RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 OR56A3Q8NH54 315 aa2.75□□□□□ -1.97
VPS13A-206ENST00000376646 DAZAP1Q96EP5 407 aaKnown RBP2.75□□□□□ -1.97
VPS13A-206ENST00000376646 MOGAT1Q96PD6 335 aa2.75□□□□□ -1.97
VPS13A-206ENST00000376646 THAP7Q9BT49 309 aaPredicted RBP2.75□□□□□ -1.97
VPS13A-206ENST00000376646 CPNE7Q9UBL6 633 aa2.75□□□□□ -1.97
VPS13A-206ENST00000376646 GABRQQ9UN88 632 aa2.75□□□□□ -1.97
VPS13A-206ENST00000376646 TCRBV5S1A1TA0A578 114 aa2.75□□□□□ -1.97
VPS13A-206ENST00000376646 CYP2A6P11509 494 aaPredicted RBP2.75□□□□□ -1.97
VPS13A-206ENST00000376646 HSPA6P17066 643 aa2.75□□□□□ -1.97
VPS13A-206ENST00000376646 LRPAP1P30533 357 aa2.75□□□□□ -1.97
VPS13A-206ENST00000376646 RABEP1Q15276 862 aa2.75□□□□□ -1.97
VPS13A-206ENST00000376646 SERPINA13PQ6UXR4 307 aa2.75□□□□□ -1.97
VPS13A-206ENST00000376646 OR6B3Q8NGW1 331 aa2.75□□□□□ -1.97
VPS13A-206ENST00000376646 IL31RAQ8NI17 732 aa2.75□□□□□ -1.97
VPS13A-206ENST00000376646 DNAJB14Q8TBM8 379 aa2.75□□□□□ -1.97
VPS13A-206ENST00000376646 ZBTB45Q96K62 511 aaPredicted RBP2.75□□□□□ -1.97
VPS13A-206ENST00000376646 CDH19Q9H159 772 aa2.75□□□□□ -1.97
VPS13A-206ENST00000376646 ASIC5Q9NY37 505 aa2.75□□□□□ -1.97
VPS13A-206ENST00000376646 ELOVL5Q9NYP7 299 aa2.75□□□□□ -1.97
VPS13A-206ENST00000376646 PNMA8BQ9ULN7 279 aaPredicted RBP2.75□□□□□ -1.97
VPS13A-206ENST00000376646 EID1Q9Y6B2 187 aa2.75□□□□□ -1.97
VPS13A-206ENST00000376646 A6NNZ2 444 aa2.74□□□□□ -1.97
VPS13A-206ENST00000376646 H7C4K7 107 aa2.74□□□□□ -1.97
VPS13A-206ENST00000376646 MYO1FO00160 1098 aa2.74□□□□□ -1.97
VPS13A-206ENST00000376646 ADAM10O14672 748 aa2.74□□□□□ -1.97
VPS13A-206ENST00000376646 SLC7A1P30825 629 aa2.74□□□□□ -1.97
VPS13A-206ENST00000376646 MIS18BP1Q6P0N0 1132 aa2.74□□□□□ -1.97
VPS13A-206ENST00000376646 BCDIN3DQ7Z5W3 292 aaKnown RBP2.74□□□□□ -1.97
VPS13A-206ENST00000376646 GAS2L3Q86XJ1 694 aa2.74□□□□□ -1.97
VPS13A-206ENST00000376646 FMNL3Q8IVF7 1028 aa2.74□□□□□ -1.97
VPS13A-206ENST00000376646 GALNT16Q8N428 558 aa2.74□□□□□ -1.97
VPS13A-206ENST00000376646 C9orf106Q8NAJ2 232 aa2.74□□□□□ -1.97
VPS13A-206ENST00000376646 DENND1AQ8TEH3 1009 aa2.74□□□□□ -1.97
VPS13A-206ENST00000376646 KBTBD7Q8WVZ9 684 aa2.74□□□□□ -1.97
VPS13A-206ENST00000376646 AIFM3Q96NN9 605 aa2.74□□□□□ -1.97
VPS13A-206ENST00000376646 EFHD1Q9BUP0 239 aa2.74□□□□□ -1.97
VPS13A-206ENST00000376646 PRSS22Q9GZN4 317 aa2.74□□□□□ -1.97
VPS13A-206ENST00000376646 VPS16Q9H269 839 aa2.74□□□□□ -1.97
VPS13A-206ENST00000376646 CHPF2Q9P2E5 772 aa2.74□□□□□ -1.97
VPS13A-206ENST00000376646 WDR17Q8IZU2 1322 aa2.74□□□□□ -1.97
VPS13A-206ENST00000376646 CES2O00748 559 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 TBC1D4O60343 1298 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 SRGAP2O75044 1071 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 MOSPD3O75425 235 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 RASAL1O95294 804 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 IGKV2-30P06310 120 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 THP07101 528 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 AGFG1P52594 562 aaKnown RBP2.73□□□□□ -1.97
VPS13A-206ENST00000376646 DAZAP2Q15038 168 aaPredicted RBP2.73□□□□□ -1.97
VPS13A-206ENST00000376646 ANO6Q4KMQ2 910 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 C3orf38Q5JPI3 329 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 CACHD1Q5VU97 1274 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 ZC3H10Q96K80 434 aaKnown RBP2.73□□□□□ -1.97
VPS13A-206ENST00000376646 FCRL4Q96PJ5 515 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 SNX18Q96RF0 628 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 C22orf23Q9BZE7 217 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 DPH1Q9BZG8 443 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 SEMA4CQ9C0C4 833 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 SACM1LQ9NTJ5 587 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 TCEAL9Q9UHQ7 104 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 AGPSO00116 658 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 PPEF2O14830 753 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 CTNND1O60716 968 aaKnown RBP2.73□□□□□ -1.97
VPS13A-206ENST00000376646 TUSC2O75896 110 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 TJP3O95049 919 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 FGAP02671 866 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 CYP2C9P11712 490 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 HGFP14210 728 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 COPB1P53618 953 aaKnown RBP2.73□□□□□ -1.97
VPS13A-206ENST00000376646 EPHB1P54762 984 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 SUMO3P55854 103 aaPredicted RBP2.73□□□□□ -1.97
VPS13A-206ENST00000376646 WNT3P56703 355 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 SATB1Q01826 763 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 MICU3Q86XE3 530 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 TSR2Q969E8 191 aaKnown RBP2.73□□□□□ -1.97
VPS13A-206ENST00000376646 AS3MTQ9HBK9 375 aa2.73□□□□□ -1.97
VPS13A-206ENST00000376646 TRMT13Q9NUP7 481 aaKnown RBP2.73□□□□□ -1.97
VPS13A-206ENST00000376646 DRG1Q9Y295 367 aaKnown RBP2.73□□□□□ -1.97
VPS13A-206ENST00000376646 POC1B-GALNT4F8VUJ3 575 aa2.72□□□□□ -1.97
VPS13A-206ENST00000376646 H7C1Q1 480 aa2.72□□□□□ -1.97
VPS13A-206ENST00000376646 FCHO1O14526 889 aa2.72□□□□□ -1.97
VPS13A-206ENST00000376646 PHGDHO43175 533 aaKnown RBP2.72□□□□□ -1.97
VPS13A-206ENST00000376646 PMPCBO75439 489 aa2.72□□□□□ -1.97
VPS13A-206ENST00000376646 CYP19A1P11511 503 aaPredicted RBP2.72□□□□□ -1.97
VPS13A-206ENST00000376646 EN2P19622 333 aaPredicted RBP2.72□□□□□ -1.97
VPS13A-206ENST00000376646 ATP5F1P24539 256 aaPredicted RBP2.72□□□□□ -1.97
VPS13A-206ENST00000376646 MMP13P45452 471 aa2.72□□□□□ -1.97
VPS13A-206ENST00000376646 LMAN2Q12907 356 aa2.72□□□□□ -1.97
VPS13A-206ENST00000376646 SEC23BQ15437 767 aa2.72□□□□□ -1.97
VPS13A-206ENST00000376646 FAM187BQ17R55 369 aa2.72□□□□□ -1.97
VPS13A-206ENST00000376646 TBC1D25Q3MII6 688 aa2.72□□□□□ -1.97
VPS13A-206ENST00000376646 APOA5Q6Q788 366 aa2.72□□□□□ -1.97
VPS13A-206ENST00000376646 MAEAQ7L5Y9 396 aa2.72□□□□□ -1.97
VPS13A-206ENST00000376646 SPARTQ8N0X7 666 aa2.72□□□□□ -1.97
VPS13A-206ENST00000376646 GALNT4Q8N4A0 578 aa2.72□□□□□ -1.97
VPS13A-206ENST00000376646 STK31Q9BXU1 1019 aa2.72□□□□□ -1.97
VPS13A-206ENST00000376646 TRNAU1APQ9NX07 287 aaKnown RBP2.72□□□□□ -1.97
VPS13A-206ENST00000376646 DDX20Q9UHI6 824 aaKnown RBP2.72□□□□□ -1.97
VPS13A-206ENST00000376646 AMFRQ9UKV5 643 aa2.72□□□□□ -1.97
VPS13A-206ENST00000376646 SCAF8Q9UPN6 1271 aaKnown RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms