RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 DDX23Q9BUQ8 820 aaKnown RBP13.18□□□□□ -0.3
PRPF4-202ENST00000374199 SPC25Q9HBM1 224 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 PCDH9Q9HC56 1237 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 CREBZFQ9NS37 354 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 DNPEPQ9ULA0 475 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 FNDC1Q4ZHG4 1894 aaPredicted RBP13.18□□□□□ -0.3
PRPF4-202ENST00000374199 A6NNZ2 444 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 APOC4-APOC2K7ER74 178 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 APOC2P02655 101 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 HDAC4P56524 1084 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 HADHQ16836 314 aaKnown RBP13.18□□□□□ -0.3
PRPF4-202ENST00000374199 TUBB8Q3ZCM7 444 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 BHLHA9Q7RTU4 235 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 ZCCHC9Q8N567 271 aaKnown RBP13.18□□□□□ -0.3
PRPF4-202ENST00000374199 EMC1Q8N766 993 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 TTC13Q8NBP0 860 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 RXFP2Q8WXD0 754 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 RTP3Q9BQQ7 232 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 DUSP16Q9BY84 665 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 PRDM16Q9HAZ2 1276 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 GOLGA2P5Q9HBQ8 144 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 SLC12A6Q9UHW9 1150 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 COL4A6Q14031 1691 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 GOLGA6CA6NDK9 693 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 HHLA1C9JL84 531 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 HCRTO43612 131 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 GOLGA6DP0CG33 693 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 PDK2Q15119 407 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 DPYSL2Q16555 572 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 FAM102AQ5T9C2 384 aaPredicted RBP13.18□□□□□ -0.3
PRPF4-202ENST00000374199 C3orf58Q8NDZ4 430 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 TSPYL2Q9H2G4 693 aaPredicted RBP13.18□□□□□ -0.3
PRPF4-202ENST00000374199 RSAD1Q9HA92 442 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 UBN1Q9NPG3 1134 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 GOLGA6AQ9NYA3 693 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 KLK14Q9P0G3 267 aa13.18□□□□□ -0.3
PRPF4-202ENST00000374199 ABT1Q9ULW3 272 aaKnown RBP13.18□□□□□ -0.3
PRPF4-202ENST00000374199 C9IYK1 514 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 M0QZ92 97 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 NDC80O14777 642 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 ABHD2P08910 425 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 KRT10P13645 584 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 MAGEA6P43360 314 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 PLTPP55058 493 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 UBAP2Q5T6F2 1119 aaKnown RBP13.17□□□□□ -0.3
PRPF4-202ENST00000374199 RNASEH2BQ5TBB1 312 aaKnown RBP13.17□□□□□ -0.3
PRPF4-202ENST00000374199 FAM171BQ6P995 826 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 TNIP3Q96KP6 325 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 SEZ6LQ9BYH1 1024 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 CALCOCO1Q9P1Z2 691 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 DNALI1O14645 258 aaPredicted RBP13.17□□□□□ -0.3
PRPF4-202ENST00000374199 CD48P09326 243 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 IGFBP6P24592 240 aaPredicted RBP13.17□□□□□ -0.3
PRPF4-202ENST00000374199 EIF4EBP2Q13542 120 aaPredicted RBP13.17□□□□□ -0.3
PRPF4-202ENST00000374199 PTGISQ16647 500 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 SH3PXD2AQ5TCZ1 1133 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 STRADAQ7RTN6 431 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 ZFP42Q96MM3 310 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 ZNF670Q9BS34 389 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 HEMGNQ9BXL5 484 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 MTMR10Q9NXD2 777 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 MTRF1LQ9UGC7 380 aaKnown RBP13.17□□□□□ -0.3
PRPF4-202ENST00000374199 PADI3Q9ULW8 664 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 USTQ9Y2C2 406 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 A8MXQ7 604 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 GOLGA8SH3BPF8 625 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 TOMM70O94826 608 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 CETN2P41208 172 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 AFF1P51825 1210 aaKnown RBP13.17□□□□□ -0.3
PRPF4-202ENST00000374199 NOMO1Q15155 1222 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 RAB6CQ53S08 254 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 BOLA3Q53S33 107 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 PQLC3Q8N755 202 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 GLIS1Q8NBF1 620 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 FAM76AQ8TAV0 307 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 PGAP3Q96FM1 320 aaPredicted RBP13.17□□□□□ -0.3
PRPF4-202ENST00000374199 UROC1Q96N76 676 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 ROPN1BQ9BZX4 212 aaPredicted RBP13.17□□□□□ -0.3
PRPF4-202ENST00000374199 RAB6CQ9H0N0 254 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 ROPN1Q9HAT0 212 aaPredicted RBP13.17□□□□□ -0.3
PRPF4-202ENST00000374199 CRTAC1Q9NQ79 661 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 RGS18Q9NS28 235 aa13.17□□□□□ -0.3
PRPF4-202ENST00000374199 LTBP2Q14767 1821 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 PI4K2BG5E9Z4 385 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 TMEM189-UBE2V1I3L0A0 370 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 AOC2O75106 756 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 DAB1O75553 588 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 CCDC130P13994 396 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 CHKAP35790 457 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 ACLYP53396 1101 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 ITGA8P53708 1063 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 TAF5Q15542 800 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 TWF2Q6IBS0 349 aaKnown RBP13.16□□□□□ -0.3
PRPF4-202ENST00000374199 CROCCP2Q86T23 111 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 CRIPAKQ8N1N5 446 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 LPIN3Q9BQK8 851 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 SEMA4AQ9H3S1 761 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 GINS2Q9Y248 185 aa13.16□□□□□ -0.3
PRPF4-202ENST00000374199 ZNF638Q14966 1978 aaKnown RBP13.16□□□□□ -0.3
PRPF4-202ENST00000374199 SF3B1O75533 1304 aaKnown RBP eCLIP13.16□□□□□ -0.38e-6■■■■■ 107
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms