RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 PDZD8Q8NEN9 1154 aa16.39■□□□□ 0.21
PRPF38B-202ENST00000370022 OVCA2Q8WZ82 227 aa16.39■□□□□ 0.21
PRPF38B-202ENST00000370022 NOX5Q96PH1 765 aa16.39■□□□□ 0.21
PRPF38B-202ENST00000370022 SLITRK1Q96PX8 696 aa16.39■□□□□ 0.21
PRPF38B-202ENST00000370022 GCNAQ96QF7 691 aa16.39■□□□□ 0.21
PRPF38B-202ENST00000370022 LRRC4Q9HBW1 653 aa16.39■□□□□ 0.21
PRPF38B-202ENST00000370022 CYLDQ9NQC7 956 aa16.39■□□□□ 0.21
PRPF38B-202ENST00000370022 BZW2Q9Y6E2 419 aaKnown RBP16.39■□□□□ 0.21
PRPF38B-202ENST00000370022 FSHRP23945 695 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 CDH5P33151 784 aaPredicted RBP16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 ACADSBP45954 432 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 RPL34P49207 117 aaKnown RBP16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 KIF11P52732 1056 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 SNX16P57768 344 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 MRPS5P82675 430 aaKnown RBP16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 TFF2Q03403 129 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 TBX2Q13207 712 aaPredicted RBP16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 MTMR3Q13615 1198 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 ARID5BQ14865 1188 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 TSR1Q2NL82 804 aaKnown RBP16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 PRSS36Q5K4E3 855 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 DRC7Q8IY82 874 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 HS6ST3Q8IZP7 471 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 TMEM35BQ8NCS4 154 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 POMKQ9H5K3 350 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 GRPEL1Q9HAV7 217 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.38■□□□□ 0.212e-6■■■■■ 29.3
PRPF38B-202ENST00000370022 ZMYM5Q9UJ78 669 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 MRPS23Q9Y3D9 190 aaKnown RBP16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 USP3Q9Y6I4 520 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 NCANO14594 1321 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 SOBPA7XYQ1 873 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 ADCY5O95622 1261 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 MMEP08473 750 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 MYL4P12829 197 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 GABRR2P28476 465 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 HNRNPH3P31942 346 aaKnown RBP16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 SSTR3P32745 418 aaPredicted RBP16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 USP46P62068 366 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 KLHL30Q0D2K2 578 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 TAF3Q5VWG9 929 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 PMF1Q6P1K2 205 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 OR8K1Q8NGG5 319 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 SCAMP5Q8TAC9 235 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 FEZF2Q8TBJ5 459 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 DNAJC7Q99615 494 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 AGPAT1Q99943 283 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 PHF7Q9BWX1 381 aaPredicted RBP16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 IL21Q9HBE4 155 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 ZNF334Q9HCZ1 680 aaPredicted RBP16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 CDH22Q9UJ99 828 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 SCML2Q9UQR0 700 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 USTQ9Y2C2 406 aa16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 ZFP37Q9Y6Q3 630 aaPredicted RBP16.38■□□□□ 0.21
PRPF38B-202ENST00000370022 EYSQ5T1H1 3165 aa16.37■□□□□ 0.21
PRPF38B-202ENST00000370022 AKR1B15C9JRZ8 316 aaPredicted RBP16.37■□□□□ 0.21
PRPF38B-202ENST00000370022 TULP2O00295 520 aa16.37■□□□□ 0.21
PRPF38B-202ENST00000370022 MFAP3LO75121 409 aa16.37■□□□□ 0.21
PRPF38B-202ENST00000370022 F11P03951 625 aa16.37■□□□□ 0.21
PRPF38B-202ENST00000370022 CFHP08603 1231 aa16.37■□□□□ 0.21
PRPF38B-202ENST00000370022 NTHL1P78549 312 aa16.37■□□□□ 0.21
PRPF38B-202ENST00000370022 FMO1Q01740 532 aa16.37■□□□□ 0.21
PRPF38B-202ENST00000370022 ARHGAP15Q53QZ3 475 aa16.37■□□□□ 0.21
PRPF38B-202ENST00000370022 GAREM2Q75VX8 874 aa16.37■□□□□ 0.21
PRPF38B-202ENST00000370022 GPRIN1Q7Z2K8 1008 aa16.37■□□□□ 0.21
PRPF38B-202ENST00000370022 CCDC186Q7Z3E2 898 aa16.37■□□□□ 0.21
PRPF38B-202ENST00000370022 PASD1Q8IV76 773 aa16.37■□□□□ 0.21
PRPF38B-202ENST00000370022 SIX6OS1Q8N1H7 587 aa16.37■□□□□ 0.21
PRPF38B-202ENST00000370022 SCML4Q8N228 414 aa16.37■□□□□ 0.21
PRPF38B-202ENST00000370022 STKLD1Q8NE28 680 aa16.37■□□□□ 0.21
PRPF38B-202ENST00000370022 SLC20A1Q8WUM9 679 aa16.37■□□□□ 0.21
PRPF38B-202ENST00000370022 FBXO32Q969P5 355 aa16.37■□□□□ 0.21
PRPF38B-202ENST00000370022 SLC4A5Q9BY07 1137 aa16.37■□□□□ 0.21
PRPF38B-202ENST00000370022 CNGB3Q9NQW8 809 aa16.37■□□□□ 0.21
PRPF38B-202ENST00000370022 ZNHIT6Q9NWK9 470 aaKnown RBP16.37■□□□□ 0.21
PRPF38B-202ENST00000370022 TRPM5Q9NZQ8 1165 aa16.37■□□□□ 0.21
PRPF38B-202ENST00000370022 PATJQ8NI35 1801 aa16.37■□□□□ 0.21
PRPF38B-202ENST00000370022 FBXO21O94952 628 aa16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 CYP1A1P04798 512 aaPredicted RBP16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 SERPING1P05155 500 aa16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 CHRNB2P17787 502 aa16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 DDX6P26196 483 aaKnown RBP eCLIP16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 PSEN1P49768 467 aa16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 TKTL1P51854 596 aa16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 IFRD2Q12894 506 aaPredicted RBP16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 TAF10Q12962 218 aa16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 PDCLQ13371 301 aa16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 SLC5A9Q2M3M2 681 aa16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 E4F1Q66K89 784 aaPredicted RBP16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 PPP1R2P3Q6NXS1 205 aa16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 OTOP3Q7RTS5 596 aa16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 TMEM110Q86TL2 294 aa16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 ARHGAP18Q8N392 663 aa16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 WDTC1Q8N5D0 677 aa16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 MSANTD4Q8NCY6 345 aa16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 MIS12Q9H081 205 aa16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 ATXN3LQ9H3M9 355 aa16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 HAUS4Q9H6D7 363 aa16.36■□□□□ 0.21
PRPF38B-202ENST00000370022 ST7Q9NRC1 585 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms