RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 FAM35AQ86V20 835 aa20.05■□□□□ 0.8
TMEM53-201ENST00000372235 TSG101Q99816 390 aa20.05■□□□□ 0.8
TMEM53-201ENST00000372235 GOLPH3LQ9H4A5 285 aa20.05■□□□□ 0.8
TMEM53-201ENST00000372235 TMEM8AQ9HCN3 771 aa20.05■□□□□ 0.8
TMEM53-201ENST00000372235 RBM12Q9NTZ6 932 aaKnown RBP20.05■□□□□ 0.8
TMEM53-201ENST00000372235 TBC1D14Q9P2M4 693 aa20.05■□□□□ 0.8
TMEM53-201ENST00000372235 MYO15AQ9UKN7 3530 aa20.04■□□□□ 0.8
TMEM53-201ENST00000372235 AKAP3O75969 853 aa20.04■□□□□ 0.8
TMEM53-201ENST00000372235 OLFM2O95897 454 aa20.04■□□□□ 0.8
TMEM53-201ENST00000372235 HLA-DRAP01903 254 aa20.04■□□□□ 0.8
TMEM53-201ENST00000372235 EPB41P11171 864 aaKnown RBP20.04■□□□□ 0.8
TMEM53-201ENST00000372235 GJA4P35212 333 aa20.04■□□□□ 0.8
TMEM53-201ENST00000372235 PPP1R2P41236 205 aa20.04■□□□□ 0.8
TMEM53-201ENST00000372235 ID4P47928 161 aa20.04■□□□□ 0.8
TMEM53-201ENST00000372235 USP46P62068 366 aa20.04■□□□□ 0.8
TMEM53-201ENST00000372235 GAS6Q14393 721 aa20.04■□□□□ 0.8
TMEM53-201ENST00000372235 EML3Q32P44 896 aa20.04■□□□□ 0.8
TMEM53-201ENST00000372235 COBLL1Q53SF7 1204 aa20.04■□□□□ 0.8
TMEM53-201ENST00000372235 SNX30Q5VWJ9 437 aa20.04■□□□□ 0.8
TMEM53-201ENST00000372235 KRT39Q6A163 491 aa20.04■□□□□ 0.8
TMEM53-201ENST00000372235 SCARA5Q6ZMJ2 495 aa20.04■□□□□ 0.8
TMEM53-201ENST00000372235 CD101Q93033 1021 aa20.04■□□□□ 0.8
TMEM53-201ENST00000372235 FBXO32Q969P5 355 aa20.04■□□□□ 0.8
TMEM53-201ENST00000372235 TIGD1Q96MW7 591 aa20.04■□□□□ 0.8
TMEM53-201ENST00000372235 SLC22A12Q96S37 553 aa20.04■□□□□ 0.8
TMEM53-201ENST00000372235 SLC8A2Q9UPR5 921 aa20.04■□□□□ 0.8
TMEM53-201ENST00000372235 MAPK8IP1Q9UQF2 711 aa20.04■□□□□ 0.8
TMEM53-201ENST00000372235 NME7Q9Y5B8 376 aa20.04■□□□□ 0.8
TMEM53-201ENST00000372235 PTPRDP23468 1912 aa20.04■□□□□ 0.8
TMEM53-201ENST00000372235 CHURC1-FNTBB4DL54 471 aa20.03■□□□□ 0.8
TMEM53-201ENST00000372235 LEFTY2O00292 366 aa20.03■□□□□ 0.8
TMEM53-201ENST00000372235 CLDN5O00501 218 aa20.03■□□□□ 0.8
TMEM53-201ENST00000372235 FOXD2O60548 495 aaPredicted RBP20.03■□□□□ 0.8
TMEM53-201ENST00000372235 AP1G2O75843 785 aa20.03■□□□□ 0.8
TMEM53-201ENST00000372235 OAS1P00973 400 aaKnown RBP20.03■□□□□ 0.8
TMEM53-201ENST00000372235 ARSAP15289 507 aa20.03■□□□□ 0.8
TMEM53-201ENST00000372235 NDST1P52848 882 aa20.03■□□□□ 0.8
TMEM53-201ENST00000372235 MCCD1P59942 119 aaPredicted RBP20.03■□□□□ 0.8
TMEM53-201ENST00000372235 INCA1Q0VD86 236 aa20.03■□□□□ 0.8
TMEM53-201ENST00000372235 PREPLQ4J6C6 727 aaPredicted RBP20.03■□□□□ 0.8
TMEM53-201ENST00000372235 HECTD3Q5T447 861 aa20.03■□□□□ 0.8
TMEM53-201ENST00000372235 LAIR1Q6GTX8 287 aa20.03■□□□□ 0.8
TMEM53-201ENST00000372235 ERMP1Q7Z2K6 904 aa20.03■□□□□ 0.8
TMEM53-201ENST00000372235 ACOT1Q86TX2 421 aa20.03■□□□□ 0.8
TMEM53-201ENST00000372235 FMR1NBQ8N0W7 255 aaPredicted RBP20.03■□□□□ 0.8
TMEM53-201ENST00000372235 CAMKK1Q8N5S9 505 aa20.03■□□□□ 0.8
TMEM53-201ENST00000372235 TTC16Q8NEE8 873 aa20.03■□□□□ 0.8
TMEM53-201ENST00000372235 ACDQ96AP0 544 aa20.03■□□□□ 0.8
TMEM53-201ENST00000372235 OTUB2Q96DC9 234 aa20.03■□□□□ 0.8
TMEM53-201ENST00000372235 NT5C1AQ9BXI3 368 aa20.03■□□□□ 0.8
TMEM53-201ENST00000372235 CSNK1G1Q9HCP0 422 aa20.03■□□□□ 0.8
TMEM53-201ENST00000372235 GREB1Q4ZG55 1949 aa20.03■□□□□ 0.8
TMEM53-201ENST00000372235 LRP3O75074 770 aa20.02■□□□□ 0.8
TMEM53-201ENST00000372235 ASPAP45381 313 aa20.02■□□□□ 0.8
TMEM53-201ENST00000372235 RAP1GAPP47736 663 aa20.02■□□□□ 0.8
TMEM53-201ENST00000372235 GALK1P51570 392 aa20.02■□□□□ 0.8
TMEM53-201ENST00000372235 SLC5A3P53794 718 aa20.02■□□□□ 0.8
TMEM53-201ENST00000372235 STIM1Q13586 685 aa20.02■□□□□ 0.8
TMEM53-201ENST00000372235 ZCWPW2Q504Y3 356 aa20.02■□□□□ 0.8
TMEM53-201ENST00000372235 ZNF658Q5TYW1 1059 aaPredicted RBP20.02■□□□□ 0.8
TMEM53-201ENST00000372235 FSTL4Q6MZW2 842 aa20.02■□□□□ 0.8
TMEM53-201ENST00000372235 Q6ZS52 159 aa20.02■□□□□ 0.8
TMEM53-201ENST00000372235 ELOA2Q8IYF1 753 aaPredicted RBP20.02■□□□□ 0.8
TMEM53-201ENST00000372235 KIAA2013Q8IYS2 634 aa20.02■□□□□ 0.8
TMEM53-201ENST00000372235 CHAMP1Q96JM3 812 aa20.02■□□□□ 0.8
TMEM53-201ENST00000372235 NIF3L1Q9GZT8 377 aa20.02■□□□□ 0.8
TMEM53-201ENST00000372235 GDPD2Q9HCC8 539 aa20.02■□□□□ 0.8
TMEM53-201ENST00000372235 PNPLA8Q9NP80 782 aa20.02■□□□□ 0.8
TMEM53-201ENST00000372235 KRT82Q9NSB4 513 aa20.02■□□□□ 0.8
TMEM53-201ENST00000372235 IL37Q9NZH6 218 aa20.02■□□□□ 0.8
TMEM53-201ENST00000372235 CPQQ9Y646 472 aa20.02■□□□□ 0.8
TMEM53-201ENST00000372235 WNT6Q9Y6F9 365 aa20.02■□□□□ 0.8
TMEM53-201ENST00000372235 PTPRZ1P23471 2315 aaPredicted RBP20.01■□□□□ 0.79
TMEM53-201ENST00000372235 E2F8A0AVK6 867 aa20.01■□□□□ 0.79
TMEM53-201ENST00000372235 FAM92AA1XBS5 289 aa20.01■□□□□ 0.79
TMEM53-201ENST00000372235 OTOL1A6NHN0 477 aaPredicted RBP20.01■□□□□ 0.79
TMEM53-201ENST00000372235 K7ESF4 209 aa20.01■□□□□ 0.79
TMEM53-201ENST00000372235 FAM200BP0CF97 657 aa20.01■□□□□ 0.79
TMEM53-201ENST00000372235 MBL2P11226 248 aaPredicted RBP20.01■□□□□ 0.79
TMEM53-201ENST00000372235 GCLMP48507 274 aa20.01■□□□□ 0.79
TMEM53-201ENST00000372235 FKBP3Q00688 224 aaKnown RBP20.01■□□□□ 0.79
TMEM53-201ENST00000372235 IFRD2Q12894 506 aaPredicted RBP20.01■□□□□ 0.79
TMEM53-201ENST00000372235 SIM2Q14190 667 aaPredicted RBP20.01■□□□□ 0.79
TMEM53-201ENST00000372235 WDR44Q5JSH3 913 aa20.01■□□□□ 0.79
TMEM53-201ENST00000372235 WDR5BQ86VZ2 330 aa20.01■□□□□ 0.79
TMEM53-201ENST00000372235 FUKQ8N0W3 1084 aa20.01■□□□□ 0.79
TMEM53-201ENST00000372235 SMARCE1Q969G3 411 aa20.01■□□□□ 0.79
TMEM53-201ENST00000372235 KCNK16Q96T55 309 aa20.01■□□□□ 0.79
TMEM53-201ENST00000372235 HNRNPABQ99729 332 aaKnown RBP20.01■□□□□ 0.79
TMEM53-201ENST00000372235 DUSP9Q99956 384 aaKnown RBP20.01■□□□□ 0.79
TMEM53-201ENST00000372235 NACA2Q9H009 215 aa20.01■□□□□ 0.79
TMEM53-201ENST00000372235 TLR8Q9NR97 1041 aaKnown RBP20.01■□□□□ 0.79
TMEM53-201ENST00000372235 FAM186AA6NE01 2351 aa20■□□□□ 0.79
TMEM53-201ENST00000372235 PRR5-ARHGAP8B1AHC4 643 aa20■□□□□ 0.79
TMEM53-201ENST00000372235 TNFRSF10BO14763 440 aa20■□□□□ 0.79
TMEM53-201ENST00000372235 SLC16A3O15427 465 aaKnown RBP20■□□□□ 0.79
TMEM53-201ENST00000372235 ADH1CP00326 375 aa20■□□□□ 0.79
TMEM53-201ENST00000372235 EIF2DP41214 584 aaKnown RBP20■□□□□ 0.79
TMEM53-201ENST00000372235 CACNA2D1P54289 1103 aa20■□□□□ 0.79
TMEM53-201ENST00000372235 ARHGAP8P85298 464 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms