RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 NELL2Q99435 816 aa10.45□□□□□ -0.74
CD48-202ENST00000368046 PRRX2Q99811 253 aa10.45□□□□□ -0.74
CD48-202ENST00000368046 DMAP1Q9NPF5 467 aaPredicted RBP10.45□□□□□ -0.74
CD48-202ENST00000368046 ARHGEF3Q9NR81 526 aa10.45□□□□□ -0.74
CD48-202ENST00000368046 TDP1Q9NUW8 608 aa10.45□□□□□ -0.74
CD48-202ENST00000368046 TMEM30AQ9NV96 361 aa10.45□□□□□ -0.74
CD48-202ENST00000368046 THG1LQ9NWX6 298 aaKnown RBP10.45□□□□□ -0.74
CD48-202ENST00000368046 HMGXB4Q9UGU5 601 aa10.45□□□□□ -0.74
CD48-202ENST00000368046 DACH1Q9UI36 760 aa10.45□□□□□ -0.74
CD48-202ENST00000368046 ZNF840PA6NDX5 716 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 TADA3O75528 432 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 BEST1O76090 585 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 AFPP02771 609 aaKnown RBP10.44□□□□□ -0.74
CD48-202ENST00000368046 USP17L7P0C7H9 530 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 CCDC130P13994 396 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 GLULP15104 373 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 PFKLP17858 780 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 AOC1P19801 751 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 TBXAS1P24557 533 aaPredicted RBP10.44□□□□□ -0.74
CD48-202ENST00000368046 PDE6CP51160 858 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 RAD23BP54727 409 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 MLLT6P55198 1093 aaPredicted RBP10.44□□□□□ -0.74
CD48-202ENST00000368046 MAP3K7CLP57077 242 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 YWHAEP62258 255 aaKnown RBP10.44□□□□□ -0.74
CD48-202ENST00000368046 LRMPQ12912 555 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 TAF10Q12962 218 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 ZNF268Q14587 947 aaPredicted RBP10.44□□□□□ -0.74
CD48-202ENST00000368046 MLF2Q15773 248 aaPredicted RBP10.44□□□□□ -0.74
CD48-202ENST00000368046 TPD52L1Q16890 204 aaPredicted RBP10.44□□□□□ -0.74
CD48-202ENST00000368046 ARHGAP29Q52LW3 1261 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 IRF2BP1Q8IU81 584 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 CREBRFQ8IUR6 639 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 SLC4A11Q8NBS3 891 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 PDZD8Q8NEN9 1154 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 LMO3Q8TAP4 145 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 BPIFB1Q8TDL5 484 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 OVCA2Q8WZ82 227 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 USP13Q92995 863 aaPredicted RBP10.44□□□□□ -0.74
CD48-202ENST00000368046 SLITRK1Q96PX8 696 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 SMOQ99835 787 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 DDX23Q9BUQ8 820 aaKnown RBP10.44□□□□□ -0.74
CD48-202ENST00000368046 UBXN6Q9BZV1 441 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 KIF9Q9HAQ2 790 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 FAM49BQ9NUQ9 324 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 GCNT4Q9P109 453 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 CHORDC1Q9UHD1 332 aaPredicted RBP10.44□□□□□ -0.74
CD48-202ENST00000368046 KIAA1257Q9ULG3 409 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 SIT1Q9Y3P8 196 aa10.44□□□□□ -0.74
CD48-202ENST00000368046 TECTAO75443 2155 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 DOCK6Q96HP0 2047 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 TRAV19A0A0A6YYK7 116 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 KANSL1LA0AUZ9 987 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 FAM92AA1XBS5 289 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 C2orf78A6NCI8 922 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 MAN2B1O00754 1011 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 FAM200BP0CF97 657 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 RFX1P22670 979 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 ADORA2BP29275 332 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 VCPP55072 806 aaKnown RBP10.43□□□□□ -0.74
CD48-202ENST00000368046 PLCB2Q00722 1185 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 DPCR1Q3MIW9 517 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 PPP1R26Q5T8A7 1209 aaPredicted RBP10.43□□□□□ -0.74
CD48-202ENST00000368046 SNX30Q5VWJ9 437 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 CWF19L1Q69YN2 538 aaKnown RBP10.43□□□□□ -0.74
CD48-202ENST00000368046 ZNF852Q6ZMS4 543 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 RBM43Q6ZSC3 357 aaKnown RBP10.43□□□□□ -0.74
CD48-202ENST00000368046 CLEC20AQ6ZU45 233 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 ARL14EPQ8N8R7 260 aaPredicted RBP10.43□□□□□ -0.74
CD48-202ENST00000368046 TMEM105Q8N8V8 129 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 ZMIZ2Q8NF64 920 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 SCAMP5Q8TAC9 235 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 CSGALNACT1Q8TDX6 532 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 NT5C1BQ96P26 610 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 ARID3AQ99856 593 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 DUSP16Q9BY84 665 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 OSBPL6Q9BZF3 934 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 SMG9Q9H0W8 520 aaKnown RBP10.43□□□□□ -0.74
CD48-202ENST00000368046 FBXO44Q9H4M3 255 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 THAP9Q9H5L6 903 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 TBC1D17Q9HA65 648 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 TRPC7Q9HCX4 862 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 PNPLA8Q9NP80 782 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 HEBP1Q9NRV9 189 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 GKN1Q9NS71 199 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 RAPGEFL1Q9UHV5 662 aa10.43□□□□□ -0.74
CD48-202ENST00000368046 NCANO14594 1321 aa10.42□□□□□ -0.74
CD48-202ENST00000368046 DOCK8Q8NF50 2099 aa10.42□□□□□ -0.74
CD48-202ENST00000368046 ARNTLO00327 626 aa10.42□□□□□ -0.74
CD48-202ENST00000368046 NCAM2O15394 837 aa10.42□□□□□ -0.74
CD48-202ENST00000368046 PRAMEF12O95522 483 aa10.42□□□□□ -0.74
CD48-202ENST00000368046 MBD3O95983 291 aa10.42□□□□□ -0.74
CD48-202ENST00000368046 ABL1P00519 1130 aa10.42□□□□□ -0.74
CD48-202ENST00000368046 CKMP06732 381 aa10.42□□□□□ -0.74
CD48-202ENST00000368046 VDRP11473 427 aa10.42□□□□□ -0.74
CD48-202ENST00000368046 PRKCSHP14314 528 aaPredicted RBP10.42□□□□□ -0.74
CD48-202ENST00000368046 CD72P21854 359 aa10.42□□□□□ -0.74
CD48-202ENST00000368046 SLC5A3P53794 718 aa10.42□□□□□ -0.74
CD48-202ENST00000368046 GCNT1Q02742 428 aa10.42□□□□□ -0.74
CD48-202ENST00000368046 IFRD2Q12894 506 aaPredicted RBP10.42□□□□□ -0.74
CD48-202ENST00000368046 ARHGAP17Q68EM7 881 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms