RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 ADGRF2Q8IZF7 708 aa14.03□□□□□ -0.16
CLCN6-205ENST00000376492 TXNDC5Q8NBS9 432 aaKnown RBP14.03□□□□□ -0.16
CLCN6-205ENST00000376492 OLIG1Q8TAK6 271 aa14.03□□□□□ -0.16
CLCN6-205ENST00000376492 ZDHHC4Q9NPG8 344 aa14.03□□□□□ -0.16
CLCN6-205ENST00000376492 FSCN3Q9NQT6 498 aa14.03□□□□□ -0.16
CLCN6-205ENST00000376492 TMEM74BQ9NUR3 256 aa14.03□□□□□ -0.16
CLCN6-205ENST00000376492 USP25Q9UHP3 1055 aa14.03□□□□□ -0.16
CLCN6-205ENST00000376492 EVLQ9UI08 416 aaPredicted RBP14.03□□□□□ -0.16
CLCN6-205ENST00000376492 SIX4Q9UIU6 781 aa14.03□□□□□ -0.16
CLCN6-205ENST00000376492 PCDHB13Q9Y5F0 798 aa14.03□□□□□ -0.16
CLCN6-205ENST00000376492 SNX9Q9Y5X1 595 aa14.03□□□□□ -0.16
CLCN6-205ENST00000376492 A0A1B0GVL5 298 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 SPAARA0A1B0GVQ0 90 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 SGK1O00141 431 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 LEFTY2O00292 366 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 KLF8O95600 359 aaPredicted RBP14.02□□□□□ -0.17
CLCN6-205ENST00000376492 KRT19P08727 400 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 TCF3P15923 654 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 PFKFB1P16118 471 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 P2RY2P41231 377 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 SLC6A11P48066 632 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 POU5F1Q01860 360 aaKnown RBP14.02□□□□□ -0.17
CLCN6-205ENST00000376492 RING1Q06587 406 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 ALCAMQ13740 583 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 FILIP1Q7Z7B0 1213 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 C12orf40Q86WS4 652 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 NT5DC4Q86YG4 428 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 BRSK2Q8IWQ3 736 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 TMEM86AQ8N2M4 240 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 CSGALNACT2Q8N6G5 542 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 FSIP1Q8NA03 581 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 IL17RCQ8NAC3 791 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 CCDC26Q8TAB7 109 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 MYLPFQ96A32 169 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 MTMR12Q9C0I1 747 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 RBAKQ9NYW8 714 aaPredicted RBP14.02□□□□□ -0.17
CLCN6-205ENST00000376492 TBC1D7Q9P0N9 293 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 MBD1Q9UIS9 605 aaPredicted RBP14.02□□□□□ -0.17
CLCN6-205ENST00000376492 KLK13Q9UKR3 277 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 FREM2Q5SZK8 3169 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 TCHHQ07283 1943 aa14.02□□□□□ -0.17
CLCN6-205ENST00000376492 DMXL2Q8TDJ6 3036 aa14.01□□□□□ -0.17
CLCN6-205ENST00000376492 PVALEFA0A1B0GWK0 134 aa14.01□□□□□ -0.17
CLCN6-205ENST00000376492 GOLGA8IPA6NC78 632 aa14.01□□□□□ -0.17
CLCN6-205ENST00000376492 GOLGA8JA6NMD2 632 aa14.01□□□□□ -0.17
CLCN6-205ENST00000376492 GABRDO14764 452 aa14.01□□□□□ -0.17
CLCN6-205ENST00000376492 ACTN4O43707 911 aaKnown RBP14.01□□□□□ -0.17
CLCN6-205ENST00000376492 ENGP17813 658 aa14.01□□□□□ -0.17
CLCN6-205ENST00000376492 TIE1P35590 1138 aa14.01□□□□□ -0.17
CLCN6-205ENST00000376492 LMAN2Q12907 356 aa14.01□□□□□ -0.17
CLCN6-205ENST00000376492 SOWAHAQ2M3V2 549 aa14.01□□□□□ -0.17
CLCN6-205ENST00000376492 L1TD1Q5T7N2 865 aaKnown RBP14.01□□□□□ -0.17
CLCN6-205ENST00000376492 EMC10Q5UCC4 262 aa14.01□□□□□ -0.17
CLCN6-205ENST00000376492 FAM171BQ6P995 826 aa14.01□□□□□ -0.17
CLCN6-205ENST00000376492 LPCAT2Q7L5N7 544 aa14.01□□□□□ -0.17
CLCN6-205ENST00000376492 CEP57L1Q8IYX8 460 aa14.01□□□□□ -0.17
CLCN6-205ENST00000376492 TOP6BLQ8N6T0 577 aa14.01□□□□□ -0.17
CLCN6-205ENST00000376492 LRRC52Q8N7C0 313 aa14.01□□□□□ -0.17
CLCN6-205ENST00000376492 PAGE5Q96GU1 130 aa14.01□□□□□ -0.17
CLCN6-205ENST00000376492 FUBP3Q96I24 572 aaKnown RBP eCLIP14.01□□□□□ -0.17
CLCN6-205ENST00000376492 ACCSQ96QU6 501 aa14.01□□□□□ -0.17
CLCN6-205ENST00000376492 NUSAP1Q9BXS6 441 aaKnown RBP14.01□□□□□ -0.17
CLCN6-205ENST00000376492 SMPD4Q9NXE4 827 aa14.01□□□□□ -0.17
CLCN6-205ENST00000376492 GDAP2Q9NXN4 497 aa14.01□□□□□ -0.17
CLCN6-205ENST00000376492 SERTAD1Q9UHV2 236 aa14.01□□□□□ -0.17
CLCN6-205ENST00000376492 ITGA11Q9UKX5 1188 aa14.01□□□□□ -0.17
CLCN6-205ENST00000376492 EXOC7Q9UPT5 735 aa14.01□□□□□ -0.17
CLCN6-205ENST00000376492 NUP205Q92621 2012 aa14.01□□□□□ -0.17
CLCN6-205ENST00000376492 ZNF638Q14966 1978 aaKnown RBP14.01□□□□□ -0.17
CLCN6-205ENST00000376492 FASNP49327 2511 aaKnown RBP14.01□□□□□ -0.17
CLCN6-205ENST00000376492 CACNA1EQ15878 2313 aa14.01□□□□□ -0.17
CLCN6-205ENST00000376492 TNFRSF10BO14763 440 aa14□□□□□ -0.17
CLCN6-205ENST00000376492 MAP3K13O43283 966 aa14□□□□□ -0.17
CLCN6-205ENST00000376492 ALDH1A2O94788 518 aa14□□□□□ -0.17
CLCN6-205ENST00000376492 GCNT3O95395 438 aa14□□□□□ -0.17
CLCN6-205ENST00000376492 BDNFP23560 247 aa14□□□□□ -0.17
CLCN6-205ENST00000376492 LMO2P25791 158 aa14□□□□□ -0.17
CLCN6-205ENST00000376492 PCSK1P29120 753 aa14□□□□□ -0.17
CLCN6-205ENST00000376492 MAGEA11P43364 429 aa14□□□□□ -0.17
CLCN6-205ENST00000376492 LHX1P48742 406 aa14□□□□□ -0.17
CLCN6-205ENST00000376492 CASP5P51878 434 aa14□□□□□ -0.17
CLCN6-205ENST00000376492 ASIC1P78348 528 aa14□□□□□ -0.17
CLCN6-205ENST00000376492 SIM1P81133 766 aaPredicted RBP14□□□□□ -0.17
CLCN6-205ENST00000376492 MRPS21P82921 87 aaKnown RBP14□□□□□ -0.17
CLCN6-205ENST00000376492 KDSRQ06136 332 aa14□□□□□ -0.17
CLCN6-205ENST00000376492 EHHADHQ08426 723 aa14□□□□□ -0.17
CLCN6-205ENST00000376492 ACAP1Q15027 740 aa14□□□□□ -0.17
CLCN6-205ENST00000376492 POSTNQ15063 836 aa14□□□□□ -0.17
CLCN6-205ENST00000376492 DHCR24Q15392 516 aa14□□□□□ -0.17
CLCN6-205ENST00000376492 MAP7D1Q3KQU3 841 aa14□□□□□ -0.17
CLCN6-205ENST00000376492 LYSMD4Q5XG99 296 aa14□□□□□ -0.17
CLCN6-205ENST00000376492 LMBRD2Q68DH5 695 aaPredicted RBP14□□□□□ -0.17
CLCN6-205ENST00000376492 UNC13DQ70J99 1090 aa14□□□□□ -0.17
CLCN6-205ENST00000376492 SYT12Q8IV01 421 aa14□□□□□ -0.17
CLCN6-205ENST00000376492 SPATA18Q8TC71 538 aa14□□□□□ -0.17
CLCN6-205ENST00000376492 WHAMMQ8TF30 809 aa14□□□□□ -0.17
CLCN6-205ENST00000376492 NOC3LQ8WTT2 800 aaKnown RBP14□□□□□ -0.17
CLCN6-205ENST00000376492 KBTBD7Q8WVZ9 684 aa14□□□□□ -0.17
CLCN6-205ENST00000376492 HMGB4Q8WW32 186 aa14□□□□□ -0.17
CLCN6-205ENST00000376492 SPACA7Q96KW9 195 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms