RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 CFAP58Q5T655 872 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 ZNF697Q5TEC3 545 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 MFSD4BQ5TF39 518 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 NCAPH2Q6IBW4 605 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 HIBCHQ6NVY1 386 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-204ENST00000369530 ANKRD54Q6NXT1 300 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 FAM171BQ6P995 826 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.25□□□□□ -1.251e-6■■■■■ 34.7
CSDE1-204ENST00000369530 MCPH1Q8NEM0 835 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 PIGOQ8TEQ8 1089 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 PSPC1Q8WXF1 523 aaKnown RBP7.25□□□□□ -1.25
CSDE1-204ENST00000369530 CALML4Q96GE6 196 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 CRISPLD1Q9H336 500 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 RETREG1Q9H6L5 497 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 PLCB1Q9NQ66 1216 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 ADAM22Q9P0K1 906 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 PAIP2BQ9ULR5 123 aaKnown RBP7.25□□□□□ -1.25
CSDE1-204ENST00000369530 TMEM110-MUSTN1A8MSY1 372 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 GTPBP6O43824 516 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-204ENST00000369530 RHOBTB3O94955 611 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 OLFM2O95897 454 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 SOD2P04179 222 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 ASIC1P78348 528 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 SLC7A5Q01650 507 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 KLC1Q07866 573 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 PAK2Q13177 524 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 TMEM110Q86TL2 294 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 LRRC49Q8IUZ0 686 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 RIN3Q8TB24 985 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 ZNF317Q96PQ6 595 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-204ENST00000369530 DESI2Q9BSY9 194 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 POLR3FQ9H1D9 316 aaPredicted RBP7.25□□□□□ -1.25
CSDE1-204ENST00000369530 MAGEF1Q9HAY2 307 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 UBN1Q9NPG3 1134 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 MTRRQ9UBK8 725 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 BAIAP2L1Q9UHR4 511 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 MAN1B1Q9UKM7 699 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 TBX20Q9UMR3 447 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 NFS1Q9Y697 457 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 SAR1BQ9Y6B6 198 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 LRRK1Q38SD2 2015 aa7.25□□□□□ -1.25
CSDE1-204ENST00000369530 TPPPO94811 219 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 HSPA9P38646 679 aaKnown RBP7.24□□□□□ -1.25
CSDE1-204ENST00000369530 SEC24CP53992 1094 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 SPDYCQ5MJ68 293 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 SPATA1Q5VX52 437 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 ZNF554Q86TJ5 538 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 VCXQ9H320 206 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 HAUS4Q9H6D7 363 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 PDP2Q9P2J9 529 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 ZNF292O60281 2723 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 CARNS1A5YM72 827 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 PLA2G4BP0C869 781 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 CCNB1P14635 433 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 HOXD12P35452 270 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 CCT6AP40227 531 aaKnown RBP7.24□□□□□ -1.25
CSDE1-204ENST00000369530 GKAP1Q5VSY0 366 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-204ENST00000369530 MAML2Q8IZL2 1156 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-204ENST00000369530 KLHL5Q96PQ7 755 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 RUFY1Q96T51 708 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 SH2D3AQ9BRG2 576 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 PRDM12Q9H4Q4 367 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 TMEM30AQ9NV96 361 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 PRMT7Q9NVM4 692 aaPredicted RBP7.24□□□□□ -1.25
CSDE1-204ENST00000369530 RMND1Q9NWS8 449 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 CTNND2Q9UQB3 1225 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 COQ4Q9Y3A0 265 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 HHLA1C9JL84 531 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 FGF18O76093 207 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 PDGFRBP09619 1106 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 MYBP10242 640 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 VARSP26640 1264 aaKnown RBP7.24□□□□□ -1.25
CSDE1-204ENST00000369530 NCALDP61601 193 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 GOLGA8FQ08AF8 430 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 GOLGA8DPQ0D2H9 430 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 GSTA3Q16772 222 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 PARP6Q2NL67 630 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 KIAA1841Q6NSI8 718 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 NEPROQ6NW34 567 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 DEFB128Q7Z7B8 93 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 CABP7Q86V35 215 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 CNGA4Q8IV77 575 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 ZNF276Q8N554 614 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 GATA6Q92908 595 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 RAB34Q9BZG1 259 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 MIS12Q9H081 205 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 NSUN3Q9H649 340 aaKnown RBP7.24□□□□□ -1.25
CSDE1-204ENST00000369530 INIPQ9NRY2 104 aa7.24□□□□□ -1.25
CSDE1-204ENST00000369530 DDX43Q9NXZ2 648 aaKnown RBP7.24□□□□□ -1.25
CSDE1-204ENST00000369530 A0A0U1RQJ8 604 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 TMEM247A6NEH6 219 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 NRP1O14786 923 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 GFPT2O94808 682 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 VNN1O95497 513 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 RARAP10276 462 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 ACTN1P12814 892 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 CALB2P22676 271 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 RAB15P59190 212 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 TAF11Q15544 211 aa7.23□□□□□ -1.25
CSDE1-204ENST00000369530 PKDCCQ504Y2 493 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms