RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 TMEM79Q9BSE2 394 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 REXO4Q9GZR2 422 aaKnown RBP12.88□□□□□ -0.35
HCFC1-202ENST00000369984 PIM2Q9P1W9 311 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 CRLS1Q9UJA2 301 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 SMIM31A0A1B0GVY4 71 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 GSG1L2A8MUP6 293 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.88□□□□□ -0.35
HCFC1-202ENST00000369984 GYPCP04921 128 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 THRAP10827 490 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 GTF2H1P32780 548 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 ALX1Q15699 326 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 ERAP2Q6P179 960 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 PDLIM2Q96JY6 352 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 MAN1C1Q9NR34 630 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 TRIM49D1C9J1S8 452 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 H7C1W4 665 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 SLC26A4O43511 780 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 ZNF862O60290 1169 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 ZNF682O95780 498 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 TXNP10599 105 aaKnown RBP12.88□□□□□ -0.35
HCFC1-202ENST00000369984 CALB2P22676 271 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 LDHDQ86WU2 507 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 TPCN2Q8NHX9 752 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 PI4K2AQ9BTU6 479 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 SERHL2Q9H4I8 314 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 SERHLQ9NQF3 203 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 ASB14A6NK59 587 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 NR5A2O00482 541 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 ASNA1O43681 348 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 PMPCBO75439 489 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 DDR2Q16832 855 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 TRIQKQ629K1 86 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 EPS8L3Q8TE67 593 aaKnown RBP12.88□□□□□ -0.35
HCFC1-202ENST00000369984 PIF1Q9H611 641 aa12.88□□□□□ -0.35
HCFC1-202ENST00000369984 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.88□□□□□ -0.35
HCFC1-202ENST00000369984 ALDH1A3P47895 512 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 DENND5BQ6ZUT9 1274 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 SGMS1Q86VZ5 419 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 UBASH3BQ8TF42 649 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 EXTL3O43909 919 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 FYNP06241 537 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 FNTAP49354 379 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 ITGB3BPQ13352 177 aaPredicted RBP12.87□□□□□ -0.35
HCFC1-202ENST00000369984 TTLL9Q3SXZ7 439 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 DENND1BQ6P3S1 775 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 WDCPQ9H6R7 721 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 NMRK2Q9NPI5 230 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 SCUBE2Q9NQ36 999 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 ALG6Q9Y672 507 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 COL15A1P39059 1388 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 GUCY1B2O75343 617 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 TRIM32Q13049 653 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 ZC2HC1CQ53FD0 456 aaPredicted RBP12.87□□□□□ -0.35
HCFC1-202ENST00000369984 C3orf20Q8ND61 904 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 KCNB2Q92953 911 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 HPDLQ96IR7 371 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 VCPKMTQ9H867 229 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 IGSF9BQ9UPX0 1349 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 E7ENQ6 273 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 ANXA9O76027 345 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 SUPT7LO94864 414 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 RHOBTB3O94955 611 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 SDE2Q6IQ49 451 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 BNC2Q6ZN30 1099 aaPredicted RBP12.87□□□□□ -0.35
HCFC1-202ENST00000369984 KATNAL1Q9BW62 490 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 DCLRE1BQ9H816 532 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 NDUFA13Q9P0J0 144 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 POU1F1P28069 291 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 OASLQ15646 514 aaKnown RBP12.87□□□□□ -0.35
HCFC1-202ENST00000369984 MGAT5BQ3V5L5 792 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 TDRD5Q8NAT2 981 aaKnown RBP12.87□□□□□ -0.35
HCFC1-202ENST00000369984 BLOC1S5Q8TDH9 187 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 KCTD14Q9BQ13 255 aaPredicted RBP12.87□□□□□ -0.35
HCFC1-202ENST00000369984 ATF5Q9Y2D1 282 aaPredicted RBP12.87□□□□□ -0.35
HCFC1-202ENST00000369984 RPS6KL1Q9Y6S9 549 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 CCNG1P51959 295 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 ATP1A4Q13733 1029 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 KLHL12Q53G59 568 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 SLC25A24Q6NUK1 477 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 OLFM1Q99784 485 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 FAM25AB3EWG3 89 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 FAM25CB3EWG5 89 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 FAM25GB3EWG6 89 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 AKR1D1P51857 326 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 CSNK2BP67870 215 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 EFHC1Q5JVL4 640 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 KDM7AQ6ZMT4 941 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 KCNH4Q9UQ05 1017 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 CEP170Q5SW79 1584 aa12.87□□□□□ -0.35
HCFC1-202ENST00000369984 KANSL1LA0AUZ9 987 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 SNAP23O00161 211 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 TPD52L2O43399 206 aaKnown RBP12.86□□□□□ -0.35
HCFC1-202ENST00000369984 ATP6V1C1P21283 382 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 C10orf120Q5SQS8 335 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 IER5Q5VY09 327 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 RMI1Q9H9A7 625 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 PADI4Q9UM07 663 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 TRIM43BA6NCK2 446 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 NDUFB5O43674 189 aa12.86□□□□□ -0.35
HCFC1-202ENST00000369984 CNOT3O75175 753 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms