RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 ARSAP15289 507 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 CTHP32929 405 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 MAGEA9P43362 315 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 PPP3CCP48454 512 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 INCA1Q0VD86 236 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 ZNF268Q14587 947 aaPredicted RBP12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 PON2Q15165 354 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 ITPRIPL2Q3MIP1 535 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 PAQR9Q6ZVX9 377 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 FRMD5Q7Z6J6 570 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 FILIP1Q7Z7B0 1213 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 CRYBG2Q8N1P7 616 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 SCAMP5Q8TAC9 235 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 RIN3Q8TB24 985 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 SH3RF2Q8TEC5 729 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 TATDN2Q93075 761 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 CYFIP2Q96F07 1278 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 MSANTD3Q96H12 275 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 HEXIM2Q96MH2 286 aaKnown RBP12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 SMOQ99835 787 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 ARID3AQ99856 593 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 DUSP9Q99956 384 aaKnown RBP12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 LMAN1LQ9HAT1 526 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 CISHQ9NSE2 258 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 DUS2Q9NX74 493 aaKnown RBP12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 GMIPQ9P107 970 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 WNT6Q9Y6F9 365 aa12.26□□□□□ -0.45
SMARCE1-203ENST00000377808 DMDP11532 3685 aa12.25□□□□□ -0.45
SMARCE1-203ENST00000377808 MYO15AQ9UKN7 3530 aa12.25□□□□□ -0.45
SMARCE1-203ENST00000377808 DENND4CQ5VZ89 1909 aa12.25□□□□□ -0.45
SMARCE1-203ENST00000377808 BEST1O76090 585 aa12.25□□□□□ -0.45
SMARCE1-203ENST00000377808 CSTF1Q05048 431 aaKnown RBP12.25□□□□□ -0.45
SMARCE1-203ENST00000377808 CETN1Q12798 172 aa12.25□□□□□ -0.45
SMARCE1-203ENST00000377808 USP4Q13107 963 aa12.25□□□□□ -0.45
SMARCE1-203ENST00000377808 RUNX3Q13761 415 aa12.25□□□□□ -0.45
SMARCE1-203ENST00000377808 LRRC32Q14392 662 aa12.25□□□□□ -0.45
SMARCE1-203ENST00000377808 ZNF77Q15935 545 aa12.25□□□□□ -0.45
SMARCE1-203ENST00000377808 TTI2Q6NXR4 508 aa12.25□□□□□ -0.45
SMARCE1-203ENST00000377808 C1orf228Q6PIY5 440 aa12.25□□□□□ -0.45
SMARCE1-203ENST00000377808 TXNDC11Q6PKC3 985 aa12.25□□□□□ -0.45
SMARCE1-203ENST00000377808 RALGPS2Q86X27 583 aaPredicted RBP12.25□□□□□ -0.45
SMARCE1-203ENST00000377808 TRIML1Q8N9V2 468 aa12.25□□□□□ -0.45
SMARCE1-203ENST00000377808 PDZD8Q8NEN9 1154 aa12.25□□□□□ -0.45
SMARCE1-203ENST00000377808 SLC35C1Q96A29 364 aa12.25□□□□□ -0.45
SMARCE1-203ENST00000377808 RBM12Q9NTZ6 932 aaKnown RBP12.25□□□□□ -0.45
SMARCE1-203ENST00000377808 GCNT4Q9P109 453 aa12.25□□□□□ -0.45
SMARCE1-203ENST00000377808 KIAA1468Q9P260 1216 aa12.25□□□□□ -0.45
SMARCE1-203ENST00000377808 CHORDC1Q9UHD1 332 aaPredicted RBP12.25□□□□□ -0.45
SMARCE1-203ENST00000377808 ARHGAP26Q9UNA1 814 aa12.25□□□□□ -0.45
SMARCE1-203ENST00000377808 CPQQ9Y646 472 aa12.25□□□□□ -0.45
SMARCE1-203ENST00000377808 COL4A2P08572 1712 aa12.25□□□□□ -0.45
SMARCE1-203ENST00000377808 GREB1Q4ZG55 1949 aa12.24□□□□□ -0.45
SMARCE1-203ENST00000377808 SHISA7A6NL88 538 aa12.24□□□□□ -0.45
SMARCE1-203ENST00000377808 LEFTY2O00292 366 aa12.24□□□□□ -0.45
SMARCE1-203ENST00000377808 SCAMP3O14828 347 aaKnown RBP12.24□□□□□ -0.45
SMARCE1-203ENST00000377808 FGFR1OPO95684 399 aaKnown RBP12.24□□□□□ -0.45
SMARCE1-203ENST00000377808 FMO5P49326 533 aa12.24□□□□□ -0.45
SMARCE1-203ENST00000377808 YWHAEP62258 255 aaKnown RBP12.24□□□□□ -0.45
SMARCE1-203ENST00000377808 CUL2Q13617 745 aa12.24□□□□□ -0.45
SMARCE1-203ENST00000377808 PDGFRLQ15198 375 aa12.24□□□□□ -0.45
SMARCE1-203ENST00000377808 PPP1R26Q5T8A7 1209 aaPredicted RBP12.24□□□□□ -0.45
SMARCE1-203ENST00000377808 CLEC20AQ6ZU45 233 aa12.24□□□□□ -0.45
SMARCE1-203ENST00000377808 CPA6Q8N4T0 437 aa12.24□□□□□ -0.45
SMARCE1-203ENST00000377808 TTC39CQ8N584 583 aa12.24□□□□□ -0.45
SMARCE1-203ENST00000377808 ZMIZ2Q8NF64 920 aa12.24□□□□□ -0.45
SMARCE1-203ENST00000377808 WHAMMQ8TF30 809 aa12.24□□□□□ -0.45
SMARCE1-203ENST00000377808 OSCP1Q8WVF1 389 aa12.24□□□□□ -0.45
SMARCE1-203ENST00000377808 TMEM176AQ96HP8 235 aa12.24□□□□□ -0.45
SMARCE1-203ENST00000377808 HNRNPABQ99729 332 aaKnown RBP12.24□□□□□ -0.45
SMARCE1-203ENST00000377808 FAM83CQ9BQN1 747 aa12.24□□□□□ -0.45
SMARCE1-203ENST00000377808 SRRTQ9BXP5 876 aaKnown RBP12.24□□□□□ -0.45
SMARCE1-203ENST00000377808 FBXO44Q9H4M3 255 aa12.24□□□□□ -0.45
SMARCE1-203ENST00000377808 HPS4Q9NQG7 708 aa12.24□□□□□ -0.45
SMARCE1-203ENST00000377808 R4GN57 208 aa12.24□□□□□ -0.45
SMARCE1-203ENST00000377808 MYH10P35580 1976 aa12.24□□□□□ -0.45
SMARCE1-203ENST00000377808 TNFRSF10BO14763 440 aa12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 GFRA3O60609 400 aa12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 GNA14O95837 355 aa12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 OAS1P00973 400 aaKnown RBP12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 SP9P0CG40 484 aa12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 CCDC192P0DO97 292 aa12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 CD19P15391 556 aa12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 PFKLP17858 780 aa12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 ACO1P21399 889 aaKnown RBP12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 RPS9P46781 194 aaKnown RBP12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 AMPD2Q01433 879 aa12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 MTAPQ13126 283 aa12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 TPD52L1Q16890 204 aaPredicted RBP12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 HECTD3Q5T447 861 aa12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 ZC3H14Q6PJT7 736 aaKnown RBP12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 TSSK4Q6SA08 328 aa12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 GPRIN1Q7Z2K8 1008 aa12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 PPM1KQ8N3J5 372 aa12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 OVCA2Q8WZ82 227 aa12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 ATP2A3Q93084 1043 aa12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 CLDN23Q96B33 292 aa12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 NT5C1BQ96P26 610 aa12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 RNF38Q9H0F5 515 aa12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 CLSTN2Q9H4D0 955 aa12.23□□□□□ -0.45
SMARCE1-203ENST00000377808 ECT2Q9H8V3 914 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms