RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 TTC17Q96AE7 1141 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 SERAC1Q96JX3 654 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 PI4K2AQ9BTU6 479 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 ALG13Q9NP73 1137 aaKnown RBP18.18■□□□□ 0.5
CHTOP-203ENST00000368690 CHCHD3Q9NX63 227 aaKnown RBP18.18■□□□□ 0.5
CHTOP-203ENST00000368690 IKBKGQ9Y6K9 419 aa18.18■□□□□ 0.5
CHTOP-203ENST00000368690 MYH9P35579 1960 aaKnown RBP18.18■□□□□ 0.5
CHTOP-203ENST00000368690 POLR2AP24928 1970 aaKnown RBP18.17■□□□□ 0.5
CHTOP-203ENST00000368690 DHX15O43143 795 aaKnown RBP18.17■□□□□ 0.5
CHTOP-203ENST00000368690 GARTP22102 1010 aa18.17■□□□□ 0.5
CHTOP-203ENST00000368690 YWHABP31946 246 aaKnown RBP18.17■□□□□ 0.5
CHTOP-203ENST00000368690 CLCN2P51788 898 aa18.17■□□□□ 0.5
CHTOP-203ENST00000368690 MAP3K21Q5TCX8 1036 aa18.17■□□□□ 0.5
CHTOP-203ENST00000368690 SULF1Q8IWU6 871 aa18.17■□□□□ 0.5
CHTOP-203ENST00000368690 C4orf19Q8IY42 314 aa18.17■□□□□ 0.5
CHTOP-203ENST00000368690 SPIRE2Q8WWL2 714 aa18.17■□□□□ 0.5
CHTOP-203ENST00000368690 KLF6Q99612 283 aaPredicted RBP18.17■□□□□ 0.5
CHTOP-203ENST00000368690 CCDC106Q9BWC9 280 aa18.17■□□□□ 0.5
CHTOP-203ENST00000368690 S100A14Q9HCY8 104 aa18.17■□□□□ 0.5
CHTOP-203ENST00000368690 KLHL11Q9NVR0 708 aa18.17■□□□□ 0.5
CHTOP-203ENST00000368690 MKS1Q9NXB0 559 aa18.17■□□□□ 0.5
CHTOP-203ENST00000368690 IVNS1ABPQ9Y6Y0 642 aa18.17■□□□□ 0.5
CHTOP-203ENST00000368690 GOLGA8SH3BPF8 625 aa18.17■□□□□ 0.5
CHTOP-203ENST00000368690 GOLGA8MH3BSY2 632 aa18.17■□□□□ 0.5
CHTOP-203ENST00000368690 IFNB1P01574 187 aa18.17■□□□□ 0.5
CHTOP-203ENST00000368690 UBXN2AP68543 259 aa18.17■□□□□ 0.5
CHTOP-203ENST00000368690 TAP1Q03518 808 aa18.17■□□□□ 0.5
CHTOP-203ENST00000368690 MED21Q13503 144 aa18.17■□□□□ 0.5
CHTOP-203ENST00000368690 ANKRD22Q5VYY1 191 aa18.17■□□□□ 0.5
CHTOP-203ENST00000368690 DHDDSQ86SQ9 333 aa18.17■□□□□ 0.5
CHTOP-203ENST00000368690 NIPA2Q8N8Q9 360 aa18.17■□□□□ 0.5
CHTOP-203ENST00000368690 LBHD1Q9BQE6 289 aaPredicted RBP18.17■□□□□ 0.5
CHTOP-203ENST00000368690 NTPCRQ9BSD7 190 aaKnown RBP18.17■□□□□ 0.5
CHTOP-203ENST00000368690 THTPAQ9BU02 230 aa18.17■□□□□ 0.5
CHTOP-203ENST00000368690 PPM1HQ9ULR3 514 aa18.17■□□□□ 0.5
CHTOP-203ENST00000368690 SERPINA6P08185 405 aa18.16■□□□□ 0.5
CHTOP-203ENST00000368690 UQCRBP14927 111 aa18.16■□□□□ 0.5
CHTOP-203ENST00000368690 CPA2P48052 419 aa18.16■□□□□ 0.5
CHTOP-203ENST00000368690 ZNF200P98182 395 aaPredicted RBP18.16■□□□□ 0.5
CHTOP-203ENST00000368690 PLCB3Q01970 1234 aa18.16■□□□□ 0.5
CHTOP-203ENST00000368690 PIGHQ14442 188 aaPredicted RBP18.16■□□□□ 0.5
CHTOP-203ENST00000368690 HSF5Q4G112 596 aaPredicted RBP18.16■□□□□ 0.5
CHTOP-203ENST00000368690 BRDTQ58F21 947 aaPredicted RBP18.16■□□□□ 0.5
CHTOP-203ENST00000368690 SH2D4BQ5SQS7 431 aa18.16■□□□□ 0.5
CHTOP-203ENST00000368690 ZFYVE27Q5T4F4 411 aa18.16■□□□□ 0.5
CHTOP-203ENST00000368690 POLNQ7Z5Q5 900 aa18.16■□□□□ 0.5
CHTOP-203ENST00000368690 TTC1Q99614 292 aa18.16■□□□□ 0.5
CHTOP-203ENST00000368690 SIKE1Q9BRV8 207 aa18.16■□□□□ 0.5
CHTOP-203ENST00000368690 EBF3Q9H4W6 596 aa18.16■□□□□ 0.5
CHTOP-203ENST00000368690 PNPLA8Q9NP80 782 aa18.16■□□□□ 0.5
CHTOP-203ENST00000368690 ANKEF1Q9NU02 776 aa18.16■□□□□ 0.5
CHTOP-203ENST00000368690 PPARGC1AQ9UBK2 798 aaKnown RBP18.16■□□□□ 0.5
CHTOP-203ENST00000368690 GMEB1Q9Y692 573 aa18.16■□□□□ 0.5
CHTOP-203ENST00000368690 C2orf71A6NGG8 1288 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 ADM5C9JUS6 153 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 BAG2O95816 211 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 INHBAP08476 426 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 ITGB5P18084 799 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 AOC1P19801 751 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 MMP8P22894 467 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 NPTX2P47972 431 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 DMP1Q13316 513 aaPredicted RBP18.15■□□□□ 0.5
CHTOP-203ENST00000368690 ZACNQ401N2 412 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 SLC39A4Q6P5W5 647 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 RASSF3Q86WH2 238 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 POMGNT1Q8WZA1 660 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 JADE3Q92613 823 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 LMCD1Q9NZU5 365 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 SIRPGQ9P1W8 387 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 CIDEBQ9UHD4 219 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 SOX13Q9UN79 622 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 TCRBV5S1A1TA0A578 114 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 BTBD19C9JJ37 291 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 E5RJQ4 531 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 CALB1P05937 261 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 PYGBP11216 843 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 GNA15P30679 374 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 ZNF252P-AS1Q0IIN9 211 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 SUPT20HL1Q3ZLR7 823 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 PLA2G4FQ68DD2 849 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 FBXO27Q8NI29 283 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 HIC2Q96JB3 615 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 SRPK1Q96SB4 655 aaKnown RBP18.15■□□□□ 0.5
CHTOP-203ENST00000368690 IQCGQ9H095 443 aaKnown RBP18.15■□□□□ 0.5
CHTOP-203ENST00000368690 PICK1Q9NRD5 415 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 KCNH7Q9NS40 1196 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 ZNF180Q9UJW8 692 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 PPP2R3BQ9Y5P8 575 aa18.15■□□□□ 0.5
CHTOP-203ENST00000368690 DDX39AO00148 427 aaKnown RBP18.14■□□□□ 0.49
CHTOP-203ENST00000368690 COPEO14579 308 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 CCNT2O60583 730 aaKnown RBP18.14■□□□□ 0.49
CHTOP-203ENST00000368690 VAV1P15498 845 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 TCF4P15884 667 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 EPHX2P34913 555 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 RPL22P35268 128 aaKnown RBP18.14■□□□□ 0.49
CHTOP-203ENST00000368690 RGS2P41220 211 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 IRX4P78413 519 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 GAD2Q05329 585 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 FAAP100Q0VG06 881 aa18.14■□□□□ 0.49
CHTOP-203ENST00000368690 CFAP157Q5JU67 520 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms