RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 WNK4Q96J92 1243 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 ZMAT2Q96NC0 199 aaKnown RBP11.95□□□□□ -0.5
PTCH1-203ENST00000375274 MMTAG2Q9BU76 263 aaKnown RBP11.95□□□□□ -0.5
PTCH1-203ENST00000375274 AGO4Q9HCK5 861 aaKnown RBP11.95□□□□□ -0.5
PTCH1-203ENST00000375274 TMEM247A6NEH6 219 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 ZNF263O14978 683 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 NFKBIAP25963 317 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 SERPINB10P48595 397 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 TMEM62Q0P6H9 643 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 DUPD1Q68J44 220 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 CCDC33Q8N5R6 958 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 TRIM54Q9BYV2 358 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 DEFB129Q9H1M3 183 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 LRRC40Q9H9A6 602 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 TJP2Q9UDY2 1190 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 TNS2Q63HR2 1409 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 NCAM1P13591 858 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 DRD4P21917 467 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 PLOD1Q02809 727 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-203ENST00000375274 PRAMEF18Q5VWM3 479 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 BNC2Q6ZN30 1099 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-203ENST00000375274 C1orf186Q6ZWK4 172 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 IRF2BP2Q7Z5L9 587 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 LNX1Q8TBB1 728 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-203ENST00000375274 HES6Q96HZ4 224 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 KCNMB3Q9NPA1 279 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 DDX4Q9NQI0 724 aaKnown RBP11.95□□□□□ -0.5
PTCH1-203ENST00000375274 SOX13Q9UN79 622 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 RIC1Q4ADV7 1423 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 E9PBE3 544 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 M0QYT0 321 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 KLHL41O60662 606 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 CPA3P15088 417 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 AASDHQ4L235 1098 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-203ENST00000375274 SEL1L3Q68CR1 1132 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 TTC33Q6PID6 262 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-203ENST00000375274 MPZL3Q6UWV2 235 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 CRELD2Q6UXH1 353 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-203ENST00000375274 FASTKD5Q7L8L6 764 aaKnown RBP11.95□□□□□ -0.5
PTCH1-203ENST00000375274 ACOT1Q86TX2 421 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 WDR49Q8IV35 697 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 ZCCHC9Q8N567 271 aaKnown RBP11.95□□□□□ -0.5
PTCH1-203ENST00000375274 DDI1Q8WTU0 396 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 TNFRSF25Q93038 417 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 ASIC4Q96FT7 647 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 RNPEPL1Q9HAU8 725 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 ACP6Q9NPH0 428 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 SAR1AQ9NR31 198 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 IL1RAPL1Q9NZN1 696 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-203ENST00000375274 ZNF229Q9UJW7 825 aa11.95□□□□□ -0.5
PTCH1-203ENST00000375274 DEAF1O75398 565 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-203ENST00000375274 NDUFS3O75489 264 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 CLPTM1O96005 669 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 RECQLP46063 649 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-203ENST00000375274 GCLCP48506 637 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-203ENST00000375274 LINC00523Q86TU6 105 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 SAMD3Q8N6K7 520 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 ZNF555Q8NEP9 628 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 APBB2Q92870 758 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 PPP1R2P1Q96PQ5 205 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 KBTBD13C9JR72 458 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 GH1P01241 217 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 GYS1P13807 737 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 PAX7P23759 505 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 SERPINB8P50452 374 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 KBTBD12Q3ZCT8 623 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 WLSQ5T9L3 541 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 IYDQ6PHW0 289 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 DEFB107AQ8IZN7 70 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 OR6J1Q8NGC5 347 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 SPIRE2Q8WWL2 714 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 SRPK1Q96SB4 655 aaKnown RBP11.94□□□□□ -0.5
PTCH1-203ENST00000375274 DDIT4Q9NX09 232 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 DPP3Q9NY33 737 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 AFF4Q9UHB7 1163 aaKnown RBP11.94□□□□□ -0.5
PTCH1-203ENST00000375274 PAIP2BQ9ULR5 123 aaKnown RBP11.94□□□□□ -0.5
PTCH1-203ENST00000375274 TISP43B9A030 160 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 PMPCBO75439 489 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 UNC5CO95185 931 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 MARCKSL1P49006 195 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 FOXR2Q6PJQ5 311 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 FAM131BQ86XD5 332 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 SLC25A41Q8N5S1 370 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 INPP5DQ92835 1189 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 OXNAD1Q96HP4 312 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-203ENST00000375274 APOPT1Q96IL0 206 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 KLHL4Q9C0H6 718 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 ARMCX1Q9P291 453 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 SLC8A2Q9UPR5 921 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 TCHHQ07283 1943 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 TMEM150BA6NC51 233 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 SUPT7LO94864 414 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 APOA1P02647 267 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 PSMC3P17980 439 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 TFE3P19532 575 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-203ENST00000375274 PCSK1P29120 753 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 GRIK1P39086 918 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 GLRBP48167 497 aa11.94□□□□□ -0.5
PTCH1-203ENST00000375274 CLCN3P51790 818 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms