RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 LEXMQ3ZCV2 418 aa17.23■□□□□ 0.35
TMEM53-203ENST00000372242 SPC24Q8NBT2 197 aa17.23■□□□□ 0.35
TMEM53-203ENST00000372242 TCEAL4Q96EI5 215 aa17.23■□□□□ 0.35
TMEM53-203ENST00000372242 NUCKS1Q9H1E3 243 aaKnown RBP17.23■□□□□ 0.35
TMEM53-203ENST00000372242 HAUS4Q9H6D7 363 aa17.23■□□□□ 0.35
TMEM53-203ENST00000372242 PNPLA8Q9NP80 782 aa17.23■□□□□ 0.35
TMEM53-203ENST00000372242 ST7Q9NRC1 585 aa17.23■□□□□ 0.35
TMEM53-203ENST00000372242 NOTCH4Q99466 2003 aa17.23■□□□□ 0.35
TMEM53-203ENST00000372242 GJA1P17302 382 aa17.22■□□□□ 0.35
TMEM53-203ENST00000372242 SMAD4Q13485 552 aaKnown RBP17.22■□□□□ 0.35
TMEM53-203ENST00000372242 CBX2Q14781 532 aaPredicted RBP17.22■□□□□ 0.35
TMEM53-203ENST00000372242 CYP26C1Q6V0L0 522 aa17.22■□□□□ 0.35
TMEM53-203ENST00000372242 GAREM2Q75VX8 874 aa17.22■□□□□ 0.35
TMEM53-203ENST00000372242 ZNF677Q86XU0 584 aa17.22■□□□□ 0.35
TMEM53-203ENST00000372242 FMNL3Q8IVF7 1028 aa17.22■□□□□ 0.35
TMEM53-203ENST00000372242 C1orf131Q8NDD1 294 aaKnown RBP17.22■□□□□ 0.35
TMEM53-203ENST00000372242 OR8K1Q8NGG5 319 aa17.22■□□□□ 0.35
TMEM53-203ENST00000372242 SUSD6Q92537 303 aa17.22■□□□□ 0.35
TMEM53-203ENST00000372242 SYN2Q92777 582 aaPredicted RBP17.22■□□□□ 0.35
TMEM53-203ENST00000372242 MYRFLQ96LU7 910 aa17.22■□□□□ 0.35
TMEM53-203ENST00000372242 CEP295NLQ96MC4 621 aa17.22■□□□□ 0.35
TMEM53-203ENST00000372242 RIPOR3Q96MK2 946 aa17.22■□□□□ 0.35
TMEM53-203ENST00000372242 PCDHB18PQ96TA0 734 aa17.22■□□□□ 0.35
TMEM53-203ENST00000372242 DNAJC7Q99615 494 aa17.22■□□□□ 0.35
TMEM53-203ENST00000372242 AGPAT1Q99943 283 aa17.22■□□□□ 0.35
TMEM53-203ENST00000372242 LHX5Q9H2C1 402 aa17.22■□□□□ 0.35
TMEM53-203ENST00000372242 POMKQ9H5K3 350 aa17.22■□□□□ 0.35
TMEM53-203ENST00000372242 WDR6Q9NNW5 1121 aaKnown RBP17.22■□□□□ 0.35
TMEM53-203ENST00000372242 SEPT11Q9NVA2 429 aaKnown RBP17.22■□□□□ 0.35
TMEM53-203ENST00000372242 UNC80Q8N2C7 3258 aa17.22■□□□□ 0.35
TMEM53-203ENST00000372242 AKR1B15C9JRZ8 316 aaPredicted RBP17.21■□□□□ 0.35
TMEM53-203ENST00000372242 PLEKP08567 350 aaPredicted RBP17.21■□□□□ 0.35
TMEM53-203ENST00000372242 YWHAQP27348 245 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 GABRR2P28476 465 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 TKTL1P51854 596 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 KIF11P52732 1056 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 MEA1Q16626 185 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 CYP4A22Q5TCH4 519 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 HGSNATQ68CP4 663 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 PDZD4Q76G19 769 aaPredicted RBP17.21■□□□□ 0.35
TMEM53-203ENST00000372242 ZNF571Q7Z3V5 609 aaPredicted RBP17.21■□□□□ 0.35
TMEM53-203ENST00000372242 ITFG1Q8TB96 612 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 TRMT2BQ96GJ1 504 aaKnown RBP17.21■□□□□ 0.35
TMEM53-203ENST00000372242 UBXN6Q9BZV1 441 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 IL21Q9HBE4 155 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 ABHD10Q9NUJ1 306 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 THEGQ9P2T0 379 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 ZNF638Q14966 1978 aaKnown RBP17.21■□□□□ 0.35
TMEM53-203ENST00000372242 A0A1W2PRU2 124 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 RTN3O95197 1032 aaPredicted RBP17.21■□□□□ 0.35
TMEM53-203ENST00000372242 LCP1P13796 627 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 CDC25BP30305 580 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 PRKCIP41743 596 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 MTHFRP42898 656 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 KCNQ1P51787 676 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 EPHA5P54756 1037 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 ADIGQ0VDE8 80 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 TAF10Q12962 218 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 PDCLQ13371 301 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 TDRD12Q587J7 1177 aaKnown RBP17.21■□□□□ 0.35
TMEM53-203ENST00000372242 RAB41Q5JT25 222 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 NAA35Q5VZE5 725 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 PTCRAQ6ISU1 281 aaPredicted RBP17.21■□□□□ 0.35
TMEM53-203ENST00000372242 WDR59Q6PJI9 974 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 TMEM150AQ86TG1 271 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 OLIG1Q8TAK6 271 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 CPA5Q8WXQ8 436 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 ING5Q8WYH8 240 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 SYT11Q9BT88 431 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 TTLL2Q9BWV7 592 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 LRRC4Q9HBW1 653 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 TJP2Q9UDY2 1190 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 CHORDC1Q9UHD1 332 aaPredicted RBP17.21■□□□□ 0.35
TMEM53-203ENST00000372242 CEP83Q9Y592 693 aa17.21■□□□□ 0.35
TMEM53-203ENST00000372242 CLUHO75153 1309 aa17.2■□□□□ 0.34
TMEM53-203ENST00000372242 SP100P23497 879 aaPredicted RBP17.2■□□□□ 0.34
TMEM53-203ENST00000372242 PGFP49763 221 aa17.2■□□□□ 0.34
TMEM53-203ENST00000372242 PRSS36Q5K4E3 855 aa17.2■□□□□ 0.34
TMEM53-203ENST00000372242 CNGA4Q8IV77 575 aa17.2■□□□□ 0.34
TMEM53-203ENST00000372242 TC2NQ8N9U0 490 aa17.2■□□□□ 0.34
TMEM53-203ENST00000372242 TMEM35BQ8NCS4 154 aa17.2■□□□□ 0.34
TMEM53-203ENST00000372242 KCTD13Q8WZ19 329 aa17.2■□□□□ 0.34
TMEM53-203ENST00000372242 NDRG1Q92597 394 aaKnown RBP17.2■□□□□ 0.34
TMEM53-203ENST00000372242 FBXO32Q969P5 355 aa17.2■□□□□ 0.34
TMEM53-203ENST00000372242 CPXM1Q96SM3 734 aa17.2■□□□□ 0.34
TMEM53-203ENST00000372242 IL37Q9NZH6 218 aa17.2■□□□□ 0.34
TMEM53-203ENST00000372242 MRPS23Q9Y3D9 190 aaKnown RBP17.2■□□□□ 0.34
TMEM53-203ENST00000372242 MOSPD3O75425 235 aa17.19■□□□□ 0.34
TMEM53-203ENST00000372242 TADA3O75528 432 aa17.19■□□□□ 0.34
TMEM53-203ENST00000372242 F11P03951 625 aa17.19■□□□□ 0.34
TMEM53-203ENST00000372242 SERPING1P05155 500 aa17.19■□□□□ 0.34
TMEM53-203ENST00000372242 USP17L7P0C7H9 530 aa17.19■□□□□ 0.34
TMEM53-203ENST00000372242 FSHRP23945 695 aa17.19■□□□□ 0.34
TMEM53-203ENST00000372242 HNRNPH3P31942 346 aaKnown RBP17.19■□□□□ 0.34
TMEM53-203ENST00000372242 MRE11P49959 708 aa17.19■□□□□ 0.34
TMEM53-203ENST00000372242 NOMO3P69849 1222 aa17.19■□□□□ 0.34
TMEM53-203ENST00000372242 STXBP5Q5T5C0 1151 aa17.19■□□□□ 0.34
TMEM53-203ENST00000372242 GET4Q7L5D6 327 aaPredicted RBP17.19■□□□□ 0.34
TMEM53-203ENST00000372242 SIX6OS1Q8N1H7 587 aa17.19■□□□□ 0.34
TMEM53-203ENST00000372242 SLC30A5Q8TAD4 765 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms