RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 SNX9Q9Y5X1 595 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 hCG_1818297A0A087WSY0 165 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 RARGP13631 454 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 ITIH2P19823 946 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 CTGFP29279 349 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 PTPN7P35236 360 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 YARSP54577 528 aaKnown RBP13.43□□□□□ -0.26
GPC3-201ENST00000370818 EIF3BP55884 814 aaKnown RBP13.43□□□□□ -0.26
GPC3-201ENST00000370818 KCNJ2P63252 427 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 ANKS4BQ8N8V4 417 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 CENPTQ96BT3 561 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 SNF8Q96H20 258 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 APBA2Q99767 749 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 DDX56Q9NY93 547 aaKnown RBP13.43□□□□□ -0.26
GPC3-201ENST00000370818 PIN4Q9Y237 131 aaKnown RBP13.43□□□□□ -0.26
GPC3-201ENST00000370818 Q9Y3F1 56 aa13.43□□□□□ -0.26
GPC3-201ENST00000370818 LRRD1A4D1F6 860 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 LIASO43766 372 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 UPP2O95045 317 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 TJP3O95049 919 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 NQO1P15559 274 aaKnown RBP13.42□□□□□ -0.26
GPC3-201ENST00000370818 HOXC8P31273 242 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 CETN2P41208 172 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 COPS2P61201 443 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 ITIH4Q14624 930 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 SMTNL2Q2TAL5 461 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 KRT71Q3SY84 523 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 TFDP3Q5H9I0 405 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 RGMBQ6NW40 437 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 PRUNE1Q86TP1 453 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 TTC39CQ8N584 583 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 FAM167BQ9BTA0 163 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 AP5M1Q9H0R1 490 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 DNPEPQ9ULA0 475 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 KIAA1257Q9ULG3 409 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 RIPK2O43353 540 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 KLRC2P26717 231 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 AXLP30530 894 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 CHKAP35790 457 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 VPS41P49754 854 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 CCNG1P51959 295 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 ITGA8P53708 1063 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 FSCN1Q16658 493 aaKnown RBP13.42□□□□□ -0.26
GPC3-201ENST00000370818 FAM133BQ5BKY9 247 aaKnown RBP13.42□□□□□ -0.26
GPC3-201ENST00000370818 KCNT1Q5JUK3 1230 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 UBXN11Q5T124 520 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 C9orf57Q5W0N0 161 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 DENND2CQ68D51 928 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 LRRC52Q8N7C0 313 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 BEST2Q8NFU1 509 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 PIWIL1Q96J94 861 aaKnown RBP13.42□□□□□ -0.26
GPC3-201ENST00000370818 APOL6Q9BWW8 343 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 RNF39Q9H2S5 420 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 SCN1AP35498 2009 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 TRIP11Q15643 1979 aa13.42□□□□□ -0.26
GPC3-201ENST00000370818 ATF2P15336 505 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 ADCY8P40145 1251 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 PURAQ00577 322 aaKnown RBP13.41□□□□□ -0.26
GPC3-201ENST00000370818 ROR2Q01974 943 aaKnown RBP13.41□□□□□ -0.26
GPC3-201ENST00000370818 PKDCCQ504Y2 493 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 ANKRD20A2Q5SQ80 823 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 PPP1R26Q5T8A7 1209 aaPredicted RBP13.41□□□□□ -0.26
GPC3-201ENST00000370818 FAM102AQ5T9C2 384 aaPredicted RBP13.41□□□□□ -0.26
GPC3-201ENST00000370818 ANKRD20A1Q5TYW2 823 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 ANKRD20A3Q5VUR7 823 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 ARMC3Q5W041 872 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 TRNP1Q6NT89 227 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 DRICH1Q6PGQ1 229 aaPredicted RBP13.41□□□□□ -0.26
GPC3-201ENST00000370818 TRPM8Q7Z2W7 1104 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 ACOT1Q86TX2 421 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 GLIS1Q8NBF1 620 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 SOCS4Q8WXH5 440 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 PRCCQ92733 491 aaPredicted RBP13.41□□□□□ -0.26
GPC3-201ENST00000370818 ZWILCHQ9H900 591 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 DPPA5A6NC42 116 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 MYADML2A6NDP7 307 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 E5RJQ4 531 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 PIK3R2O00459 728 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 GNAT1P11488 350 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 SF3A3Q12874 501 aaKnown RBP eCLIP13.41□□□□□ -0.262e-9■■■■■ 30.3
GPC3-201ENST00000370818 CRHR2Q13324 411 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 SOWAHAQ2M3V2 549 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 CCDC25Q86WR0 208 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 TTC30AQ86WT1 665 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 CCDC89Q8N998 374 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 TRPV1Q8NER1 839 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 TSC22D3Q99576 134 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 TRAIPQ9BWF2 469 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 KLK14Q9P0G3 267 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 RPS6KL1Q9Y6S9 549 aa13.41□□□□□ -0.26
GPC3-201ENST00000370818 RALGAPA2Q2PPJ7 1873 aa13.4□□□□□ -0.26
GPC3-201ENST00000370818 SMIM28A0A1B0GU29 152 aa13.4□□□□□ -0.26
GPC3-201ENST00000370818 C17orf102A2RUQ5 167 aa13.4□□□□□ -0.26
GPC3-201ENST00000370818 TNPO2O14787 897 aaKnown RBP13.4□□□□□ -0.26
GPC3-201ENST00000370818 LUC7L3O95232 432 aaKnown RBP13.4□□□□□ -0.26
GPC3-201ENST00000370818 SLC10A3P09131 477 aa13.4□□□□□ -0.26
GPC3-201ENST00000370818 PSMC4P43686 418 aa13.4□□□□□ -0.26
GPC3-201ENST00000370818 CTCFP49711 727 aaPredicted RBP13.4□□□□□ -0.26
GPC3-201ENST00000370818 TAZQ16635 292 aa13.4□□□□□ -0.26
GPC3-201ENST00000370818 GOLGA7BQ2TAP0 167 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms