RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 GREB1Q4ZG55 1949 aa18.5■□□□□ 0.55
C9orf43-202ENST00000374165 XPO1O14980 1071 aaKnown RBP18.5■□□□□ 0.55
C9orf43-202ENST00000374165 SEC24AO95486 1093 aa18.5■□□□□ 0.55
C9orf43-202ENST00000374165 SETSIPP0DME0 302 aa18.5■□□□□ 0.55
C9orf43-202ENST00000374165 TMEM110Q86TL2 294 aa18.5■□□□□ 0.55
C9orf43-202ENST00000374165 MICAL1Q8TDZ2 1067 aa18.5■□□□□ 0.55
C9orf43-202ENST00000374165 CLEC4CQ8WTT0 213 aa18.5■□□□□ 0.55
C9orf43-202ENST00000374165 NDRG1Q92597 394 aaKnown RBP18.5■□□□□ 0.55
C9orf43-202ENST00000374165 OXCT2Q9BYC2 517 aaPredicted RBP18.5■□□□□ 0.55
C9orf43-202ENST00000374165 OSGEPQ9NPF4 335 aa18.5■□□□□ 0.55
C9orf43-202ENST00000374165 COG5Q9UP83 839 aa18.5■□□□□ 0.55
C9orf43-202ENST00000374165 COLQQ9Y215 455 aaPredicted RBP18.5■□□□□ 0.55
C9orf43-202ENST00000374165 IRAK3Q9Y616 596 aa18.5■□□□□ 0.55
C9orf43-202ENST00000374165 ZNF638Q14966 1978 aaKnown RBP18.5■□□□□ 0.55
C9orf43-202ENST00000374165 MOCS3O95396 460 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 ATF2P15336 505 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 GRIK1P39086 918 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 AMPD2Q01433 879 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 RAB33AQ14088 237 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 SCN4BQ8IWT1 228 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 TRIM58Q8NG06 486 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 GDPD5Q8WTR4 605 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 STK32AQ8WU08 396 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 TIFAQ96CG3 184 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 ZNF653Q96CK0 615 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 C18orf8Q96DM3 657 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 FUBP3Q96I24 572 aaKnown RBP eCLIP18.49■□□□□ 0.55
C9orf43-202ENST00000374165 FNIP2Q9P278 1114 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 STK39Q9UEW8 545 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 CDC23Q9UJX2 597 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 DOCK6Q96HP0 2047 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 PATJQ8NI35 1801 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 ATP1A1P05023 1023 aaKnown RBP18.49■□□□□ 0.55
C9orf43-202ENST00000374165 TMEM253P0C7T8 217 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 LCP1P13796 627 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 RPL34P49207 117 aaKnown RBP18.49■□□□□ 0.55
C9orf43-202ENST00000374165 GPC5P78333 572 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 UBE3AQ05086 875 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 C1QBPQ07021 282 aaKnown RBP18.49■□□□□ 0.55
C9orf43-202ENST00000374165 XYLT1Q86Y38 959 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 GPR65Q8IYL9 337 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 SCAMP5Q8TAC9 235 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 SLC35G2Q8TBE7 412 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 SAMD11Q96NU1 681 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 KLHL5Q96PQ7 755 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 MIS12Q9H081 205 aa18.49■□□□□ 0.55
C9orf43-202ENST00000374165 DMAP1Q9NPF5 467 aaPredicted RBP18.49■□□□□ 0.55
C9orf43-202ENST00000374165 CNOT8Q9UFF9 292 aaKnown RBP18.49■□□□□ 0.55
C9orf43-202ENST00000374165 TCRBV5S1A1TA0A578 114 aa18.48■□□□□ 0.55
C9orf43-202ENST00000374165 FSCN2O14926 492 aa18.48■□□□□ 0.55
C9orf43-202ENST00000374165 PAPSS1O43252 624 aaPredicted RBP18.48■□□□□ 0.55
C9orf43-202ENST00000374165 GABRB2P47870 512 aa18.48■□□□□ 0.55
C9orf43-202ENST00000374165 MGAT5BQ3V5L5 792 aa18.48■□□□□ 0.55
C9orf43-202ENST00000374165 MNS1Q8NEH6 495 aa18.48■□□□□ 0.55
C9orf43-202ENST00000374165 CTNNBL1Q8WYA6 563 aaPredicted RBP18.48■□□□□ 0.55
C9orf43-202ENST00000374165 VCPIP1Q96JH7 1222 aa18.48■□□□□ 0.55
C9orf43-202ENST00000374165 SEPT5Q99719 369 aaPredicted RBP18.48■□□□□ 0.55
C9orf43-202ENST00000374165 TRIM7Q9C029 511 aa18.48■□□□□ 0.55
C9orf43-202ENST00000374165 SYNCQ9H7C4 482 aa18.48■□□□□ 0.55
C9orf43-202ENST00000374165 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.48■□□□□ 0.55
C9orf43-202ENST00000374165 INTUQ9ULD6 942 aa18.48■□□□□ 0.55
C9orf43-202ENST00000374165 TGM5O43548 720 aa18.47■□□□□ 0.55
C9orf43-202ENST00000374165 BUB1O43683 1085 aa18.47■□□□□ 0.55
C9orf43-202ENST00000374165 SLC8A3P57103 927 aa18.47■□□□□ 0.55
C9orf43-202ENST00000374165 SMAD3P84022 425 aaKnown RBP18.47■□□□□ 0.55
C9orf43-202ENST00000374165 ADIGQ0VDE8 80 aa18.47■□□□□ 0.55
C9orf43-202ENST00000374165 TAF5Q15542 800 aa18.47■□□□□ 0.55
C9orf43-202ENST00000374165 RNF10Q8N5U6 811 aaKnown RBP18.47■□□□□ 0.55
C9orf43-202ENST00000374165 SPPL2BQ8TCT7 592 aa18.47■□□□□ 0.55
C9orf43-202ENST00000374165 NOX5Q96PH1 765 aa18.47■□□□□ 0.55
C9orf43-202ENST00000374165 ABCB6Q9NP58 842 aa18.47■□□□□ 0.55
C9orf43-202ENST00000374165 AFF4Q9UHB7 1163 aaKnown RBP18.47■□□□□ 0.55
C9orf43-202ENST00000374165 PRRC2BQ5JSZ5 2229 aaKnown RBP18.47■□□□□ 0.55
C9orf43-202ENST00000374165 MTCL1Q9Y4B5 1905 aaKnown RBP18.47■□□□□ 0.55
C9orf43-202ENST00000374165 TNFRSF10BO14763 440 aa18.47■□□□□ 0.55
C9orf43-202ENST00000374165 CYP1A2P05177 515 aa18.47■□□□□ 0.55
C9orf43-202ENST00000374165 HAPLN1P10915 354 aaPredicted RBP18.47■□□□□ 0.55
C9orf43-202ENST00000374165 ATF6P18850 670 aa18.47■□□□□ 0.55
C9orf43-202ENST00000374165 TKTL1P51854 596 aa18.47■□□□□ 0.55
C9orf43-202ENST00000374165 MAMLD1Q13495 774 aa18.47■□□□□ 0.55
C9orf43-202ENST00000374165 SMC1AQ14683 1233 aaKnown RBP18.47■□□□□ 0.55
C9orf43-202ENST00000374165 RAB41Q5JT25 222 aa18.47■□□□□ 0.55
C9orf43-202ENST00000374165 VSTM1Q6UX27 236 aa18.47■□□□□ 0.55
C9orf43-202ENST00000374165 FAM183BPQ6ZVS7 135 aa18.47■□□□□ 0.55
C9orf43-202ENST00000374165 KCTD13Q8WZ19 329 aa18.47■□□□□ 0.55
C9orf43-202ENST00000374165 HSFY1Q96LI6 401 aa18.47■□□□□ 0.55
C9orf43-202ENST00000374165 GOLGA8SH3BPF8 625 aa18.46■□□□□ 0.55
C9orf43-202ENST00000374165 PER2O15055 1255 aa18.46■□□□□ 0.55
C9orf43-202ENST00000374165 LPXNO60711 386 aa18.46■□□□□ 0.55
C9orf43-202ENST00000374165 MAGEA11P43364 429 aa18.46■□□□□ 0.55
C9orf43-202ENST00000374165 RPL7AP62424 266 aaKnown RBP18.46■□□□□ 0.55
C9orf43-202ENST00000374165 SMARCB1Q12824 385 aa18.46■□□□□ 0.55
C9orf43-202ENST00000374165 TUBB2AQ13885 445 aa18.46■□□□□ 0.55
C9orf43-202ENST00000374165 PAPD7Q5XG87 772 aaKnown RBP18.46■□□□□ 0.55
C9orf43-202ENST00000374165 TPGS2Q68CL5 300 aa18.46■□□□□ 0.55
C9orf43-202ENST00000374165 PLEKHA7Q6IQ23 1121 aa18.46■□□□□ 0.55
C9orf43-202ENST00000374165 LILRA6Q6PI73 481 aa18.46■□□□□ 0.55
C9orf43-202ENST00000374165 ADGRD2Q7Z7M1 963 aa18.46■□□□□ 0.55
C9orf43-202ENST00000374165 KHSRPQ92945 711 aaKnown RBP eCLIP18.46■□□□□ 0.55
C9orf43-202ENST00000374165 TUBB2BQ9BVA1 445 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms