RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 C12orf65Q9H3J6 166 aaKnown RBP11.69□□□□□ -0.54
RPRD1B-201ENST00000373433 DNAAF2Q9NVR5 837 aaKnown RBP11.69□□□□□ -0.54
RPRD1B-201ENST00000373433 RPL26L1Q9UNX3 145 aaKnown RBP11.69□□□□□ -0.54
RPRD1B-201ENST00000373433 NUMBLQ9Y6R0 609 aa11.69□□□□□ -0.54
RPRD1B-201ENST00000373433 FER1L6Q2WGJ9 1857 aa11.69□□□□□ -0.54
RPRD1B-201ENST00000373433 C2CD2LO14523 706 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 TGFB1I1O43294 461 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 GAS2O43903 313 aaKnown RBP11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 CTSHP09668 335 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 AKR1A1P14550 325 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 AMPD1P23109 780 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 SERPINB3P29508 390 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 ICAM3P32942 547 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 WDR72Q3MJ13 1102 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 PLEKHG4Q58EX7 1191 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 MDH1BQ5I0G3 518 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 TWF2Q6IBS0 349 aaKnown RBP11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 GRK7Q8WTQ7 553 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 PRR11Q96HE9 360 aaPredicted RBP11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 ANKRD36BP1Q96IX9 119 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 NSL1Q96IY1 281 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 KLF6Q99612 283 aaPredicted RBP11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 SYT11Q9BT88 431 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 MAF1Q9H063 256 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 TMEM165Q9HC07 324 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 SAR1AQ9NR31 198 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 KRT82Q9NSB4 513 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 STX18Q9P2W9 335 aaKnown RBP11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 SLC45A1Q9Y2W3 748 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 ACTL7BQ9Y614 415 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 UBE4BO95155 1302 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 A0A1W2PPM1 405 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 C2orf71A6NGG8 1288 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 CCDC160A6NGH7 325 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 TRAFD1O14545 582 aaPredicted RBP11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 ADRA1DP25100 572 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 TPP2P29144 1249 aaPredicted RBP11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 USP46P62068 366 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 SEZ6Q53EL9 994 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 ZNF484Q5JVG2 852 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 ZNF513Q8N8E2 541 aaPredicted RBP11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 ATL2Q8NHH9 583 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 MAML1Q92585 1016 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 MS4A4AQ96JQ5 239 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 ARMCX1Q9P291 453 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 ANGPTL2Q9UKU9 493 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 TISP43B9A030 160 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 HNRNPRO43390 633 aaKnown RBP11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 AOC2O75106 756 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 LYPLA2O95372 231 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 CYP1A1P04798 512 aaPredicted RBP11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 ATXN8OSP0DMR3 200 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 MFAP3P55082 362 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 MYBPC3Q14896 1274 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 KIZQ2M2Z5 673 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 LIN52Q52LA3 116 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 RINLQ6ZS11 566 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 ABRAQ8N0Z2 381 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 NMD3Q96D46 503 aaKnown RBP11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 CFAP57Q96MR6 1250 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 GPR20Q99678 358 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 APBA2Q99767 749 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 NACA2Q9H009 215 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 LNPEPQ9UIQ6 1025 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 R3HDM2Q9Y2K5 976 aaKnown RBP11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 NUB1Q9Y5A7 615 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 QSER1Q2KHR3 1735 aa11.68□□□□□ -0.54
RPRD1B-201ENST00000373433 RRN3P2A6NIE6 340 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 GOLGA8SH3BPF8 625 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 CA12O43570 354 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 USP1O94782 785 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 SGPL1O95470 568 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 SETSIPP0DME0 302 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 FGFR1P11362 822 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 KRT4P19013 534 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 ARFIP2P53365 341 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 DSG1Q02413 1049 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 LAMTOR4Q0VGL1 99 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 OLFML2BQ68BL8 750 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 KRT39Q6A163 491 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 CBWD2Q8IUF1 395 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 ST13P4Q8IZP2 240 aaPredicted RBP11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 KAT5Q92993 513 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 TRIM55Q9BYV6 548 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 ETNK2Q9NVF9 386 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 INPP5FQ9Y2H2 1132 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 ZMYM2Q9UBW7 1377 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 ATAD5Q96QE3 1844 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 A6NJR5 290 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 HNRNPCL1O60812 293 aaKnown RBP11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 ARIH2O95376 493 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 SPATA31D3P0C874 917 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 FAM200BP0CF97 657 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 IVDP26440 423 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 CAV1Q03135 178 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 PTK6Q13882 451 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 C6orf163Q5TEZ5 329 aa11.67□□□□□ -0.54
RPRD1B-201ENST00000373433 DAB2IPQ5VWQ8 1189 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms