RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 TPCN2Q8NHX9 752 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 TMEM174Q8WUU8 243 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 CCDC127Q96BQ5 260 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 PACSIN1Q9BY11 444 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 SLITRK6Q9H5Y7 841 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 SFXN1Q9H9B4 322 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 DMAC2Q9NW81 257 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 SMARCAL1Q9NZC9 954 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 EHD2Q9NZN4 543 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 GCNT4Q9P109 453 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 TTC7AQ9ULT0 858 aaPredicted RBP13.1□□□□□ -0.31
VRK3-202ENST00000377011 AGAP1Q9UPQ3 857 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 SSX2IPQ9Y2D8 614 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 DERAQ9Y315 318 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 MYH10P35580 1976 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 TECTAO75443 2155 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 NCANO14594 1321 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 ATXN2Q99700 1313 aaKnown RBP13.1□□□□□ -0.31
VRK3-202ENST00000377011 A0A087WUV0 522 aaPredicted RBP13.1□□□□□ -0.31
VRK3-202ENST00000377011 FAM86C2PA6NEL3 165 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 SYN3O14994 580 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 CCL16O15467 120 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 CPP00450 1065 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 C8AP07357 584 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 ARID5AQ03989 594 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 CYP24A1Q07973 514 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 DSTYKQ6XUX3 929 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 KDM7AQ6ZMT4 941 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 ANKS3Q6ZW76 656 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 SPATS2Q86XZ4 545 aaKnown RBP13.1□□□□□ -0.31
VRK3-202ENST00000377011 RNF135Q8IUD6 432 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 SLC7A14Q8TBB6 771 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 PGLYRP2Q96PD5 576 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 ZIM3Q96PE6 472 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 KRT12Q99456 494 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 DZANK1Q9NVP4 752 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 NME7Q9Y5B8 376 aa13.1□□□□□ -0.31
VRK3-202ENST00000377011 ZNF233A6NK53 670 aa13.09□□□□□ -0.31
VRK3-202ENST00000377011 HMGB1P1B2RPK0 211 aaPredicted RBP13.09□□□□□ -0.31
VRK3-202ENST00000377011 KCNK3O14649 394 aa13.09□□□□□ -0.31
VRK3-202ENST00000377011 TRIM66O15016 1216 aa13.09□□□□□ -0.31
VRK3-202ENST00000377011 TRAPPC3O43617 180 aa13.09□□□□□ -0.31
VRK3-202ENST00000377011 SOAT2O75908 522 aa13.09□□□□□ -0.31
VRK3-202ENST00000377011 ABLIM3O94929 683 aa13.09□□□□□ -0.31
VRK3-202ENST00000377011 IL18RAPO95256 599 aa13.09□□□□□ -0.31
VRK3-202ENST00000377011 LDHAP00338 332 aaKnown RBP13.09□□□□□ -0.31
VRK3-202ENST00000377011 SRGAP2BP0DMP2 458 aa13.09□□□□□ -0.31
VRK3-202ENST00000377011 DLATP10515 647 aaKnown RBP13.09□□□□□ -0.31
VRK3-202ENST00000377011 CARSP49589 748 aaKnown RBP13.09□□□□□ -0.31
VRK3-202ENST00000377011 DCAF17Q5H9S7 520 aaPredicted RBP13.09□□□□□ -0.31
VRK3-202ENST00000377011 C1orf220Q5T0J3 134 aa13.09□□□□□ -0.31
VRK3-202ENST00000377011 WSCD1Q658N2 575 aa13.09□□□□□ -0.31
VRK3-202ENST00000377011 HS2ST1Q7LGA3 356 aa13.09□□□□□ -0.31
VRK3-202ENST00000377011 LRRTM3Q86VH5 581 aa13.09□□□□□ -0.31
VRK3-202ENST00000377011 OSTM1Q86WC4 334 aa13.09□□□□□ -0.31
VRK3-202ENST00000377011 SLC9A9Q8IVB4 645 aa13.09□□□□□ -0.31
VRK3-202ENST00000377011 FAM186BQ8IYM0 893 aa13.09□□□□□ -0.31
VRK3-202ENST00000377011 XXYLT1Q8NBI6 393 aa13.09□□□□□ -0.31
VRK3-202ENST00000377011 CASKIN2Q8WXE0 1202 aa13.09□□□□□ -0.31
VRK3-202ENST00000377011 LRRC45Q96CN5 670 aa13.09□□□□□ -0.31
VRK3-202ENST00000377011 STK33Q9BYT3 514 aa13.09□□□□□ -0.31
VRK3-202ENST00000377011 PRKAG3Q9UGI9 489 aa13.09□□□□□ -0.31
VRK3-202ENST00000377011 NFU1Q9UMS0 254 aa13.09□□□□□ -0.31
VRK3-202ENST00000377011 CYB561D2O14569 222 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 RAD51CO43502 376 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 LRRN2O75325 713 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 OAZ2O95190 189 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 ASGR2P07307 311 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 TMEM253P0C7T8 217 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 SOX5P35711 763 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 MTMR3Q13615 1198 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 TTMPQ5BVD1 217 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 SPDYCQ5MJ68 293 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 TCERG1LQ5VWI1 586 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 CES5AQ6NT32 575 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 GRASPQ7Z6J2 395 aaPredicted RBP13.08□□□□□ -0.32
VRK3-202ENST00000377011 C12orf56Q8IXR9 622 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 SLC30A5Q8TAD4 765 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 SMG7Q92540 1137 aaKnown RBP13.08□□□□□ -0.32
VRK3-202ENST00000377011 MFSD14AQ96MC6 490 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 MYADMQ96S97 322 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 PRKD2Q9BZL6 878 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 TMLHEQ9NVH6 421 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 EBAG9O00559 213 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 EXOC3O60645 756 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 PAPLNO95428 1278 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 KRT19P08727 400 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 NOP2P46087 812 aaKnown RBP13.08□□□□□ -0.32
VRK3-202ENST00000377011 TAF6P49848 677 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 POU5F1Q01860 360 aaKnown RBP13.08□□□□□ -0.32
VRK3-202ENST00000377011 YWHAHQ04917 246 aaPredicted RBP13.08□□□□□ -0.32
VRK3-202ENST00000377011 ADCY1Q08828 1119 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 PSMD6Q15008 389 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 TCEAL1Q15170 157 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 TTC31Q49AM3 519 aaPredicted RBP13.08□□□□□ -0.32
VRK3-202ENST00000377011 ATAT1Q5SQI0 421 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 FOXR1Q6PIV2 292 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 PEX26Q7Z412 305 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 ATAD1Q8NBU5 361 aa13.08□□□□□ -0.32
VRK3-202ENST00000377011 STKLD1Q8NE28 680 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms