RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 PECAM1P16284 738 aaPredicted RBP14.64□□□□□ -0.07
MSH5-202ENST00000375740 CYP3A5P20815 502 aa14.64□□□□□ -0.07
MSH5-202ENST00000375740 CCND1P24385 295 aa14.64□□□□□ -0.07
MSH5-202ENST00000375740 KDELR1P24390 212 aa14.64□□□□□ -0.07
MSH5-202ENST00000375740 HOXA11P31270 313 aaPredicted RBP14.64□□□□□ -0.07
MSH5-202ENST00000375740 VCPP55072 806 aaKnown RBP14.64□□□□□ -0.07
MSH5-202ENST00000375740 DYNLT1P63172 113 aa14.64□□□□□ -0.07
MSH5-202ENST00000375740 INCA1Q0VD86 236 aa14.64□□□□□ -0.07
MSH5-202ENST00000375740 OASLQ15646 514 aaKnown RBP14.64□□□□□ -0.07
MSH5-202ENST00000375740 GPR162Q16538 588 aa14.64□□□□□ -0.07
MSH5-202ENST00000375740 TRIM68Q6AZZ1 485 aa14.64□□□□□ -0.07
MSH5-202ENST00000375740 GBA2Q9HCG7 927 aaPredicted RBP14.64□□□□□ -0.07
MSH5-202ENST00000375740 SNTG2Q9NY99 539 aa14.64□□□□□ -0.07
MSH5-202ENST00000375740 TRIP11Q15643 1979 aa14.64□□□□□ -0.07
MSH5-202ENST00000375740 DNALI1O14645 258 aaPredicted RBP14.64□□□□□ -0.07
MSH5-202ENST00000375740 RAB27AP51159 221 aa14.64□□□□□ -0.07
MSH5-202ENST00000375740 GPS1Q13098 491 aa14.64□□□□□ -0.07
MSH5-202ENST00000375740 ARMC3Q5W041 872 aa14.64□□□□□ -0.07
MSH5-202ENST00000375740 SPRYD7Q5W111 196 aa14.64□□□□□ -0.07
MSH5-202ENST00000375740 EXOC3L1Q86VI1 746 aa14.64□□□□□ -0.07
MSH5-202ENST00000375740 NT5DC4Q86YG4 428 aa14.64□□□□□ -0.07
MSH5-202ENST00000375740 NKD2Q969F2 451 aaPredicted RBP14.64□□□□□ -0.07
MSH5-202ENST00000375740 KLHL29Q96CT2 875 aa14.64□□□□□ -0.07
MSH5-202ENST00000375740 C9orf72Q96LT7 481 aa14.64□□□□□ -0.07
MSH5-202ENST00000375740 SERPINB12Q96P63 405 aa14.64□□□□□ -0.07
MSH5-202ENST00000375740 TMEM121Q9BTD3 319 aa14.64□□□□□ -0.07
MSH5-202ENST00000375740 PIDD1Q9HB75 910 aa14.64□□□□□ -0.07
MSH5-202ENST00000375740 ZMYND8Q9ULU4 1186 aaPredicted RBP14.64□□□□□ -0.07
MSH5-202ENST00000375740 SNX3O60493 162 aa14.63□□□□□ -0.07
MSH5-202ENST00000375740 STAU1O95793 577 aaKnown RBP14.63□□□□□ -0.07
MSH5-202ENST00000375740 CD48P09326 243 aa14.63□□□□□ -0.07
MSH5-202ENST00000375740 TAF5Q15542 800 aa14.63□□□□□ -0.07
MSH5-202ENST00000375740 ZCCHC9Q8N567 271 aaKnown RBP14.63□□□□□ -0.07
MSH5-202ENST00000375740 C12orf29Q8N999 325 aa14.63□□□□□ -0.07
MSH5-202ENST00000375740 ZMAT2Q96NC0 199 aaKnown RBP14.63□□□□□ -0.07
MSH5-202ENST00000375740 RBM15Q96T37 977 aaKnown RBP eCLIP14.63□□□□□ -0.074e-7■■■□□ 15.4
MSH5-202ENST00000375740 PARK7Q99497 189 aaKnown RBP14.63□□□□□ -0.07
MSH5-202ENST00000375740 NKX1-2Q9UD57 310 aaPredicted RBP14.63□□□□□ -0.07
MSH5-202ENST00000375740 RRN3P2A6NIE6 340 aa14.63□□□□□ -0.07
MSH5-202ENST00000375740 CST8O60676 142 aa14.63□□□□□ -0.07
MSH5-202ENST00000375740 GPR32O75388 356 aa14.63□□□□□ -0.07
MSH5-202ENST00000375740 ITGAVP06756 1048 aa14.63□□□□□ -0.07
MSH5-202ENST00000375740 MIPP30301 263 aa14.63□□□□□ -0.07
MSH5-202ENST00000375740 FAM110CQ1W6H9 321 aa14.63□□□□□ -0.07
MSH5-202ENST00000375740 DCAF4L1Q3SXM0 396 aa14.63□□□□□ -0.07
MSH5-202ENST00000375740 GALNTL6Q49A17 601 aa14.63□□□□□ -0.07
MSH5-202ENST00000375740 FAM102AQ5T9C2 384 aaPredicted RBP14.63□□□□□ -0.07
MSH5-202ENST00000375740 LCLAT1Q6UWP7 414 aa14.63□□□□□ -0.07
MSH5-202ENST00000375740 CATSPER4Q7RTX7 472 aa14.63□□□□□ -0.07
MSH5-202ENST00000375740 SLC35B2Q8TB61 432 aa14.63□□□□□ -0.07
MSH5-202ENST00000375740 NT5C1AQ9BXI3 368 aa14.63□□□□□ -0.07
MSH5-202ENST00000375740 OSBPL1AQ9BXW6 950 aa14.63□□□□□ -0.07
MSH5-202ENST00000375740 EIF2AQ9BY44 585 aaKnown RBP14.63□□□□□ -0.07
MSH5-202ENST00000375740 GCOM2Q9BZD3 368 aaPredicted RBP14.63□□□□□ -0.07
MSH5-202ENST00000375740 ZCWPW1Q9H0M4 648 aa14.63□□□□□ -0.07
MSH5-202ENST00000375740 MLXIPLQ9NP71 852 aa14.63□□□□□ -0.07
MSH5-202ENST00000375740 CTNNAL1Q9UBT7 734 aa14.63□□□□□ -0.07
MSH5-202ENST00000375740 TSPAN16Q9UKR8 245 aa14.63□□□□□ -0.07
MSH5-202ENST00000375740 KIAA1257Q9ULG3 409 aa14.63□□□□□ -0.07
MSH5-202ENST00000375740 FOXO6A8MYZ6 492 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 SGK1O00141 431 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 PPEF2O14830 753 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 RNF8O76064 485 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 MSH2P43246 934 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 MAGEA4P43358 317 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 RNASELQ05823 741 aaKnown RBP14.62□□□□□ -0.07
MSH5-202ENST00000375740 RELL1Q8IUW5 271 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 KCTD6Q8NC69 237 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 MGARPQ8TDB4 240 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 C10orf88Q9H8K7 445 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 FGFR1OP2Q9NVK5 253 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 ZFATQ9P243 1243 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 CPSF2Q9P2I0 782 aaKnown RBP14.62□□□□□ -0.07
MSH5-202ENST00000375740 EFR3BQ9Y2G0 817 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 HES2Q9Y543 173 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 SLC15A5A6NIM6 579 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 TRUB2O95900 331 aaKnown RBP14.62□□□□□ -0.07
MSH5-202ENST00000375740 PFKMP08237 780 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 SMIM10L2AP0DMW4 78 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 SMIM10L2BP0DMW5 78 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 CREB1P16220 341 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 ATP2A2P16615 1042 aaKnown RBP14.62□□□□□ -0.07
MSH5-202ENST00000375740 OTUD4Q01804 1114 aaKnown RBP14.62□□□□□ -0.07
MSH5-202ENST00000375740 RBBP5Q15291 538 aaKnown RBP14.62□□□□□ -0.07
MSH5-202ENST00000375740 TAF11Q15544 211 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 SH3PXD2AQ5TCZ1 1133 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 OR6B2Q6IFH4 312 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 TAOK1Q7L7X3 1001 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 FITM2Q8N6M3 262 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 CMASQ8NFW8 434 aaPredicted RBP14.62□□□□□ -0.07
MSH5-202ENST00000375740 ACTL9Q8TC94 416 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 HSPH1Q92598 858 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 ARHGEF2Q92974 986 aaKnown RBP14.62□□□□□ -0.07
MSH5-202ENST00000375740 NAF1Q96HR8 494 aaKnown RBP14.62□□□□□ -0.07
MSH5-202ENST00000375740 OSMRQ99650 979 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 MRPL45Q9BRJ2 306 aaKnown RBP14.62□□□□□ -0.07
MSH5-202ENST00000375740 FOXP3Q9BZS1 431 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 PLEKHA5Q9HAU0 1116 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 RNF19AQ9NV58 838 aa14.62□□□□□ -0.07
MSH5-202ENST00000375740 SNX9Q9Y5X1 595 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms