RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 Q3C1V9 767 aa7.8□□□□□ -1.16
CDKL5-201ENST00000379989 C1orf146Q5VVC0 180 aa7.8□□□□□ -1.16
CDKL5-201ENST00000379989 IYDQ6PHW0 289 aa7.8□□□□□ -1.16
CDKL5-201ENST00000379989 ULK2Q8IYT8 1036 aa7.8□□□□□ -1.16
CDKL5-201ENST00000379989 PPM1KQ8N3J5 372 aa7.8□□□□□ -1.16
CDKL5-201ENST00000379989 TTLL6Q8N841 843 aa7.8□□□□□ -1.16
CDKL5-201ENST00000379989 Q8N9G6 341 aaPredicted RBP7.8□□□□□ -1.16
CDKL5-201ENST00000379989 LILRB1Q8NHL6 650 aaPredicted RBP7.8□□□□□ -1.16
CDKL5-201ENST00000379989 TPCN2Q8NHX9 752 aa7.8□□□□□ -1.16
CDKL5-201ENST00000379989 RFWD2Q8NHY2 731 aa7.8□□□□□ -1.16
CDKL5-201ENST00000379989 ZNF398Q8TD17 642 aa7.8□□□□□ -1.16
CDKL5-201ENST00000379989 FAM151AQ8WW52 585 aa7.8□□□□□ -1.16
CDKL5-201ENST00000379989 P2RX5Q93086 422 aa7.8□□□□□ -1.16
CDKL5-201ENST00000379989 CEP63Q96MT8 703 aa7.8□□□□□ -1.16
CDKL5-201ENST00000379989 FBXO6Q9NRD1 293 aaPredicted RBP7.8□□□□□ -1.16
CDKL5-201ENST00000379989 OLFML3Q9NRN5 406 aa7.8□□□□□ -1.16
CDKL5-201ENST00000379989 PLA2G4CQ9UP65 541 aa7.8□□□□□ -1.16
CDKL5-201ENST00000379989 LINC00854A0A1B0GVQ3 168 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 CLOCKO15516 846 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 DNAJA2O60884 412 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 SIN3BO75182 1162 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 INHBBP09529 407 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 NR4A1P22736 598 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 CCNE1P24864 410 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 CIITAP33076 1130 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 CREB5Q02930 508 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 CYP4A22Q5TCH4 519 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 C6orf163Q5TEZ5 329 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 DCAF12L1Q5VU92 463 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 CYP4V2Q6ZWL3 525 aaPredicted RBP7.79□□□□□ -1.16
CDKL5-201ENST00000379989 TRMT10CQ7L0Y3 403 aaKnown RBP7.79□□□□□ -1.16
CDKL5-201ENST00000379989 HEATR3Q7Z4Q2 680 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 AMIGO2Q86SJ2 522 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 CCDC84Q86UT8 332 aaPredicted RBP7.79□□□□□ -1.16
CDKL5-201ENST00000379989 CERS5Q8N5B7 392 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 SHKBP1Q8TBC3 707 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 TAMM41Q96BW9 452 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 DYNLL2Q96FJ2 89 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 MARCH7Q9H992 704 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 IGSF9Q9P2J2 1179 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 RABGEF1Q9UJ41 708 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 A0A1B0GTW7 788 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 WDR91A4D1P6 747 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 CAPN8A6NHC0 703 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 ANKRD63C9JTQ0 380 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 TM7SF2O76062 418 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 P4HA1P13674 534 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 TNNI2P48788 182 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 PPP2R5EQ16537 467 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 MAPK6Q16659 721 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 FAM182BQ5T319 152 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 AAGABQ6PD74 315 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 CYP2U1Q7Z449 544 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 SLFN11Q7Z7L1 901 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 TTC7BQ86TV6 843 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 NT5DC3Q86UY8 548 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 CADM3Q8N126 398 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 ICA1LQ8NDH6 482 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 DENND1AQ8TEH3 1009 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 EDEM3Q9BZQ6 932 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 DDX56Q9NY93 547 aaKnown RBP7.79□□□□□ -1.16
CDKL5-201ENST00000379989 AGO2Q9UKV8 859 aaKnown RBP7.79□□□□□ -1.16
CDKL5-201ENST00000379989 TMX2-CTNND1H3BSU7 103 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 HAT1O14929 419 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 B3GALNT1O75752 331 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 CYP3A4P08684 503 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 PDE4DQ08499 809 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 RSBN1LQ6PCB5 846 aaPredicted RBP7.79□□□□□ -1.16
CDKL5-201ENST00000379989 C18orf8Q96DM3 657 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 MTBPQ96DY7 904 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 SNF8Q96H20 258 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 FAM20AQ96MK3 541 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 MTMR9Q96QG7 549 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 OSBPL8Q9BZF1 889 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 KLHL25Q9H0H3 589 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 FANCEQ9HB96 536 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 AAASQ9NRG9 546 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 LGALS13Q9UHV8 139 aa7.79□□□□□ -1.16
CDKL5-201ENST00000379989 ZMYM2Q9UBW7 1377 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 WTIPA6NIX2 430 aaPredicted RBP7.78□□□□□ -1.16
CDKL5-201ENST00000379989 B2RBV5 119 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 H3BRJ5 948 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 RGS13O14921 159 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 CYP26A1O43174 497 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 KCNJ13O60928 360 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 CSPG5O95196 566 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 CXCR2P25025 360 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 CHKAP35790 457 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 KRT76Q01546 638 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 GHRHRQ02643 423 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 TNFAIP1Q13829 316 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 TRIP10Q15642 601 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 ZNF174Q15697 407 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 RGS21Q2M5E4 152 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 TJAP1Q5JTD0 557 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 CCDC62Q6P9F0 684 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 TMPRSS6Q8IU80 811 aa7.78□□□□□ -1.16
CDKL5-201ENST00000379989 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.78□□□□□ -1.16
CDKL5-201ENST00000379989 RBM15BQ8NDT2 890 aaKnown RBP7.78□□□□□ -1.16
CDKL5-201ENST00000379989 SCFD1Q8WVM8 642 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms