RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 USP29Q9HBJ7 922 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 SLC17A7Q9P2U7 560 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 LRRC42Q9Y546 428 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 KLF11O14901 512 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 CHADO15335 359 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 DIAPH2O60879 1101 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 ARIH2O95376 493 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 HMGCRP04035 888 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 ATICP31939 592 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 HIRAP54198 1017 aaPredicted RBP11.15□□□□□ -0.62
ABCF1-202ENST00000376545 PTPN11Q06124 597 aaPredicted RBP11.15□□□□□ -0.62
ABCF1-202ENST00000376545 FAM187BQ17R55 369 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 LY6KQ17RY6 165 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 TAF1BQ53T94 588 aaPredicted RBP11.15□□□□□ -0.62
ABCF1-202ENST00000376545 ZNF667Q5HYK9 610 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 EEF1DP3Q658K8 133 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 ILDR2Q71H61 639 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 PALM2Q8IXS6 379 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 FAM71DQ8N9W8 422 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 PTCD3Q96EY7 689 aaKnown RBP11.15□□□□□ -0.62
ABCF1-202ENST00000376545 THOC1Q96FV9 657 aaKnown RBP11.15□□□□□ -0.62
ABCF1-202ENST00000376545 FGD4Q96M96 766 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 MANSC1Q9H8J5 431 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 CYP3A43Q9HB55 503 aa11.15□□□□□ -0.62
ABCF1-202ENST00000376545 NKX1-2Q9UD57 310 aaPredicted RBP11.15□□□□□ -0.62
ABCF1-202ENST00000376545 TCRBV9S1A1TA0A576 114 aa11.15□□□□□ -0.63
ABCF1-202ENST00000376545 RPSAP08865 295 aaKnown RBP11.15□□□□□ -0.63
ABCF1-202ENST00000376545 RBP3P10745 1247 aa11.15□□□□□ -0.63
ABCF1-202ENST00000376545 CALB2P22676 271 aa11.15□□□□□ -0.63
ABCF1-202ENST00000376545 GBP2P32456 591 aaPredicted RBP11.15□□□□□ -0.63
ABCF1-202ENST00000376545 CDH8P55286 799 aa11.15□□□□□ -0.63
ABCF1-202ENST00000376545 POU5F1BQ06416 359 aa11.15□□□□□ -0.63
ABCF1-202ENST00000376545 CELF3Q5SZQ8 465 aaKnown RBP11.15□□□□□ -0.63
ABCF1-202ENST00000376545 TREML2Q5T2D2 321 aa11.15□□□□□ -0.63
ABCF1-202ENST00000376545 FYB2Q5VWT5 728 aa11.15□□□□□ -0.63
ABCF1-202ENST00000376545 FAM91A1Q658Y4 838 aa11.15□□□□□ -0.63
ABCF1-202ENST00000376545 TRNP1Q6NT89 227 aa11.15□□□□□ -0.63
ABCF1-202ENST00000376545 RFX6Q8HWS3 928 aa11.15□□□□□ -0.63
ABCF1-202ENST00000376545 TMEM192Q8IY95 271 aa11.15□□□□□ -0.63
ABCF1-202ENST00000376545 LRRC71Q8N4P6 559 aa11.15□□□□□ -0.63
ABCF1-202ENST00000376545 CEP120Q8N960 986 aa11.15□□□□□ -0.63
ABCF1-202ENST00000376545 PTPRN2Q92932 1015 aa11.15□□□□□ -0.63
ABCF1-202ENST00000376545 TMEM176AQ96HP8 235 aa11.15□□□□□ -0.63
ABCF1-202ENST00000376545 ASNSD1Q9NWL6 643 aa11.15□□□□□ -0.63
ABCF1-202ENST00000376545 DONSONQ9NYP3 566 aa11.15□□□□□ -0.63
ABCF1-202ENST00000376545 HMGXB4Q9UGU5 601 aa11.15□□□□□ -0.63
ABCF1-202ENST00000376545 IQANK1A0A1B0GTG1 560 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 C2CD4BA6NLJ0 364 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 HGSO14964 777 aaPredicted RBP11.14□□□□□ -0.63
ABCF1-202ENST00000376545 MCF2LO15068 1137 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 B4GALT5O43286 388 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 KIF1CO43896 1103 aaKnown RBP11.14□□□□□ -0.63
ABCF1-202ENST00000376545 IQCF3P0C7M6 154 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 ELK3P41970 407 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 INCA1Q0VD86 236 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 ANKRD20A2Q5SQ80 823 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 ANKRD20A1Q5TYW2 823 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 ANKRD20A3Q5VUR7 823 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 RFWD2Q8NHY2 731 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 SPATA18Q8TC71 538 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 STK32AQ8WU08 396 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 SKA1Q96BD8 255 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 APOPT1Q96IL0 206 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 SERAC1Q96JX3 654 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 FRMD8Q9BZ67 464 aaPredicted RBP11.14□□□□□ -0.63
ABCF1-202ENST00000376545 ZFP69BQ9UJL9 534 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 CBX6O95503 412 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 STAU1O95793 577 aaKnown RBP11.14□□□□□ -0.63
ABCF1-202ENST00000376545 TPBGLP0DKB5 382 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 VDRP11473 427 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 CD19P15391 556 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 IL4RP24394 825 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 SATB1Q01826 763 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 HSDL1Q3SXM5 330 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 FAM47CQ5HY64 1035 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 MTDHQ86UE4 582 aaKnown RBP11.14□□□□□ -0.63
ABCF1-202ENST00000376545 IFNLR1Q8IU57 520 aaPredicted RBP11.14□□□□□ -0.63
ABCF1-202ENST00000376545 MRRFQ96E11 262 aaKnown RBP11.14□□□□□ -0.63
ABCF1-202ENST00000376545 TUBB6Q9BUF5 446 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 ADAM33Q9BZ11 813 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 SMYD3Q9H7B4 428 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 MINDY3Q9H8M7 445 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 PLAC1Q9HBJ0 212 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 NPHS2Q9NP85 383 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 NXF1Q9UBU9 619 aaKnown RBP11.14□□□□□ -0.63
ABCF1-202ENST00000376545 ZNF180Q9UJW8 692 aa11.14□□□□□ -0.63
ABCF1-202ENST00000376545 GPR25O00155 361 aa11.13□□□□□ -0.63
ABCF1-202ENST00000376545 LIN7AO14910 233 aaPredicted RBP11.13□□□□□ -0.63
ABCF1-202ENST00000376545 PEX10O60683 326 aa11.13□□□□□ -0.63
ABCF1-202ENST00000376545 USP2O75604 605 aaPredicted RBP11.13□□□□□ -0.63
ABCF1-202ENST00000376545 RNF8O76064 485 aa11.13□□□□□ -0.63
ABCF1-202ENST00000376545 NFICP08651 508 aa11.13□□□□□ -0.63
ABCF1-202ENST00000376545 DLDP09622 509 aaKnown RBP11.13□□□□□ -0.63
ABCF1-202ENST00000376545 CXCL8P10145 99 aa11.13□□□□□ -0.63
ABCF1-202ENST00000376545 TROVE2P10155 538 aaKnown RBP eCLIP11.13□□□□□ -0.63
ABCF1-202ENST00000376545 GCKP35557 465 aa11.13□□□□□ -0.63
ABCF1-202ENST00000376545 SLC26A2P50443 739 aa11.13□□□□□ -0.63
ABCF1-202ENST00000376545 ROR1Q01973 937 aa11.13□□□□□ -0.63
ABCF1-202ENST00000376545 BBS9Q3SYG4 887 aa11.13□□□□□ -0.63
ABCF1-202ENST00000376545 WDR78Q5VTH9 848 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms