RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 MTA1Q13330 715 aa18.56■□□□□ 0.56
CLSTN1-202ENST00000377298 AP1ARQ63HQ0 302 aa18.56■□□□□ 0.56
CLSTN1-202ENST00000377298 KCNK18Q7Z418 384 aa18.56■□□□□ 0.56
CLSTN1-202ENST00000377298 SERPINB4P48594 390 aa18.56■□□□□ 0.56
CLSTN1-202ENST00000377298 GEMIN4P57678 1058 aaKnown RBP18.56■□□□□ 0.56
CLSTN1-202ENST00000377298 SPOCD1Q6ZMY3 1216 aa18.56■□□□□ 0.56
CLSTN1-202ENST00000377298 TRPM4Q8TD43 1214 aa18.56■□□□□ 0.56
CLSTN1-202ENST00000377298 DUSP10Q9Y6W6 482 aa18.56■□□□□ 0.56
CLSTN1-202ENST00000377298 C2orf81A6NN90 581 aa18.56■□□□□ 0.56
CLSTN1-202ENST00000377298 OXCT1P55809 520 aa18.56■□□□□ 0.56
CLSTN1-202ENST00000377298 OTUD4Q01804 1114 aaKnown RBP18.56■□□□□ 0.56
CLSTN1-202ENST00000377298 PAPD7Q5XG87 772 aaKnown RBP18.56■□□□□ 0.56
CLSTN1-202ENST00000377298 SH3RF1Q7Z6J0 888 aa18.56■□□□□ 0.56
CLSTN1-202ENST00000377298 MCOLN2Q8IZK6 566 aa18.56■□□□□ 0.56
CLSTN1-202ENST00000377298 TLR8Q9NR97 1041 aaKnown RBP18.56■□□□□ 0.56
CLSTN1-202ENST00000377298 SCOCQ9UIL1 159 aa18.56■□□□□ 0.56
CLSTN1-202ENST00000377298 CRLS1Q9UJA2 301 aa18.56■□□□□ 0.56
CLSTN1-202ENST00000377298 HNRNPCL1O60812 293 aaKnown RBP18.56■□□□□ 0.56
CLSTN1-202ENST00000377298 MTBPQ96DY7 904 aa18.56■□□□□ 0.56
CLSTN1-202ENST00000377298 STOML1Q9UBI4 398 aa18.56■□□□□ 0.56
CLSTN1-202ENST00000377298 FGRP09769 529 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 ARL4DP49703 201 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 TBCBQ99426 244 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 LACRTQ9GZZ8 138 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 TMEM39AQ9NV64 488 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 NOP53Q9NZM5 478 aaKnown RBP18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 UMODL1Q5DID0 1318 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 SMIM22K7EJ46 135 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 MRNIPQ6NTE8 343 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 LCA5Q86VQ0 697 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 HAS1Q92839 578 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 L2HGDHQ9H9P8 463 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 MROH7Q68CQ1 1323 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 ZBTB39O15060 712 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 NCAM2O15394 837 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 SH2D3CQ8N5H7 860 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 OSGEPQ9NPF4 335 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 GPATCH2LQ9NWQ4 482 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 CD274Q9NZQ7 290 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 MYOM1P52179 1685 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 FBXW4P57775 412 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 SLC29A2Q14542 456 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 RGMBQ6NW40 437 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 ANKS3Q6ZW76 656 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 EMC1Q8N766 993 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 OR2W6PQ8NHA6 318 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 NRBF2Q96F24 287 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 FAM161BQ96MY7 647 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 BCL9LQ86UU0 1499 aa18.55■□□□□ 0.56
CLSTN1-202ENST00000377298 CFAP73A6NFT4 308 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 PPFIA2O75334 1257 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 CHRM3P20309 590 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 TGM2P21980 687 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 CHADLQ6NUI6 762 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 HERC6Q8IVU3 1022 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 LRRIQ3A6PVS8 624 aaPredicted RBP18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 PCBP1Q15365 356 aaKnown RBP eCLIP18.54■□□□□ 0.561e-6■■■■■ 43.1
CLSTN1-202ENST00000377298 UNC45BQ8IWX7 931 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 ATG4AQ8WYN0 398 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 KLRG1Q96E93 195 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 SMARCD1Q96GM5 515 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 SERPINB12Q96P63 405 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 EPN3Q9H201 632 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 WHRNQ9P202 907 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 AVPR1AP37288 418 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 MAP2K5Q13163 448 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 CCNG2Q16589 344 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 UGT3A1Q6NUS8 523 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 DENND5BQ6ZUT9 1274 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 ZIM3Q96PE6 472 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 UBXN6Q9BZV1 441 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 RPS6KL1Q9Y6S9 549 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 FAM237AA0A1B0GTK4 181 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 ANGPT2O15123 496 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 RHOBTB1O94844 696 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 SFSWAPQ12872 951 aaKnown RBP18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 TTLL9Q3SXZ7 439 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 AARS2Q5JTZ9 985 aaKnown RBP18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 ZBTB41Q5SVQ8 909 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 PLPPR4Q7Z2D5 763 aa18.54■□□□□ 0.56
CLSTN1-202ENST00000377298 CNTNAP2Q9UHC6 1331 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 CARNS1A5YM72 827 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 SDR42E2A6NKP2 422 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 CCR1P32246 355 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 BEX3Q00994 111 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 FAXCQ5TGI0 409 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 LRRC6Q86X45 466 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 ARHGEF19Q8IW93 802 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 HNRNPLLQ8WVV9 542 aaKnown RBP18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 BHMTQ93088 406 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 TEX12Q9BXU0 123 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 TRIM4Q9C037 500 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 ECT2Q9H8V3 914 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 CYP4F11Q9HBI6 524 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 TMEM51Q9NW97 253 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 SLC39A10Q9ULF5 831 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 TIMM13Q9Y5L4 95 aaPredicted RBP18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 SUPT3HB4E1H0 165 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 SUPT3HO75486 399 aa18.53■□□□□ 0.56
CLSTN1-202ENST00000377298 FOXD4Q12950 439 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms