RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 EBF3Q9H4W6 596 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 ATG7O95352 703 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 OATP04181 439 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 ETS1P14921 441 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 CRABP2P29373 138 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 ARL4CP56559 192 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 NOP14P78316 857 aaKnown RBP13.5□□□□□ -0.25
MSH5-204ENST00000375755 CETN1Q12798 172 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 SEPT7Q16181 437 aaKnown RBP13.5□□□□□ -0.25
MSH5-204ENST00000375755 RIPOR1Q6ZS17 1223 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 MAP4K3Q8IVH8 894 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 ZBED8Q8IZ13 594 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 PANX3Q96QZ0 392 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 PHACTR1Q9C0D0 580 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 TMEM117Q9H0C3 514 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 PPM1HQ9ULR3 514 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 B2RBV5 119 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 DNALI1O14645 258 aaPredicted RBP13.5□□□□□ -0.25
MSH5-204ENST00000375755 BAG2O95816 211 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 ZBTB41Q5SVQ8 909 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 ACAD10Q6JQN1 1059 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 MYLK4Q86YV6 388 aaPredicted RBP13.5□□□□□ -0.25
MSH5-204ENST00000375755 STKLD1Q8NE28 680 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 HIC2Q96JB3 615 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 PLEKHG4BQ96PX9 1271 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 NMUR2Q9GZQ4 415 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 NDE1Q9NXR1 346 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 IL1RAPL1Q9NZN1 696 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 SLC24A2Q9UI40 661 aa13.5□□□□□ -0.25
MSH5-204ENST00000375755 MTO1Q9Y2Z2 717 aaKnown RBP13.5□□□□□ -0.25
MSH5-204ENST00000375755 F8W8V4 182 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 HNRNPDLO14979 420 aaKnown RBP13.49□□□□□ -0.25
MSH5-204ENST00000375755 GRIN3BO60391 1043 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 COQ9O75208 318 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 STAM2O75886 525 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 DGAT1O75907 488 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 GJB1P08034 283 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 DLDP09622 509 aaKnown RBP13.49□□□□□ -0.25
MSH5-204ENST00000375755 GLRA2P23416 452 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 SLC1A1P43005 524 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 PDIA2Q13087 525 aaKnown RBP13.49□□□□□ -0.25
MSH5-204ENST00000375755 XKR3Q5GH77 459 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 CFAP157Q5JU67 520 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 ST13P4Q8IZP2 240 aaPredicted RBP13.49□□□□□ -0.25
MSH5-204ENST00000375755 TRAPPC12Q8WVT3 735 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 POMGNT1Q8WZA1 660 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 SHC3Q92529 594 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 PPP2R3CQ969Q6 453 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 OLFM3Q96PB7 478 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 MMP19Q99542 508 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 ST6GALNAC4Q9H4F1 302 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 FBXO40Q9UH90 709 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 H3BRJ5 948 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 MAGEC1O60732 1142 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 PABPC4LP0CB38 370 aaKnown RBP13.49□□□□□ -0.25
MSH5-204ENST00000375755 C2CD6Q53TS8 623 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 CEP128Q6ZU80 1094 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 ALYREFQ86V81 257 aaKnown RBP13.49□□□□□ -0.25
MSH5-204ENST00000375755 SPATA24Q86W54 205 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 ANKMY2Q8IV38 441 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 ARHGAP24Q8N264 748 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 ZC3H15Q8WU90 426 aaKnown RBP13.49□□□□□ -0.25
MSH5-204ENST00000375755 DDX1Q92499 740 aaKnown RBP13.49□□□□□ -0.25
MSH5-204ENST00000375755 SLC10A4Q96EP9 437 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 OXNAD1Q96HP4 312 aaPredicted RBP13.49□□□□□ -0.25
MSH5-204ENST00000375755 FAM213AQ9BRX8 229 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 SSU72Q9NP77 194 aaKnown RBP13.49□□□□□ -0.25
MSH5-204ENST00000375755 HSFX1Q9UBD0 423 aa13.49□□□□□ -0.25
MSH5-204ENST00000375755 FAM163BP0C2L3 166 aa13.48□□□□□ -0.25
MSH5-204ENST00000375755 FAM200BP0CF97 657 aa13.48□□□□□ -0.25
MSH5-204ENST00000375755 MYL2P10916 166 aa13.48□□□□□ -0.25
MSH5-204ENST00000375755 HARSP12081 509 aaKnown RBP13.48□□□□□ -0.25
MSH5-204ENST00000375755 VAV1P15498 845 aa13.48□□□□□ -0.25
MSH5-204ENST00000375755 GPX6P59796 221 aa13.48□□□□□ -0.25
MSH5-204ENST00000375755 RASA2Q15283 850 aa13.48□□□□□ -0.25
MSH5-204ENST00000375755 EFHC2Q5JST6 749 aa13.48□□□□□ -0.25
MSH5-204ENST00000375755 LDLRAD1Q5T700 205 aa13.48□□□□□ -0.25
MSH5-204ENST00000375755 RAPH1Q70E73 1250 aa13.48□□□□□ -0.25
MSH5-204ENST00000375755 TREML1Q86YW5 311 aa13.48□□□□□ -0.25
MSH5-204ENST00000375755 RBM15BQ8NDT2 890 aaKnown RBP13.48□□□□□ -0.25
MSH5-204ENST00000375755 CCDC110Q8TBZ0 833 aa13.48□□□□□ -0.25
MSH5-204ENST00000375755 NTPCRQ9BSD7 190 aaKnown RBP13.48□□□□□ -0.25
MSH5-204ENST00000375755 PI4K2AQ9BTU6 479 aa13.48□□□□□ -0.25
MSH5-204ENST00000375755 VPS11Q9H270 941 aa13.48□□□□□ -0.25
MSH5-204ENST00000375755 LRRIQ4A6NIV6 560 aa13.48□□□□□ -0.25
MSH5-204ENST00000375755 ALOX15BO15296 676 aa13.48□□□□□ -0.25
MSH5-204ENST00000375755 HNRNPRO43390 633 aaKnown RBP13.48□□□□□ -0.25
MSH5-204ENST00000375755 BUD23O43709 281 aaKnown RBP13.48□□□□□ -0.25
MSH5-204ENST00000375755 OR6B1O95007 311 aa13.48□□□□□ -0.25
MSH5-204ENST00000375755 ASLP04424 464 aa13.48□□□□□ -0.25
MSH5-204ENST00000375755 GJC1P36383 396 aa13.48□□□□□ -0.25
MSH5-204ENST00000375755 ACOT2P49753 483 aa13.48□□□□□ -0.25
MSH5-204ENST00000375755 TAS2R40P59535 323 aa13.48□□□□□ -0.25
MSH5-204ENST00000375755 NET1Q7Z628 596 aaPredicted RBP13.48□□□□□ -0.25
MSH5-204ENST00000375755 SCUBE1Q8IWY4 988 aa13.48□□□□□ -0.25
MSH5-204ENST00000375755 SLC25A41Q8N5S1 370 aa13.48□□□□□ -0.25
MSH5-204ENST00000375755 SMC1BQ8NDV3 1235 aa13.48□□□□□ -0.25
MSH5-204ENST00000375755 DHX38Q92620 1227 aaKnown RBP13.48□□□□□ -0.25
MSH5-204ENST00000375755 IGKV6D-21A0A0A0MT36 114 aa13.48□□□□□ -0.25
MSH5-204ENST00000375755 P4HA2O15460 535 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms