RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 EDF1O60869 148 aaKnown RBP10.05□□□□□ -0.8
TRIM39-202ENST00000376659 ATP6V1G2O95670 118 aa10.05□□□□□ -0.8
TRIM39-202ENST00000376659 INSRRP14616 1297 aa10.05□□□□□ -0.8
TRIM39-202ENST00000376659 TFE3P19532 575 aaPredicted RBP10.05□□□□□ -0.8
TRIM39-202ENST00000376659 HOXC8P31273 242 aa10.05□□□□□ -0.8
TRIM39-202ENST00000376659 YARSP54577 528 aaKnown RBP10.05□□□□□ -0.8
TRIM39-202ENST00000376659 HSF5Q4G112 596 aaPredicted RBP10.05□□□□□ -0.8
TRIM39-202ENST00000376659 ARCQ7LC44 396 aa10.05□□□□□ -0.8
TRIM39-202ENST00000376659 TMEM110Q86TL2 294 aa10.05□□□□□ -0.8
TRIM39-202ENST00000376659 SRRM1Q8IYB3 904 aaKnown RBP10.05□□□□□ -0.8
TRIM39-202ENST00000376659 SLC35F5Q8WV83 523 aa10.05□□□□□ -0.8
TRIM39-202ENST00000376659 HAUS1Q96CS2 278 aa10.05□□□□□ -0.8
TRIM39-202ENST00000376659 USP18Q9UMW8 372 aa10.05□□□□□ -0.8
TRIM39-202ENST00000376659 CHKBQ9Y259 395 aa10.05□□□□□ -0.8
TRIM39-202ENST00000376659 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.05□□□□□ -0.8
TRIM39-202ENST00000376659 A0A087WZ62 844 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 HMX2A2RU54 273 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 ATF7P17544 494 aaPredicted RBP10.04□□□□□ -0.8
TRIM39-202ENST00000376659 PSMA2P25787 234 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 GRM5P41594 1212 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 SSR1P43307 286 aaKnown RBP10.04□□□□□ -0.8
TRIM39-202ENST00000376659 KCNJ2P63252 427 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 SLC18A2Q05940 514 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 MYO1EQ12965 1108 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 NR1H3Q13133 447 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 TFDP1Q14186 410 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 PREPLQ4J6C6 727 aaPredicted RBP10.04□□□□□ -0.8
TRIM39-202ENST00000376659 ZNF365Q70YC5 407 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 CAND1Q86VP6 1230 aaKnown RBP10.04□□□□□ -0.8
TRIM39-202ENST00000376659 PARP9Q8IXQ6 854 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 ANKRD13AQ8IZ07 590 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 TEKT4Q8WW24 435 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 ZNF668Q96K58 619 aaPredicted RBP10.04□□□□□ -0.8
TRIM39-202ENST00000376659 CFAP57Q96MR6 1250 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 FDXACB1Q9BRP7 624 aaPredicted RBP10.04□□□□□ -0.8
TRIM39-202ENST00000376659 KCNK13Q9HB14 408 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 POPDC2Q9HBU9 364 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 MLXIPLQ9NP71 852 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 ERAP1Q9NZ08 941 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 BARX2Q9UMQ3 279 aaPredicted RBP10.04□□□□□ -0.8
TRIM39-202ENST00000376659 SLC45A1Q9Y2W3 748 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 MED7O43513 233 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 CST8O60676 142 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 KRT7P08729 469 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 VDRP11473 427 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 NLRP4Q96MN2 994 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 GORASP1Q9BQQ3 440 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 DERAQ9Y315 318 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 SCN10AQ9Y5Y9 1956 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 TANC1Q9C0D5 1861 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 LRRD1A4D1F6 860 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 CSDE1O75534 798 aaKnown RBP10.04□□□□□ -0.8
TRIM39-202ENST00000376659 CCNFP41002 786 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 HDAC4P56524 1084 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 PSMC1P62191 440 aaKnown RBP10.04□□□□□ -0.8
TRIM39-202ENST00000376659 R3HDM1Q15032 1099 aaKnown RBP10.04□□□□□ -0.8
TRIM39-202ENST00000376659 CA9Q16790 459 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 CCDC91Q7Z6B0 441 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 GDAP1Q8TB36 358 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 TLE6Q9H808 572 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 MKS1Q9NXB0 559 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 PSMC3IPQ9P2W1 217 aaPredicted RBP10.04□□□□□ -0.8
TRIM39-202ENST00000376659 MORF4L1Q9UBU8 362 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 TBK1Q9UHD2 729 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 MCM8Q9UJA3 840 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 ARL2BPQ9Y2Y0 163 aa10.04□□□□□ -0.8
TRIM39-202ENST00000376659 TDRD15B5MCY1 1934 aaKnown RBP10.04□□□□□ -0.8
TRIM39-202ENST00000376659 E5RJQ4 531 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 TRAFD1O14545 582 aaPredicted RBP10.03□□□□□ -0.8
TRIM39-202ENST00000376659 GSRP00390 522 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 TNNC2P02585 160 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 ZNF286BP0CG31 522 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 TXNP10599 105 aaKnown RBP10.03□□□□□ -0.8
TRIM39-202ENST00000376659 POLR2BP30876 1174 aaKnown RBP10.03□□□□□ -0.8
TRIM39-202ENST00000376659 GJC1P36383 396 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 NDST1P52848 882 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 GEMIN4P57678 1058 aaKnown RBP10.03□□□□□ -0.8
TRIM39-202ENST00000376659 TMED2Q15363 201 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 RNF187Q5TA31 235 aaPredicted RBP10.03□□□□□ -0.8
TRIM39-202ENST00000376659 PMF1Q6P1K2 205 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 CEP128Q6ZU80 1094 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 NT5DC4Q86YG4 428 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 PTPRN2Q92932 1015 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 SLC7A6OSQ96CW6 309 aaPredicted RBP10.03□□□□□ -0.8
TRIM39-202ENST00000376659 OLFM3Q96PB7 478 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 MRPL45Q9BRJ2 306 aaKnown RBP10.03□□□□□ -0.8
TRIM39-202ENST00000376659 EBF2Q9HAK2 575 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 SMYD2Q9NRG4 433 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 MBLAC1A4D2B0 266 aaPredicted RBP10.03□□□□□ -0.8
TRIM39-202ENST00000376659 MDM4O15151 490 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 OSTNP61366 133 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 YWHAZP63104 245 aaKnown RBP10.03□□□□□ -0.8
TRIM39-202ENST00000376659 SLC10A2Q12908 348 aaPredicted RBP10.03□□□□□ -0.8
TRIM39-202ENST00000376659 C15orf59Q2T9L4 293 aaPredicted RBP10.03□□□□□ -0.8
TRIM39-202ENST00000376659 PCGF5Q86SE9 256 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 ZBED8Q8IZ13 594 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 PCDH19Q8TAB3 1148 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 MGARPQ8TDB4 240 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 ZWILCHQ9H900 591 aa10.03□□□□□ -0.8
TRIM39-202ENST00000376659 RPF1Q9H9Y2 349 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms