RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 A6NJR5 290 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 MED7O43513 233 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 ATG7O95352 703 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 ZBED1O96006 694 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 ELNP15502 786 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 ANXA13P27216 316 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 ICAM3P32942 547 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 GNL1P36915 607 aaPredicted RBP11.3□□□□□ -0.6
CXCL12-203ENST00000374429 SH3D19Q5HYK7 790 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 C6orf118Q5T5N4 469 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 SDHAF4Q5VUM1 108 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 CD101Q93033 1021 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 ARHGAP39Q9C0H5 1083 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 HAUS2Q9NVX0 235 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 SLC17A6Q9P2U8 582 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 NENFQ9UMX5 172 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 TRIM33Q9UPN9 1127 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 QSER1Q2KHR3 1735 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 GLTPD2A6NH11 291 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 FSCN2O14926 492 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 TSPAN1O60635 241 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 SMIM10L2AP0DMW4 78 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 SMIM10L2BP0DMW5 78 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 GHRP10912 638 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 AMPD1P23109 780 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 PGGT1BP53609 377 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 MCL1Q07820 350 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 SIX1Q15475 284 aaPredicted RBP11.3□□□□□ -0.6
CXCL12-203ENST00000374429 HIF1AQ16665 826 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 OLFML2BQ68BL8 750 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 HIBCHQ6NVY1 386 aaPredicted RBP11.3□□□□□ -0.6
CXCL12-203ENST00000374429 TAOK1Q7L7X3 1001 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 ZNF572Q7Z3I7 529 aaPredicted RBP11.3□□□□□ -0.6
CXCL12-203ENST00000374429 KAT2BQ92831 832 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 RBM41Q96IZ5 413 aaKnown RBP11.3□□□□□ -0.6
CXCL12-203ENST00000374429 MAML3Q96JK9 1138 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 TGS1Q96RS0 853 aaKnown RBP11.3□□□□□ -0.6
CXCL12-203ENST00000374429 RPS6KL1Q9Y6S9 549 aa11.3□□□□□ -0.6
CXCL12-203ENST00000374429 C2orf71A6NGG8 1288 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 RARGP13631 454 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 RBL1P28749 1068 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 MLH1P40692 756 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 RWDD4Q6NW29 188 aaKnown RBP11.29□□□□□ -0.6
CXCL12-203ENST00000374429 TAPT1Q6NXT6 567 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 DSTYKQ6XUX3 929 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 C15orf39Q6ZRI6 1047 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 FBXO36Q8NEA4 188 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 CHMP6Q96FZ7 201 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 LRRC4Q9HBW1 653 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.29□□□□□ -0.6
CXCL12-203ENST00000374429 ZNF831Q5JPB2 1677 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 KNL1Q8NG31 2342 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 HUS1O60921 280 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 TTC4O95801 387 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 HSPA6P17066 643 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 KRT4P19013 534 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 GRIA1P42261 906 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 SLC1A1P43005 524 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 TRIM32Q13049 653 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 SCN4BQ8IWT1 228 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 TP53INP2Q8IXH6 220 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 RCOR2Q8IZ40 523 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 USP6NLQ92738 828 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 FAM81BQ96LP2 452 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 KCNK16Q96T55 309 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 PAAF1Q9BRP4 392 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 TMEM134Q9H6X4 195 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 CD248Q9HCU0 757 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 FLRT1Q9NZU1 646 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 DIS3Q9Y2L1 958 aaKnown RBP11.29□□□□□ -0.6
CXCL12-203ENST00000374429 PRG3Q9Y2Y8 225 aaPredicted RBP11.29□□□□□ -0.6
CXCL12-203ENST00000374429 A0A0G2JND7 137 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 ENO4A6NNW6 628 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 PPFIA2O75334 1257 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 B3GAT3O94766 335 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 SLC4A1P02730 911 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 ITIH2P19823 946 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 ADIGQ0VDE8 80 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 PPP2R5EQ16537 467 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 MSS51Q4VC12 460 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 MFSD4BQ5TF39 518 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 WSCD1Q658N2 575 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 PLEKHA7Q6IQ23 1121 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 CCDC125Q86Z20 511 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 UNC5BQ8IZJ1 945 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 IQCGQ9H095 443 aaKnown RBP11.29□□□□□ -0.6
CXCL12-203ENST00000374429 AAASQ9NRG9 546 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 HOMER3Q9NSC5 361 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 PCYOX1Q9UHG3 505 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.29□□□□□ -0.6
CXCL12-203ENST00000374429 PPP2R3BQ9Y5P8 575 aa11.29□□□□□ -0.6
CXCL12-203ENST00000374429 IQCA1LA6NCM1 817 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 F8W810 466 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 LIASO43766 372 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 MYBL1P10243 752 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 THPOP40225 353 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 SNRPFP62306 86 aaKnown RBP11.28□□□□□ -0.6
CXCL12-203ENST00000374429 ZBTB16Q05516 673 aa11.28□□□□□ -0.6
CXCL12-203ENST00000374429 C1QBPQ07021 282 aaKnown RBP11.28□□□□□ -0.6
CXCL12-203ENST00000374429 MPP2Q14168 576 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms