RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 CHFRQ96EP1 664 aa15.69■□□□□ 0.1
HDAC6-204ENST00000376643 FAM84AQ96KN4 292 aa15.69■□□□□ 0.1
HDAC6-204ENST00000376643 SLC22A12Q96S37 553 aa15.69■□□□□ 0.1
HDAC6-204ENST00000376643 MRPL45Q9BRJ2 306 aaKnown RBP15.69■□□□□ 0.1
HDAC6-204ENST00000376643 SLC39A2Q9NP94 309 aa15.69■□□□□ 0.1
HDAC6-204ENST00000376643 VPS45Q9NRW7 570 aa15.69■□□□□ 0.1
HDAC6-204ENST00000376643 FRYLO94915 3013 aa15.69■□□□□ 0.1
HDAC6-204ENST00000376643 OAS1P00973 400 aaKnown RBP15.68■□□□□ 0.1
HDAC6-204ENST00000376643 MBL2P11226 248 aaPredicted RBP15.68■□□□□ 0.1
HDAC6-204ENST00000376643 MYL6P60660 151 aa15.68■□□□□ 0.1
HDAC6-204ENST00000376643 MRPS21P82921 87 aaKnown RBP15.68■□□□□ 0.1
HDAC6-204ENST00000376643 TAF10Q12962 218 aa15.68■□□□□ 0.1
HDAC6-204ENST00000376643 USP39Q53GS9 565 aaKnown RBP15.68■□□□□ 0.1
HDAC6-204ENST00000376643 PKN3Q6P5Z2 889 aa15.68■□□□□ 0.1
HDAC6-204ENST00000376643 SMARCD1Q96GM5 515 aa15.68■□□□□ 0.1
HDAC6-204ENST00000376643 CCDC34Q96HJ3 373 aa15.68■□□□□ 0.1
HDAC6-204ENST00000376643 HHIPQ96QV1 700 aa15.68■□□□□ 0.1
HDAC6-204ENST00000376643 MED10Q9BTT4 135 aa15.68■□□□□ 0.1
HDAC6-204ENST00000376643 IMPG2Q9BZV3 1241 aa15.68■□□□□ 0.1
HDAC6-204ENST00000376643 BLZF1Q9H2G9 400 aa15.68■□□□□ 0.1
HDAC6-204ENST00000376643 ARRDC1-AS1Q9H2J1 176 aa15.68■□□□□ 0.1
HDAC6-204ENST00000376643 DMAP1Q9NPF5 467 aaPredicted RBP15.68■□□□□ 0.1
HDAC6-204ENST00000376643 C2orf42Q9NWW7 574 aa15.68■□□□□ 0.1
HDAC6-204ENST00000376643 PCDHA7Q9UN72 937 aa15.68■□□□□ 0.1
HDAC6-204ENST00000376643 FRMD4BQ9Y2L6 1034 aa15.68■□□□□ 0.1
HDAC6-204ENST00000376643 CPQQ9Y646 472 aa15.68■□□□□ 0.1
HDAC6-204ENST00000376643 E2F8A0AVK6 867 aa15.67■□□□□ 0.1
HDAC6-204ENST00000376643 DCDC2BA2VCK2 349 aa15.67■□□□□ 0.1
HDAC6-204ENST00000376643 APODP05090 189 aa15.67■□□□□ 0.1
HDAC6-204ENST00000376643 ADRB1P08588 477 aa15.67■□□□□ 0.1
HDAC6-204ENST00000376643 AFMP43652 599 aa15.67■□□□□ 0.1
HDAC6-204ENST00000376643 DGKEP52429 567 aa15.67■□□□□ 0.1
HDAC6-204ENST00000376643 CLDN10P78369 228 aa15.67■□□□□ 0.1
HDAC6-204ENST00000376643 NCOA4Q13772 614 aa15.67■□□□□ 0.1
HDAC6-204ENST00000376643 CCDC142Q17RM4 750 aa15.67■□□□□ 0.1
HDAC6-204ENST00000376643 SGSM1Q2NKQ1 1148 aa15.67■□□□□ 0.1
HDAC6-204ENST00000376643 PPM1JQ5JR12 505 aa15.67■□□□□ 0.1
HDAC6-204ENST00000376643 HECTD3Q5T447 861 aa15.67■□□□□ 0.1
HDAC6-204ENST00000376643 BTBD8Q5XKL5 378 aa15.67■□□□□ 0.1
HDAC6-204ENST00000376643 KBTBD6Q86V97 674 aa15.67■□□□□ 0.1
HDAC6-204ENST00000376643 FBXO32Q969P5 355 aa15.67■□□□□ 0.1
HDAC6-204ENST00000376643 DUSP9Q99956 384 aaKnown RBP15.67■□□□□ 0.1
HDAC6-204ENST00000376643 ZNF518BQ9C0D4 1074 aa15.67■□□□□ 0.1
HDAC6-204ENST00000376643 NACA2Q9H009 215 aa15.67■□□□□ 0.1
HDAC6-204ENST00000376643 XYLT2Q9H1B5 865 aa15.67■□□□□ 0.1
HDAC6-204ENST00000376643 FBXO44Q9H4M3 255 aa15.67■□□□□ 0.1
HDAC6-204ENST00000376643 PDXKO00764 312 aa15.66■□□□□ 0.1
HDAC6-204ENST00000376643 IKBKBO14920 756 aa15.66■□□□□ 0.1
HDAC6-204ENST00000376643 CALUO43852 315 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-204ENST00000376643 MPLP40238 635 aa15.66■□□□□ 0.1
HDAC6-204ENST00000376643 DPP6P42658 865 aa15.66■□□□□ 0.1
HDAC6-204ENST00000376643 PXNP49023 591 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-204ENST00000376643 USP46P62068 366 aa15.66■□□□□ 0.1
HDAC6-204ENST00000376643 GOLGA8FQ08AF8 430 aa15.66■□□□□ 0.1
HDAC6-204ENST00000376643 GOLGA8DPQ0D2H9 430 aa15.66■□□□□ 0.1
HDAC6-204ENST00000376643 CUL4BQ13620 913 aa15.66■□□□□ 0.1
HDAC6-204ENST00000376643 BYSLQ13895 437 aaKnown RBP15.66■□□□□ 0.1
HDAC6-204ENST00000376643 PLK5Q496M5 336 aa15.66■□□□□ 0.1
HDAC6-204ENST00000376643 SCARA3Q6AZY7 606 aa15.66■□□□□ 0.1
HDAC6-204ENST00000376643 TRMT11Q7Z4G4 463 aaKnown RBP15.66■□□□□ 0.1
HDAC6-204ENST00000376643 FILIP1Q7Z7B0 1213 aa15.66■□□□□ 0.1
HDAC6-204ENST00000376643 UNC93AQ86WB7 457 aa15.66■□□□□ 0.1
HDAC6-204ENST00000376643 TMC2Q8TDI7 906 aa15.66■□□□□ 0.1
HDAC6-204ENST00000376643 KCNV2Q8TDN2 545 aa15.66■□□□□ 0.1
HDAC6-204ENST00000376643 PARD3BQ8TEW8 1205 aa15.66■□□□□ 0.1
HDAC6-204ENST00000376643 USP33Q8TEY7 942 aa15.66■□□□□ 0.1
HDAC6-204ENST00000376643 CNOT6LQ96LI5 555 aaKnown RBP15.66■□□□□ 0.1
HDAC6-204ENST00000376643 PNKPQ96T60 521 aa15.66■□□□□ 0.1
HDAC6-204ENST00000376643 FBRSL1Q9HCM7 1045 aaKnown RBP15.66■□□□□ 0.1
HDAC6-204ENST00000376643 RCOR1Q9UKL0 485 aa15.66■□□□□ 0.1
HDAC6-204ENST00000376643 MMP17Q9ULZ9 603 aa15.66■□□□□ 0.1
HDAC6-204ENST00000376643 SH3BP1Q9Y3L3 701 aa15.66■□□□□ 0.1
HDAC6-204ENST00000376643 NCOR2Q9Y618 2525 aa15.65■□□□□ 0.1
HDAC6-204ENST00000376643 MAPK13O15264 365 aa15.65■□□□□ 0.1
HDAC6-204ENST00000376643 CYP17A1P05093 508 aa15.65■□□□□ 0.1
HDAC6-204ENST00000376643 GBP1P32455 592 aa15.65■□□□□ 0.1
HDAC6-204ENST00000376643 GAD2Q05329 585 aa15.65■□□□□ 0.1
HDAC6-204ENST00000376643 IFRD2Q12894 506 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-204ENST00000376643 DHCR24Q15392 516 aa15.65■□□□□ 0.1
HDAC6-204ENST00000376643 EOGTQ5NDL2 527 aa15.65■□□□□ 0.1
HDAC6-204ENST00000376643 FOXD4L5Q5VV16 416 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-204ENST00000376643 SNX30Q5VWJ9 437 aa15.65■□□□□ 0.1
HDAC6-204ENST00000376643 FAM35AQ86V20 835 aa15.65■□□□□ 0.1
HDAC6-204ENST00000376643 ADGRG2Q8IZP9 1017 aa15.65■□□□□ 0.1
HDAC6-204ENST00000376643 CCDC150Q8NCX0 1101 aa15.65■□□□□ 0.1
HDAC6-204ENST00000376643 FOXD4L4Q8WXT5 416 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-204ENST00000376643 ZNF516Q92618 1163 aa15.65■□□□□ 0.1
HDAC6-204ENST00000376643 SPACA7Q96KW9 195 aa15.65■□□□□ 0.1
HDAC6-204ENST00000376643 B3GNT5Q9BYG0 378 aa15.65■□□□□ 0.1
HDAC6-204ENST00000376643 LINC00597Q9H2U6 94 aa15.65■□□□□ 0.1
HDAC6-204ENST00000376643 DPEP3Q9H4B8 488 aa15.65■□□□□ 0.1
HDAC6-204ENST00000376643 POLMQ9NP87 494 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-204ENST00000376643 SMPD4Q9NXE4 827 aa15.65■□□□□ 0.1
HDAC6-204ENST00000376643 CFAP97Q9P2B7 532 aa15.65■□□□□ 0.1
HDAC6-204ENST00000376643 ATP6V1DQ9Y5K8 247 aa15.65■□□□□ 0.1
HDAC6-204ENST00000376643 LRRIQ3A6PVS8 624 aaPredicted RBP15.64■□□□□ 0.09
HDAC6-204ENST00000376643 ZBTB24O43167 697 aaPredicted RBP15.64■□□□□ 0.09
HDAC6-204ENST00000376643 NR3C1P04150 777 aa15.64■□□□□ 0.09
HDAC6-204ENST00000376643 ADH5P11766 374 aa15.64■□□□□ 0.09
HDAC6-204ENST00000376643 CMA1P23946 247 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms