RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 LAMP5Q9UJQ1 280 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 AJAP1Q9UKB5 411 aaPredicted RBP8.58□□□□□ -1.04
GARNL3-201ENST00000373386 ZBTB21Q9ULJ3 1066 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 STRIP2Q9ULQ0 834 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 EDARQ9UNE0 448 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 MAGED1Q9Y5V3 778 aaPredicted RBP8.58□□□□□ -1.04
GARNL3-201ENST00000373386 USH1CQ9Y6N9 552 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 NUMBLQ9Y6R0 609 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 SYNGAP1Q96PV0 1343 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 FBP2O00757 339 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 MCF2LO15068 1137 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 CTNND1O60716 968 aaKnown RBP8.58□□□□□ -1.04
GARNL3-201ENST00000373386 GDF11O95390 407 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 GNRH1P01148 92 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 ICAM1P05362 532 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 GSTA1P08263 222 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 IFNA8P32881 189 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 SERPINB4P48594 390 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 GABREP78334 506 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 JAG1P78504 1218 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 GTF2BQ00403 316 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 PRKCEQ02156 737 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 MOGSQ13724 837 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 ITIH4Q14624 930 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 SPDYE2Q495Y8 402 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 EPC2Q52LR7 807 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 HABP4Q5JVS0 413 aaKnown RBP8.58□□□□□ -1.04
GARNL3-201ENST00000373386 XRRA1Q6P2D8 792 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 DDHD1Q8NEL9 900 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 SPATA18Q8TC71 538 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 OTUD5Q96G74 571 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 GMLQ99445 158 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 CCDC28BQ9BUN5 200 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 VTA1Q9NP79 307 aa8.58□□□□□ -1.04
GARNL3-201ENST00000373386 LARSQ9P2J5 1176 aaKnown RBP8.58□□□□□ -1.04
GARNL3-201ENST00000373386 CNTNAP1P78357 1384 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 UTRNP46939 3433 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 PHF20L1A8MW92 1017 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 DCDC2CA8MYV0 355 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 XPOTO43592 962 aaKnown RBP8.57□□□□□ -1.04
GARNL3-201ENST00000373386 FARP2O94887 1054 aaPredicted RBP8.57□□□□□ -1.04
GARNL3-201ENST00000373386 FDX1P10109 184 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 GTF2H1P32780 548 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 RRP1BQ14684 758 aaKnown RBP8.57□□□□□ -1.04
GARNL3-201ENST00000373386 STILQ15468 1287 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 DENND2CQ68D51 928 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 DUPD1Q68J44 220 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 TPH2Q8IWU9 490 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 ALDH16A1Q8IZ83 802 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 CYP2W1Q8TAV3 490 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 SLC35G2Q8TBE7 412 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 SPOCK2Q92563 424 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 NLRP4Q96MN2 994 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 ACCSQ96QU6 501 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 TRIM51Q9BSJ1 452 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 ADNPQ9H2P0 1102 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 PABPC3Q9H361 631 aaKnown RBP8.57□□□□□ -1.04
GARNL3-201ENST00000373386 TBC1D22BQ9NU19 505 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 CCT8L1PA6NM43 557 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 RTCAO00442 366 aaKnown RBP8.57□□□□□ -1.04
GARNL3-201ENST00000373386 ARIH2O95376 493 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 ZBED1O96006 694 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 FYNP06241 537 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 ENO2P09104 434 aaPredicted RBP8.57□□□□□ -1.04
GARNL3-201ENST00000373386 PLS3P13797 630 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 NMT1P30419 496 aaKnown RBP8.57□□□□□ -1.04
GARNL3-201ENST00000373386 HOXA13P31271 388 aaPredicted RBP8.57□□□□□ -1.04
GARNL3-201ENST00000373386 TRIM23P36406 574 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 NCKAP1LP55160 1127 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 CYLC2Q14093 348 aaPredicted RBP8.57□□□□□ -1.04
GARNL3-201ENST00000373386 CTTNQ14247 550 aaKnown RBP8.57□□□□□ -1.04
GARNL3-201ENST00000373386 SPRED3Q2MJR0 410 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 FAM26DQ5JW98 314 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 ODR4Q5SWX8 454 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 RSBN1LQ6PCB5 846 aaPredicted RBP8.57□□□□□ -1.04
GARNL3-201ENST00000373386 FASTKD5Q7L8L6 764 aaKnown RBP8.57□□□□□ -1.04
GARNL3-201ENST00000373386 CCDC63Q8NA47 563 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 AGPAT1Q99943 283 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 HEPHQ9BQS7 1158 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 LXNQ9BS40 222 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 TMEM109Q9BVC6 243 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 CALN1Q9BXU9 219 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 STMN4Q9H169 189 aaPredicted RBP8.57□□□□□ -1.04
GARNL3-201ENST00000373386 C17orf75Q9HAS0 396 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 ZDHHC18Q9NUE0 388 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 PARP2Q9UGN5 583 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 DNAJC16Q9Y2G8 782 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 UBIAD1Q9Y5Z9 338 aa8.57□□□□□ -1.04
GARNL3-201ENST00000373386 ARHGEF35A5YM69 484 aa8.56□□□□□ -1.04
GARNL3-201ENST00000373386 EIF4E1BA6NMX2 242 aaKnown RBP8.56□□□□□ -1.04
GARNL3-201ENST00000373386 SYCE1LA8MT33 242 aa8.56□□□□□ -1.04
GARNL3-201ENST00000373386 PODXLO00592 558 aa8.56□□□□□ -1.04
GARNL3-201ENST00000373386 ADAMTS4O75173 837 aa8.56□□□□□ -1.04
GARNL3-201ENST00000373386 PDHA1P08559 390 aa8.56□□□□□ -1.04
GARNL3-201ENST00000373386 RAC2P15153 192 aa8.56□□□□□ -1.04
GARNL3-201ENST00000373386 MMP13P45452 471 aa8.56□□□□□ -1.04
GARNL3-201ENST00000373386 CACNB3P54284 484 aa8.56□□□□□ -1.04
GARNL3-201ENST00000373386 RAB15P59190 212 aa8.56□□□□□ -1.04
GARNL3-201ENST00000373386 DAB2P98082 770 aa8.56□□□□□ -1.04
GARNL3-201ENST00000373386 KDSRQ06136 332 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms