RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 ERP44Q9BS26 406 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 ESYT1Q9BSJ8 1104 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 BTBD2Q9BX70 525 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 CCDC88AQ3V6T2 1871 aa9.45□□□□□ -0.9
UBR4-201ENST00000375218 TAF4O00268 1085 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 MTX2O75431 263 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 MX1P20591 662 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 TIMM10P62072 90 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 SMAD2Q15796 467 aaKnown RBP9.44□□□□□ -0.9
UBR4-201ENST00000375218 ZBTB41Q5SVQ8 909 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 TBC1D9BQ66K14 1250 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 VSIG10LQ86VR7 867 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 SRRM1Q8IYB3 904 aaKnown RBP9.44□□□□□ -0.9
UBR4-201ENST00000375218 ZGPATQ8N5A5 531 aaKnown RBP9.44□□□□□ -0.9
UBR4-201ENST00000375218 MNTQ99583 582 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 HNRNPABQ99729 332 aaKnown RBP9.44□□□□□ -0.9
UBR4-201ENST00000375218 GOLGA8BA8MQT2 603 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 F8W8V4 182 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 HAT1O14929 419 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 INHBAP08476 426 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 IL10P22301 178 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 TKTP29401 623 aaKnown RBP9.44□□□□□ -0.9
UBR4-201ENST00000375218 YWHAHQ04917 246 aaPredicted RBP9.44□□□□□ -0.9
UBR4-201ENST00000375218 CYLC2Q14093 348 aaPredicted RBP9.44□□□□□ -0.9
UBR4-201ENST00000375218 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.44□□□□□ -0.98e-7■■■■□ 20.7
UBR4-201ENST00000375218 GLE1Q53GS7 698 aaKnown RBP9.44□□□□□ -0.9
UBR4-201ENST00000375218 TXNRD3Q86VQ6 643 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 LRRC8CQ8TDW0 803 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 GANCQ8TET4 914 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 KIFC3Q9BVG8 833 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 EVA1AQ9H8M9 152 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 MARK1Q9P0L2 795 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 TCRBV5S4A2TA0A5A2 114 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 RIMBP2O15034 1052 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 SCAMP1O15126 338 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 CBFA2T3O75081 653 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 SLITRK3O94933 977 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 GGPS1O95749 300 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 CTNNA2P26232 953 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 EIF6P56537 245 aaKnown RBP9.44□□□□□ -0.9
UBR4-201ENST00000375218 CNGA2Q16280 664 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 GRIK5Q16478 980 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 FUT11Q495W5 492 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 BORAQ6PGQ7 559 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 NELFCDQ8IXH7 590 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 TXLNBQ8N3L3 684 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 SYNPOQ8N3V7 929 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 SYT2Q8N9I0 419 aaPredicted RBP9.44□□□□□ -0.9
UBR4-201ENST00000375218 SDCCAG3Q96C92 435 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 FAM193BQ96PV7 902 aaPredicted RBP9.44□□□□□ -0.9
UBR4-201ENST00000375218 C12orf4Q9NQ89 552 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 GJB4Q9NTQ9 266 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 TLL2Q9Y6L7 1015 aa9.44□□□□□ -0.9
UBR4-201ENST00000375218 TMEM247A6NEH6 219 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 SNPHO15079 494 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 TMCC1O94876 653 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 MYZAPP0CAP1 466 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 PRR35P0CG20 571 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 AXLP30530 894 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 PSMC2P35998 433 aaKnown RBP9.43□□□□□ -0.9
UBR4-201ENST00000375218 CBX5P45973 191 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 ALDH3A2P51648 485 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 MSLNQ13421 630 aaPredicted RBP9.43□□□□□ -0.9
UBR4-201ENST00000375218 LPIN1Q14693 890 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 NECTIN1Q15223 517 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 UGP2Q16851 508 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 SLC30A9Q6PML9 568 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 LMBR1LQ6UX01 489 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 CFAP61Q8NHU2 1237 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 ART5Q96L15 291 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 NUDCD1Q96RS6 583 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 CDC6Q99741 560 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 TBC1D10AQ9BXI6 508 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 EIF2AQ9BY44 585 aaKnown RBP9.43□□□□□ -0.9
UBR4-201ENST00000375218 FRMD8P1Q9BZ68 369 aaPredicted RBP9.43□□□□□ -0.9
UBR4-201ENST00000375218 PCDH18Q9HCL0 1135 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 C11orf16Q9NQ32 467 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 SMCHD1A6NHR9 2005 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 DNAJC25-GNG10A0A024R161 153 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 H2AFYO75367 372 aaKnown RBP9.43□□□□□ -0.9
UBR4-201ENST00000375218 PLGP00747 810 aaPredicted RBP9.43□□□□□ -0.9
UBR4-201ENST00000375218 OPN1MWP04001 364 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 OPN1MW2P0DN77 364 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 OPN1MW3P0DN78 364 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 NCF1P14598 390 aaPredicted RBP9.43□□□□□ -0.9
UBR4-201ENST00000375218 NNTQ13423 1086 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 NCF4Q15080 339 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 CFAP157Q5JU67 520 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 DCLRE1AQ6PJP8 1040 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 POTEAQ6S8J7 498 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 KDM7AQ6ZMT4 941 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 SYCE1Q8N0S2 351 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 CAGE1Q8TC20 777 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 ZFAND2BQ8WV99 257 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 PTP4A1Q93096 173 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 FAM149B1Q96BN6 582 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 C18orf8Q96DM3 657 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 CAMKK2Q96RR4 588 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 RUSC1Q9BVN2 902 aa9.43□□□□□ -0.9
UBR4-201ENST00000375218 MAGEH1Q9H213 219 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms