RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 SMARCD1Q96GM5 515 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 SLC22A12Q96S37 553 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 SMOQ99835 787 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 CRACR2AQ9BSW2 395 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 NT5C1AQ9BXI3 368 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 INTS2Q9H0H0 1204 aaKnown RBP15.55■□□□□ 0.08
SF3B5-201ENST00000367569 CYP3A43Q9HB55 503 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 FBXO4Q9UKT5 387 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 CCL26Q9Y258 94 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 COQ4Q9Y3A0 265 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 CACNA1AO00555 2505 aa15.54■□□□□ 0.08
SF3B5-201ENST00000367569 C2orf78A6NCI8 922 aa15.54■□□□□ 0.08
SF3B5-201ENST00000367569 HEPACAM2A8MVW5 462 aa15.54■□□□□ 0.08
SF3B5-201ENST00000367569 TRIM66O15016 1216 aa15.54■□□□□ 0.08
SF3B5-201ENST00000367569 ABL1P00519 1130 aa15.54■□□□□ 0.08
SF3B5-201ENST00000367569 PSMC3P17980 439 aa15.54■□□□□ 0.08
SF3B5-201ENST00000367569 MAGEA9P43362 315 aa15.54■□□□□ 0.08
SF3B5-201ENST00000367569 ID4P47928 161 aa15.54■□□□□ 0.08
SF3B5-201ENST00000367569 CCDC183Q5T5S1 534 aa15.54■□□□□ 0.08
SF3B5-201ENST00000367569 CAVIN1Q6NZI2 390 aaKnown RBP15.54■□□□□ 0.08
SF3B5-201ENST00000367569 GJB7Q6PEY0 223 aa15.54■□□□□ 0.08
SF3B5-201ENST00000367569 FOXR2Q6PJQ5 311 aa15.54■□□□□ 0.08
SF3B5-201ENST00000367569 DENND5BQ6ZUT9 1274 aa15.54■□□□□ 0.08
SF3B5-201ENST00000367569 UNC93AQ86WB7 457 aa15.54■□□□□ 0.08
SF3B5-201ENST00000367569 ARID3BQ8IVW6 561 aaPredicted RBP15.54■□□□□ 0.08
SF3B5-201ENST00000367569 DCLK2Q8N568 766 aa15.54■□□□□ 0.08
SF3B5-201ENST00000367569 SCAMP5Q8TAC9 235 aa15.54■□□□□ 0.08
SF3B5-201ENST00000367569 TTC8Q8TAM2 541 aa15.54■□□□□ 0.08
SF3B5-201ENST00000367569 RIN3Q8TB24 985 aa15.54■□□□□ 0.08
SF3B5-201ENST00000367569 IRF7Q92985 503 aa15.54■□□□□ 0.08
SF3B5-201ENST00000367569 ZFYVE19Q96K21 471 aa15.54■□□□□ 0.08
SF3B5-201ENST00000367569 NT5C1BQ96P26 610 aa15.54■□□□□ 0.08
SF3B5-201ENST00000367569 SLC46A2Q9BY10 475 aa15.54■□□□□ 0.08
SF3B5-201ENST00000367569 TRPV4Q9HBA0 871 aa15.54■□□□□ 0.08
SF3B5-201ENST00000367569 DMAP1Q9NPF5 467 aaPredicted RBP15.54■□□□□ 0.08
SF3B5-201ENST00000367569 SAMSN1Q9NSI8 373 aaKnown RBP15.54■□□□□ 0.08
SF3B5-201ENST00000367569 GCNT4Q9P109 453 aa15.54■□□□□ 0.08
SF3B5-201ENST00000367569 DMXL1Q9Y485 3027 aa15.54■□□□□ 0.08
SF3B5-201ENST00000367569 SCAMP3O14828 347 aaKnown RBP15.53■□□□□ 0.08
SF3B5-201ENST00000367569 NCAM2O15394 837 aa15.53■□□□□ 0.08
SF3B5-201ENST00000367569 GNA14O95837 355 aa15.53■□□□□ 0.08
SF3B5-201ENST00000367569 RPS9P46781 194 aaKnown RBP15.53■□□□□ 0.08
SF3B5-201ENST00000367569 SLC5A3P53794 718 aa15.53■□□□□ 0.08
SF3B5-201ENST00000367569 RAD23BP54727 409 aa15.53■□□□□ 0.08
SF3B5-201ENST00000367569 MARSP56192 900 aaKnown RBP15.53■□□□□ 0.08
SF3B5-201ENST00000367569 PPP1R26Q5T8A7 1209 aaPredicted RBP15.53■□□□□ 0.08
SF3B5-201ENST00000367569 TSSK4Q6SA08 328 aa15.53■□□□□ 0.08
SF3B5-201ENST00000367569 RBM43Q6ZSC3 357 aaKnown RBP15.53■□□□□ 0.08
SF3B5-201ENST00000367569 MFSD6LQ8IWD5 586 aa15.53■□□□□ 0.08
SF3B5-201ENST00000367569 KIAA2013Q8IYS2 634 aa15.53■□□□□ 0.08
SF3B5-201ENST00000367569 SLC4A11Q8NBS3 891 aa15.53■□□□□ 0.08
SF3B5-201ENST00000367569 LMO3Q8TAP4 145 aa15.53■□□□□ 0.08
SF3B5-201ENST00000367569 MRPS31Q92665 395 aaKnown RBP15.53■□□□□ 0.08
SF3B5-201ENST00000367569 TRMT2BQ96GJ1 504 aaKnown RBP15.53■□□□□ 0.08
SF3B5-201ENST00000367569 C8orf48Q96LL4 319 aa15.53■□□□□ 0.08
SF3B5-201ENST00000367569 HEXIM2Q96MH2 286 aaKnown RBP15.53■□□□□ 0.08
SF3B5-201ENST00000367569 LRRC3BQ96PB8 259 aa15.53■□□□□ 0.08
SF3B5-201ENST00000367569 CYP2S1Q96SQ9 504 aa15.53■□□□□ 0.08
SF3B5-201ENST00000367569 TASP1Q9H6P5 420 aa15.53■□□□□ 0.08
SF3B5-201ENST00000367569 TRPV5Q9NQA5 729 aa15.53■□□□□ 0.08
SF3B5-201ENST00000367569 DACH1Q9UI36 760 aa15.53■□□□□ 0.08
SF3B5-201ENST00000367569 NDRG2Q9UN36 371 aaKnown RBP15.53■□□□□ 0.08
SF3B5-201ENST00000367569 MRPS17Q9Y2R5 130 aaKnown RBP15.53■□□□□ 0.08
SF3B5-201ENST00000367569 PES1O00541 588 aaKnown RBP15.52■□□□□ 0.08
SF3B5-201ENST00000367569 MAN2B1O00754 1011 aa15.52■□□□□ 0.08
SF3B5-201ENST00000367569 FGFR1OPO95684 399 aaKnown RBP15.52■□□□□ 0.08
SF3B5-201ENST00000367569 FGF19O95750 216 aa15.52■□□□□ 0.08
SF3B5-201ENST00000367569 FAM163BP0C2L3 166 aa15.52■□□□□ 0.08
SF3B5-201ENST00000367569 FAM200BP0CF97 657 aa15.52■□□□□ 0.08
SF3B5-201ENST00000367569 CD19P15391 556 aa15.52■□□□□ 0.08
SF3B5-201ENST00000367569 TAF10Q12962 218 aa15.52■□□□□ 0.08
SF3B5-201ENST00000367569 MTAPQ13126 283 aa15.52■□□□□ 0.08
SF3B5-201ENST00000367569 GOLGA7BQ2TAP0 167 aa15.52■□□□□ 0.08
SF3B5-201ENST00000367569 SASS6Q6UVJ0 657 aa15.52■□□□□ 0.08
SF3B5-201ENST00000367569 CLEC20AQ6ZU45 233 aa15.52■□□□□ 0.08
SF3B5-201ENST00000367569 CRYBG2Q8N1P7 616 aa15.52■□□□□ 0.08
SF3B5-201ENST00000367569 UBR7Q8N806 425 aa15.52■□□□□ 0.08
SF3B5-201ENST00000367569 DEPDC1BQ8WUY9 529 aa15.52■□□□□ 0.08
SF3B5-201ENST00000367569 RUBCNQ92622 972 aa15.52■□□□□ 0.08
SF3B5-201ENST00000367569 NELL1Q92832 810 aa15.52■□□□□ 0.08
SF3B5-201ENST00000367569 CYFIP2Q96F07 1278 aa15.52■□□□□ 0.08
SF3B5-201ENST00000367569 SPATA17Q96L03 361 aa15.52■□□□□ 0.08
SF3B5-201ENST00000367569 HINFPQ9BQA5 517 aa15.52■□□□□ 0.08
SF3B5-201ENST00000367569 GPR88Q9GZN0 384 aa15.52■□□□□ 0.08
SF3B5-201ENST00000367569 TAB2Q9NYJ8 693 aa15.52■□□□□ 0.08
SF3B5-201ENST00000367569 GMIPQ9P107 970 aa15.52■□□□□ 0.08
SF3B5-201ENST00000367569 UXTQ9UBK9 157 aaPredicted RBP15.52■□□□□ 0.08
SF3B5-201ENST00000367569 AJAP1Q9UKB5 411 aaPredicted RBP15.52■□□□□ 0.08
SF3B5-201ENST00000367569 PCDHB4Q9Y5E5 795 aa15.52■□□□□ 0.08
SF3B5-201ENST00000367569 ARNTLO00327 626 aa15.51■□□□□ 0.07
SF3B5-201ENST00000367569 DPYSL4O14531 572 aa15.51■□□□□ 0.07
SF3B5-201ENST00000367569 ZNF263O14978 683 aa15.51■□□□□ 0.07
SF3B5-201ENST00000367569 CKMP06732 381 aa15.51■□□□□ 0.07
SF3B5-201ENST00000367569 PRKCSHP14314 528 aaPredicted RBP15.51■□□□□ 0.07
SF3B5-201ENST00000367569 SLC9A1P19634 815 aa15.51■□□□□ 0.07
SF3B5-201ENST00000367569 AVPR1AP37288 418 aa15.51■□□□□ 0.07
SF3B5-201ENST00000367569 SOX9P48436 509 aa15.51■□□□□ 0.07
SF3B5-201ENST00000367569 PGFP49763 221 aa15.51■□□□□ 0.07
SF3B5-201ENST00000367569 FOXK2Q01167 660 aa15.51■□□□□ 0.07
SF3B5-201ENST00000367569 STX1AQ16623 288 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms