQ1 1323 aa18.46■□□□□ 0.55
UBL3-201ENST00000380680 MAP3K7O43318 606 aa18.46■□□□□ 0.55
UBL3-201ENST00000380680 ENO1P06733 434 aaKnown RBP18.46■□□□□ 0.55
UBL3-201ENST00000380680 ETS1P14921 441 aa18.46■□□□□ 0.55
UBL3-201ENST00000380680 CYP2F1P24903 491 aa18.46■□□□□ 0.55
UBL3-201ENST00000380680 SPRP35270 261 aaPredicted RBP18.46■□□□□ 0.55
UBL3-201ENST00000380680 ELK3P41970 407 aa18.46■□□□□ 0.55
UBL3-201ENST00000380680 TSTA3Q13630 321 aaPredicted RBP18.46■□□□□ 0.55
UBL3-201ENST00000380680 C15orf59Q2T9L4 293 aaPredicted RBP18.46■□□□□ 0.55
UBL3-201ENST00000380680 ARID3BQ8IVW6 561 aaPredicted RBP18.46■□□□□ 0.55
UBL3-201ENST00000380680 CCDC124Q96CT7 223 aaKnown RBP18.46■□□□□ 0.55
UBL3-201ENST00000380680 LRRC19Q9H756 370 aa18.46■□□□□ 0.55
UBL3-201ENST00000380680 MYH6P13533 1939 aa18.46■□□□□ 0.55
UBL3-201ENST00000380680 CST3P01034 146 aaPredicted RBP18.46■□□□□ 0.55
UBL3-201ENST00000380680 SETSIPP0DME0 302 aa18.46■□□□□ 0.55
UBL3-201ENST00000380680 FLT3P36888 993 aa18.46■□□□□ 0.55
UBL3-201ENST00000380680 PHF13Q86YI8 300 aaPredicted RBP18.46■□□□□ 0.55
UBL3-201ENST00000380680 SLC2A14Q8TDB8 520 aa18.46■□□□□ 0.55
UBL3-201ENST00000380680 E2F7Q96AV8 911 aa18.46■□□□□ 0.55
UBL3-201ENST00000380680 SERPINI1Q99574 410 aa18.46■□□□□ 0.55
UBL3-201ENST00000380680 DDX20Q9UHI6 824 aaKnown RBP18.46■□□□□ 0.55
UBL3-201ENST00000380680 SIGLEC16A6NMB1 481 aa18.46■□□□□ 0.55
UBL3-201ENST00000380680 FSCN2O14926 492 aa18.46■□□□□ 0.55
UBL3-201ENST00000380680 PPFIA2O75334 1257 aa18.46■□□□□ 0.55
UBL3-201ENST00000380680 GRAMD1BQ3KR37 738 aa18.46■□□□□ 0.55
UBL3-201ENST00000380680 RMDN1Q96DB5 314 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms