RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 NCF1CA8MVU1 366 aaPredicted RBP16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 PSTPIP1O43586 416 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 USP1O94782 785 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 NCF1P14598 390 aaPredicted RBP16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 RASA1P20936 1047 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 PSMA4P25789 261 aaKnown RBP16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 HNRNPH2P55795 449 aaKnown RBP16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 ZCCHC8Q6NZY4 707 aaKnown RBP16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 FAM118BQ9BPY3 351 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 ATN1P54259 1190 aaPredicted RBP16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 STX5Q13190 355 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 METTL16Q86W50 562 aaKnown RBP16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 PADI4Q9UM07 663 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 STRNO43815 780 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 PDK2Q15119 407 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 MROH9Q5TGP6 573 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 AGBL2Q5U5Z8 902 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 DENND1BQ6P3S1 775 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 SLC44A2Q8IWA5 706 aaPredicted RBP16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 GALNT4Q8N4A0 578 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 EXD1Q8NHP7 514 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 TUBGCP3Q96CW5 907 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 THTPAQ9BU02 230 aa16.25■□□□□ 0.19
NUCKS1-201ENST00000367142 OGTO15294 1046 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 ATMINO43313 823 aaPredicted RBP16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 RPS6P62753 249 aaKnown RBP16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 HLA-DQA1Q5Y7H0 255 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 MICU2Q8IYU8 434 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 LINC00116Q8NCU8 138 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 BBS2Q9BXC9 721 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 LZTS1Q9Y250 596 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 STIP1P31948 543 aaKnown RBP16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 RENBPP51606 427 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 FUT11Q495W5 492 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 GALNTL6Q49A17 601 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 SUPT7LO94864 414 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 THP07101 528 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 FXR2P51116 673 aaKnown RBP eCLIP16.24■□□□□ 0.194e-9■□□□□ 10.1
NUCKS1-201ENST00000367142 ACTN3Q08043 901 aaPredicted RBP16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 PRKAA1Q13131 559 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 VN1R5Q7Z5H4 357 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 ERO1BQ86YB8 467 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 KANSL3Q9P2N6 904 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 NCKAP1Q9Y2A7 1128 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 CAMTA2O94983 1202 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 PTPN3P26045 913 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 MTA1Q13330 715 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 CCDC81Q6ZN84 652 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 SLFN11Q7Z7L1 901 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 ZNF34Q8IZ26 560 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 RSPH1Q8WYR4 309 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 SGF29Q96ES7 293 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 SEPT3Q9UH03 358 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 DCDC2Q9UHG0 476 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 GNG14A0A1W2PPG7 69 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 ATP6V1C1P21283 382 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 BCAT1P54687 386 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 LRRC36Q1X8D7 754 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 CSGALNACT1Q8TDX6 532 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 AHCYL2Q96HN2 611 aaKnown RBP16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 TBC1D23Q9NUY8 699 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 CTNNAL1Q9UBT7 734 aa16.24■□□□□ 0.19
NUCKS1-201ENST00000367142 A0A1W2PQJ5 194 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 GLRA3O75311 464 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 NAMPTP43490 491 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 ACAD10Q6JQN1 1059 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 ATG9AQ7Z3C6 839 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 CCT7Q99832 543 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 ILKAPQ9H0C8 392 aaPredicted RBP16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 EPN3Q9H201 632 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 GBA2Q9HCG7 927 aaPredicted RBP16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 TLR8Q9NR97 1041 aaKnown RBP16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 A0A1B0GTH6 734 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 AMHP03971 560 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 SYTL1Q8IYJ3 562 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 MAP3K14Q99558 947 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 MFSD1Q9H3U5 465 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 RUVBL2Q9Y230 463 aaKnown RBP16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 CYP11B2P19099 503 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 MSH3P20585 1137 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 DEFB128Q7Z7B8 93 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 ZNF512BQ96KM6 892 aaPredicted RBP16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 GGT7Q9UJ14 662 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 ALDH2P05091 517 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 C4BPBP20851 252 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 HSPA13P48723 471 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 RAB27AP51159 221 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 SUGP1Q8IWZ8 645 aaKnown RBP16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 DPP10Q8N608 796 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 VPS51Q9UID3 782 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 ZNF185O15231 689 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 CPSF4O95639 269 aaKnown RBP16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 CLYBLQ8N0X4 340 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 CENPTQ96BT3 561 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 SMAD5Q99717 465 aaKnown RBP16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 RAD54BQ9Y620 910 aa16.23■□□□□ 0.19
NUCKS1-201ENST00000367142 TRIP10Q15642 601 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 CDK20Q8IZL9 346 aa16.22■□□□□ 0.19
NUCKS1-201ENST00000367142 CYP4Z2PQ8N1L4 340 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms