RNA–Protein interactions for RNA: ENST00000373233.7

CHD6-203, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD6, Length 10,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-203ENST00000373233 DQX1Q8TE96 717 aaKnown RBP6.84□□□□□ -1.31
CHD6-203ENST00000373233 PYROXD1Q8WU10 500 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 KCTD4Q8WVF5 259 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 MSTO1Q9BUK6 570 aa6.84□□□□□ -1.31
CHD6-203ENST00000373233 CHMP1AQ9HD42 196 aaPredicted RBP6.84□□□□□ -1.31
CHD6-203ENST00000373233 ADM5C9JUS6 153 aa6.84□□□□□ -1.32
CHD6-203ENST00000373233 GFPT2O94808 682 aa6.84□□□□□ -1.32
CHD6-203ENST00000373233 S100A6P06703 90 aa6.84□□□□□ -1.32
CHD6-203ENST00000373233 ZNF280AP59817 542 aaPredicted RBP6.84□□□□□ -1.32
CHD6-203ENST00000373233 TJAP1Q5JTD0 557 aa6.84□□□□□ -1.32
CHD6-203ENST00000373233 NLGN2Q8NFZ4 835 aa6.84□□□□□ -1.32
CHD6-203ENST00000373233 SPATA33Q96N06 139 aa6.84□□□□□ -1.32
CHD6-203ENST00000373233 PARK7Q99497 189 aaKnown RBP6.84□□□□□ -1.32
CHD6-203ENST00000373233 RXFP1Q9HBX9 757 aa6.84□□□□□ -1.32
CHD6-203ENST00000373233 CYP39A1Q9NYL5 469 aa6.84□□□□□ -1.32
CHD6-203ENST00000373233 TRIM13O60858 407 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 MED24O75448 989 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 ENO2P09104 434 aaPredicted RBP6.83□□□□□ -1.32
CHD6-203ENST00000373233 PEX3P56589 373 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 DHX34Q14147 1143 aaKnown RBP6.83□□□□□ -1.32
CHD6-203ENST00000373233 TTLL4Q14679 1199 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 SUN2Q9UH99 717 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 HAO1Q9UJM8 370 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 COQ6Q9Y2Z9 468 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 TNS1Q9HBL0 1735 aaKnown RBP6.83□□□□□ -1.32
CHD6-203ENST00000373233 A0A1W2PQC6 194 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 NR3C2P08235 984 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 SNHG28P0DPA3 235 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 CDH2P19022 906 aaPredicted RBP6.83□□□□□ -1.32
CHD6-203ENST00000373233 SAMD3Q8N6K7 520 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 ZBTB8BQ8NAP8 495 aaPredicted RBP6.83□□□□□ -1.32
CHD6-203ENST00000373233 LRRN4CLQ8ND94 238 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 GIPC3Q8TF64 312 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 CNPY3Q9BT09 278 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 EPS8L2Q9H6S3 715 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 COL4A1P02462 1669 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 RAG1P15918 1043 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 SLC34A1Q06495 639 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 BLMHQ13867 455 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 TAB1Q15750 504 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 SPANXN2Q5MJ10 180 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 SLC30A10Q6XR72 485 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 CMTM5Q96DZ9 223 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 KBTBD4Q9NVX7 518 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 RAB21Q9UL25 225 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 ASB14A6NK59 587 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 IRF6O14896 467 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 KRT1P04264 644 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 SLURP2P0DP57 97 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 VAV1P15498 845 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 IL17AQ16552 155 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 KLHL17Q6TDP4 642 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 CLVS1Q8IUQ0 354 aaPredicted RBP6.83□□□□□ -1.32
CHD6-203ENST00000373233 NT5C1BQ96P26 610 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 ANKZF1Q9H8Y5 726 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 FAM237AA0A1B0GTK4 181 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 PTPRAP18433 802 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 NT5DC1Q5TFE4 455 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 DEPDC1BQ8WUY9 529 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 BORCS5Q969J3 196 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 TAAR1Q96RJ0 339 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 NOD1Q9Y239 953 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 SMNDC1O75940 238 aaKnown RBP eCLIP6.83□□□□□ -1.32
CHD6-203ENST00000373233 CELF2O95319 508 aaKnown RBP6.83□□□□□ -1.32
CHD6-203ENST00000373233 NMT1P30419 496 aaKnown RBP6.83□□□□□ -1.32
CHD6-203ENST00000373233 MFAP3P55082 362 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 ABATP80404 500 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 PPM1KQ8N3J5 372 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 RIBC1Q8N443 379 aaPredicted RBP6.83□□□□□ -1.32
CHD6-203ENST00000373233 RASSF5Q8WWW0 418 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 TIPINQ9BVW5 301 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 AGO4Q9HCK5 861 aaKnown RBP6.83□□□□□ -1.32
CHD6-203ENST00000373233 SPAG17Q6Q759 2223 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 ATRNL1Q5VV63 1379 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 DENND3A2RUS2 1198 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 SRRM3A6NNA2 597 aaPredicted RBP6.83□□□□□ -1.32
CHD6-203ENST00000373233 ASAP2O43150 1006 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 FLT3P36888 993 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 OAZ1P54368 228 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 PRKCEQ02156 737 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 NR1I3Q14994 352 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 RNF220Q5VTB9 566 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 GPRC5AQ8NFJ5 357 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 PXMP2Q9NR77 195 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 AIPL1Q9NZN9 384 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 MROH7Q68CQ1 1323 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 FAM187AA6NFU0 413 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 PHGDHO43175 533 aaKnown RBP6.83□□□□□ -1.32
CHD6-203ENST00000373233 DAPK3O43293 454 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 MYBP10242 640 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 PTPN4P29074 926 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 PERM1Q5SV97 790 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 FRMD5Q7Z6J6 570 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 ANKRD13AQ8IZ07 590 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 CHCHD4Q8N4Q1 142 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 TBATAQ96M53 351 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 ACAT2Q9BWD1 397 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 PARVAQ9NVD7 372 aa6.83□□□□□ -1.32
CHD6-203ENST00000373233 NOS1APO75052 506 aaPredicted RBP6.83□□□□□ -1.32
CHD6-203ENST00000373233 NPTXRO95502 500 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms